Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0158 Trochodendron aralioides HOM05D002746 ORTHO05D003037 7.2e-50 200.3 102 100.0
TAR636G2586 Trochodendron aralioides HOM05D002746 ORTHO05D003037 7.7e-36 153.7 90 90.0
TAR369G0776 Trochodendron aralioides HOM05D002746 ORTHO05D003037 1.2e-17 93.2 85 62.4
Ciclev10028947m.g Citrus clementina HOM05D002746 ORTHO05D003037 2.4e-13 79.0 76 57.9
Nn6g35239 Nelumbo nucifera HOM05D002746 ORTHO05D003037 2.4e-13 79.0 79 59.5
Haze_23708 Corylus avellana HOM05D002746 ORTHO05D003037 7.0e-13 77.4 78 56.4
Cfa010292 Carpinus fangiana HOM05D002746 ORTHO05D003037 9.2e-13 77.0 78 56.4
CSS0002034 Camellia sinensis var. sinensis HOM05D002746 ORTHO05D003037 2.0e-12 75.9 93 47.3
Lj2A1009T38 Lonicera japonica HOM05D002746 ORTHO05D003037 1.3e-11 73.2 89 48.3
Dinv36375 Davidia involucrata HOM05D002746 ORTHO05D003037 3.9e-11 71.6 91 47.3
Duzib150G0085 Durio zibethinus HOM05D002746 ORTHO05D003037 3.9e-11 71.6 90 50.0
CiPaw.13G123400 Carya illinoinensis HOM05D002746 ORTHO05D003037 6.6e-11 70.9 88 51.1
GSVIVG01016210001 Vitis vinifera HOM05D002746 ORTHO05D003037 6.6e-11 70.9 81 53.1
RcHm_v2.0_Chr5g0056951 Rosa chinensis HOM05D002746 ORTHO05D003037 2.5e-10 68.9 82 51.2
Nn2g13843 Nelumbo nucifera HOM05D002746 ORTHO05D003037 5.6e-10 67.8 80 55.0
TAR633G0282 Trochodendron aralioides HOM05D002746 ORTHO05D003037 5.6e-10 67.8 192 32.3
Thecc.09G350400 Theobroma cacao HOM05D002746 ORTHO05D003037 9.5e-10 67.0 77 51.9
MBI13_g39327_MAGBIO Magnolia biondii HOM05D002746 ORTHO05D003037 2.8e-09 65.5 83 50.6
TWI75G0416 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 6.2e-09 64.3 72 51.4
QL01p015272 Quercus lobata HOM05D002746 ORTHO05D003037 8.0e-09 63.9 88 48.9
Duzib168G1483 Durio zibethinus HOM05D002746 ORTHO05D003037 1.8e-08 62.8 64 53.1
MD11G1147400 Malus domestica HOM05D002746 ORTHO05D003037 3.1e-08 62.0 84 51.2
Potri.010G229100 Populus trichocarpa HOM05D002746 ORTHO05D003037 3.1e-08 62.0 72 50.0
Actinidia34797 Actinidia chinensis HOM05D001960 ORTHO05D004348 4.0e-08 61.6 78 46.2
FAN16G2248 Fragaria x ananassa HOM05D002746 ORTHO05D003037 4.0e-08 61.6 86 48.8
Gohir.D05G293300 Gossypium hirsutum HOM05D002746 ORTHO05D003037 5.2e-08 61.2 85 47.1
Thecc.10G087200 Theobroma cacao HOM05D002746 ORTHO05D003037 6.8e-08 60.8 88 40.9
FAN21G0473 Fragaria x ananassa HOM05D002746 ORTHO05D003037 1.5e-07 59.7 86 47.7
Hma1.2p1_0117F.1_g056370 Hydrangea macrophylla HOM05D002746 ORTHO05D003037 1.5e-07 59.7 93 45.2
Oeu046646.1 Olea europaea HOM05D002746 ORTHO05D003037 1.5e-07 59.7 81 43.2
Prupe.6G111900 Prunus persica HOM05D002746 ORTHO05D003037 2.0e-07 59.3 84 51.2
Rhsim09G0146600 Rhododendron simsii HOM05D002746 ORTHO05D003037 2.6e-07 58.9 78 44.9
TWI79G0630 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 2.6e-07 58.9 63 54.0
Atru.chr12.881 Acer truncatum HOM05D002746 ORTHO05D003037 3.4e-07 58.5 132 34.1
Dinv31245 Davidia involucrata HOM05D002746 ORTHO05D003037 3.4e-07 58.5 92 44.6
FAN25G1769 Fragaria x ananassa HOM05D002746 ORTHO05D003037 3.4e-07 58.5 86 47.7
TWI79G0510 Tripterygium wilfordii HOM05D002746 ORTHO05D003037 3.4e-07 58.5 63 54.0
Atru.chr3.3527 Acer truncatum HOM05D002746 ORTHO05D003037 4.4e-07 58.2 76 44.7
MD03G1126800 Malus domestica HOM05D002746 ORTHO05D003037 5.8e-07 57.8 86 46.5
Manes.04G013601 Manihot esculenta HOM05D002746 ORTHO05D003037 5.8e-07 57.8 78 50.0
Potri.009G006100 Populus trichocarpa HOM05D002746 ORTHO05D003037 5.8e-07 57.8 76 48.7
COL.COLO4_09863 Corchorus olitorius HOM05D002746 ORTHO05D003037 7.5e-07 57.4 88 38.6
Gorai.009G309800 Gossypium raimondii HOM05D002746 ORTHO05D003037 7.5e-07 57.4 84 45.2
PGR119G0855 Punica granatum HOM05D002746 ORTHO05D003037 7.5e-07 57.4 77 48.1
GSVIVG01031478001 Vitis vinifera HOM05D002746 ORTHO05D003037 9.8e-07 57.0 88 44.3
Duzib170G0446 Durio zibethinus HOM05D002746 ORTHO05D003037 1.3e-06 56.6 91 47.3
vmacro14395 Vaccinium macrocarpon HOM05D002746 ORTHO05D003037 1.7e-06 56.2 102 41.2
arahy.Tifrunner.gnm1.ann1.89MG53 Arachis hypogaea HOM05D002746 ORTHO05D003037 2.2e-06 55.8 80 41.2
Glyma.10G196400 Glycine max HOM05D002746 ORTHO05D003037 2.2e-06 55.8 86 41.9
Lalb_Chr21g0312871 Lupinus albus HOM05D002746 ORTHO05D003037 2.9e-06 55.5 84 40.5
Rhsim11G0027700 Rhododendron simsii HOM05D002746 ORTHO05D003037 2.9e-06 55.5 94 43.6
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 4.9e-06 54.7 88 39.8
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 4.9e-06 54.7 88 39.8
Haze_16759 Corylus avellana HOM05D002746 ORTHO05D003037 4.9e-06 54.7 65 46.2
Glyma.20G193800 Glycine max HOM05D002746 ORTHO05D003037 4.9e-06 54.7 91 40.7


User provided reference genes

Program Settings