Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 8.8e-131 470.3 240 100.0
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.2e-106 390.2 237 83.1
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.5e-106 389.8 237 85.7
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 4.8e-105 384.8 237 82.7
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 2.4e-104 382.5 237 82.3
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.2e-103 380.2 237 81.9
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 1.6e-103 379.8 237 80.2
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 2.0e-103 379.4 237 80.2
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 7.7e-103 377.5 238 82.4
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.3e-102 376.7 235 80.0
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.3e-102 376.7 238 81.1
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.3e-102 376.7 237 80.2
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 1.7e-102 376.3 235 79.6
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 3.8e-102 375.2 237 80.2
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 3.8e-102 375.2 235 79.1
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 3.8e-102 375.2 235 81.3
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.5e-101 372.5 232 79.7
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 3.2e-101 372.1 238 80.3
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 3.2e-101 372.1 237 79.3
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 5.5e-101 371.3 232 79.7
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 7.2e-101 370.9 236 80.1
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 9.5e-101 370.5 237 77.6
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 2.1e-100 369.4 237 79.7
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 2.1e-100 369.4 232 79.3
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 8.0e-100 367.5 236 80.5
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 8.0e-100 367.5 235 79.1
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.0e-99 367.1 235 78.3
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.0e-99 367.1 237 79.7
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.0e-99 367.1 237 76.8
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 1.8e-99 366.3 237 76.4
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.3e-99 365.9 237 79.3
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 4.0e-99 365.2 236 78.4
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 5.2e-99 364.8 235 78.3
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 6.8e-99 364.4 237 76.8
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 1.2e-98 363.6 235 77.9
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 1.2e-98 363.6 237 76.4
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 2.6e-98 362.5 232 75.9
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 3.4e-98 362.1 238 78.2
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 5.7e-98 361.3 237 77.2
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.7e-98 361.3 225 80.9
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 9.8e-98 360.5 237 78.5
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 9.8e-98 360.5 237 78.9
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.3e-97 360.1 237 78.9
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.7e-97 359.8 236 78.0
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.7e-97 359.8 235 77.0
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 2.2e-97 359.4 237 76.8
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 2.2e-97 359.4 236 79.2
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 2.8e-97 359.0 238 76.9
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 3.7e-97 358.6 232 75.9
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 3.7e-97 358.6 237 76.4
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 3.7e-97 358.6 236 77.5
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 4.9e-97 358.2 237 75.9
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 8.3e-97 357.5 237 76.4
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.1e-96 357.1 235 75.7
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.4e-96 356.7 236 78.0
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.4e-96 356.7 235 76.2
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.1e-96 355.5 237 77.6
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 3.1e-96 355.5 235 75.3
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.2e-95 353.6 238 76.1
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.6e-95 353.2 235 76.6
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.6e-95 353.2 236 75.0
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 2.0e-95 352.8 224 78.6
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.0e-95 352.8 236 76.3
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 2.7e-95 352.4 235 74.5
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 3.5e-95 352.1 238 75.2
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 3.5e-95 352.1 238 74.8
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 3.5e-95 352.1 237 74.7
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 4.5e-95 351.7 235 74.0
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 2.3e-94 349.4 237 73.0
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 2.9e-94 349.0 237 72.6
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 2.9e-94 349.0 237 72.6
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.9e-94 349.0 252 73.4
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 5.0e-94 348.2 237 72.6
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 5.0e-94 348.2 237 72.6
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 5.0e-94 348.2 237 72.6
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 5.0e-94 348.2 259 70.7
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 8.6e-94 347.4 237 73.0
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.5e-93 346.7 237 72.2
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 9.5e-93 344.0 236 74.2
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.2e-92 343.6 236 74.2
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 4.7e-92 341.7 236 74.6
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 8.0e-92 340.9 237 71.7
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 1.4e-91 340.1 238 72.7
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 2.3e-91 339.3 237 71.3
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 3.0e-91 339.0 235 71.5
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 4.0e-91 338.6 237 71.3
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 1.5e-90 336.7 225 73.8
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 9.8e-90 334.0 235 70.6
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.7e-89 333.2 236 72.5
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 2.9e-89 332.4 231 71.9
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 9.5e-85 317.4 236 70.3
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.2e-84 317.0 235 68.1
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.8e-83 313.2 302 56.0
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 7.8e-79 297.7 206 74.8
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 9.5e-77 290.8 193 78.2
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 9.2e-72 274.2 236 63.6
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 6.0e-71 271.6 236 62.3
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 1.0e-70 270.8 215 66.5
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 1.1e-69 267.3 174 73.0
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 4.0e-67 258.8 228 53.9
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 7.6e-66 254.6 227 53.3
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 3.8e-65 252.3 231 59.7
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 8.6e-62 241.1 222 52.3
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 7.3e-61 238.0 228 49.6
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 2.7e-55 219.5 236 48.7
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.2e-41 173.3 117 79.5
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 1.9e-37 160.2 214 42.1
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 2.5e-37 159.8 117 70.9
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 5.5e-24 115.5 92 68.5
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 5.5e-24 115.5 91 68.1
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.7e-22 108.6 71 70.4
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.2e-10 71.2 115 40.9
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 9.4e-08 61.6 38 73.7


User provided reference genes

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