Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0130 Trochodendron aralioides HOM05D004402 ORTHO05D005314 1.7e-108 396.0 197 100.0
TAR636G0918 Trochodendron aralioides HOM05D004402 ORTHO05D005314 6.2e-58 228.0 121 90.9
TAR633G1938 Trochodendron aralioides HOM05D004402 ORTHO05D005314 2.8e-50 202.6 121 82.6
Dinv35795 Davidia involucrata HOM05D004402 ORTHO05D005314 7.6e-48 194.5 121 76.9
CSS0044786 Camellia sinensis var. sinensis HOM05D004402 ORTHO05D005314 5.5e-46 188.3 121 73.6
Dinv37323 Davidia involucrata HOM05D004402 ORTHO05D005314 7.1e-46 188.0 121 73.6
Lj2C120T4 Lonicera japonica HOM05D004402 ORTHO05D005314 1.2e-45 187.2 122 75.4
vmacro01673 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 1.2e-45 187.2 121 72.7
vmacro07301 Vaccinium macrocarpon HOM05D004402 ORTHO05D005314 4.6e-45 185.3 121 72.7
QL07p043056 Quercus lobata HOM05D004402 ORTHO05D005314 1.3e-44 183.7 121 74.4
PSO801G0054 Papaver somniferum HOM05D004402 ORTHO05D005314 1.8e-44 183.3 121 73.6
GSVIVG01033653001 Vitis vinifera HOM05D004402 ORTHO05D005314 3.0e-44 182.6 122 73.0
Ciclev10011527m.g Citrus clementina HOM05D004402 ORTHO05D005314 8.7e-44 181.0 121 69.4
Rhsim03G0090600 Rhododendron simsii HOM05D004402 ORTHO05D005314 8.7e-44 181.0 121 71.1
PSO339G5499 Papaver somniferum HOM05D004402 ORTHO05D005314 3.3e-43 179.1 121 71.9
Prupe.7G128300 Prunus persica HOM05D004402 ORTHO05D005314 3.3e-43 179.1 121 72.7
Nn6g35264 Nelumbo nucifera HOM05D004402 ORTHO05D005314 9.6e-43 177.6 121 73.6
Thecc.05G068900 Theobroma cacao HOM05D004402 ORTHO05D005314 1.6e-42 176.8 121 74.4
Cfa017631 Carpinus fangiana HOM05D004402 ORTHO05D005314 2.1e-42 176.4 121 71.1
MBI17_g34762_MAGBIO Magnolia biondii HOM05D004402 ORTHO05D005314 2.8e-42 176.0 121 71.9
Atru.chr8.1786 Acer truncatum HOM05D004402 ORTHO05D005314 4.8e-42 175.3 121 70.2
Duzib093G2129 Durio zibethinus HOM05D004402 ORTHO05D005314 6.2e-42 174.9 121 72.7
ATR0910G004 Amborella trichopoda HOM05D004402 ORTHO05D005314 1.1e-41 174.1 121 71.1
MD04G1091700 Malus domestica HOM05D004402 ORTHO05D005314 1.1e-41 174.1 121 72.7
MD12G1109700 Malus domestica HOM05D004402 ORTHO05D005314 1.4e-41 173.7 121 71.9
Gorai.009G414300 Gossypium raimondii HOM05D004402 ORTHO05D005314 5.3e-41 171.8 121 71.9
arahy.Tifrunner.gnm1.ann1.DYK8MJ Arachis hypogaea HOM05D004402 ORTHO05D005314 9.0e-41 171.0 121 71.1
Glyma.19G184800 Glycine max HOM05D004402 ORTHO05D005314 1.5e-40 170.2 127 69.3
Lj1g0000599 Lotus japonicus HOM05D004402 ORTHO05D005314 1.5e-40 170.2 121 69.4
PGSC0003DMG401028184 Solanum tuberosum HOM05D004402 ORTHO05D005314 1.5e-40 170.2 121 66.1
CAN.G900.21 Capsicum annuum HOM05D004402 ORTHO05D005314 2.6e-40 169.5 121 69.4
Gohir.D04G110200 Gossypium hirsutum HOM05D004402 ORTHO05D005314 2.6e-40 169.5 121 71.1
arahy.Tifrunner.gnm1.ann1.ZWC5L9 Arachis hypogaea HOM05D004402 ORTHO05D005314 3.4e-40 169.1 121 70.2
Peaxi162Scf00311g01314 Petunia axillaris HOM05D004402 ORTHO05D005314 3.4e-40 169.1 121 66.1
Potri.006G123000 Populus trichocarpa HOM05D004402 ORTHO05D005314 3.4e-40 169.1 121 71.9
RcHm_v2.0_Chr3g0470441 Rosa chinensis HOM05D004402 ORTHO05D005314 4.5e-40 168.7 121 70.2
Sabra06G0097300 Salix brachista HOM05D004402 ORTHO05D005314 5.8e-40 168.3 121 70.2
Nitab4.5_0000578g0080 Nicotiana tabacum HOM05D004402 ORTHO05D005314 7.6e-40 167.9 121 67.8
Oeu005028.1 Olea europaea HOM05D004402 ORTHO05D005314 7.6e-40 167.9 121 69.4
Cc06_g04350 Coffea canephora HOM05D004402 ORTHO05D005314 1.0e-39 167.5 121 66.1
Oeu041487.1 Olea europaea HOM05D004402 ORTHO05D005314 1.0e-39 167.5 121 69.4
COL.COLO4_09330 Corchorus olitorius HOM05D004402 ORTHO05D005314 1.7e-39 166.8 121 70.2
FvH4_6g16530 Fragaria vesca HOM05D004402 ORTHO05D005314 1.7e-39 166.8 121 69.4
Sopen10g033410 Solanum pennellii HOM05D004402 ORTHO05D005314 1.7e-39 166.8 121 65.3
COL.COLO4_26944 Corchorus olitorius HOM05D004402 ORTHO05D005314 2.2e-39 166.4 121 68.6
Glyma.03G184200 Glycine max HOM05D004402 ORTHO05D005314 2.2e-39 166.4 121 69.4
Nitab4.5_0010955g0010 Nicotiana tabacum HOM05D004402 ORTHO05D005314 3.8e-39 165.6 121 66.9
Phvul.001G179700 Phaseolus vulgaris HOM05D004402 ORTHO05D005314 3.8e-39 165.6 121 69.4
MSTRG.10328 Avicennia marina HOM05D004402 ORTHO05D005314 5.0e-39 165.2 121 66.1
CsaV3_3G036050 Cucumis sativus L. HOM05D004402 ORTHO05D005314 8.4e-39 164.5 127 64.6
ClCG10G020050 Citrullus lanatus HOM05D004402 ORTHO05D005314 1.4e-38 163.7 127 64.6
Nitab4.5_0000063g0160 Nicotiana tabacum HOM05D004402 ORTHO05D005314 1.9e-38 163.3 121 68.6
VMungo1383G0058 Vigna mungo HOM05D004402 ORTHO05D005314 1.9e-38 163.3 122 69.7
Lalb_Chr25g0288951 Lupinus albus HOM05D004402 ORTHO05D005314 3.2e-38 162.5 121 68.6
CiPaw.10G128900 Carya illinoinensis HOM05D004402 ORTHO05D005314 7.1e-38 161.4 121 66.9
CDE10G0806 Ceratophyllum demersum HOM05D004402 ORTHO05D005314 7.1e-38 161.4 127 61.4
Lalb_Chr20g0112571 Lupinus albus HOM05D004402 ORTHO05D005314 7.1e-38 161.4 121 69.4
Manes.12G084800 Manihot esculenta HOM05D004402 ORTHO05D005314 7.1e-38 161.4 121 65.3
CAN.G488.15 Capsicum annuum HOM05D004402 ORTHO05D005314 1.2e-37 160.6 121 64.5
Sc20g0005590 Simmondsia chinensis HOM05D004402 ORTHO05D005314 1.6e-37 160.2 121 65.3
Nitab4.5_0000814g0100 Nicotiana tabacum HOM05D004402 ORTHO05D005314 2.1e-37 159.8 121 67.8
Sopen09g003130 Solanum pennellii HOM05D004402 ORTHO05D005314 2.7e-37 159.5 121 66.9
Solyc09g008310.3 Solanum lycopersicum HOM05D004402 ORTHO05D005314 7.9e-37 157.9 121 66.1
TPR.G32815 Trifolium pratense HOM05D004402 ORTHO05D005314 7.9e-37 157.9 121 70.2
CANSAT80G1177 Cannabis sativa HOM05D004402 ORTHO05D005314 1.0e-36 157.5 121 66.1
Haze_20522 Corylus avellana HOM05D004402 ORTHO05D005314 1.3e-36 157.1 150 56.7
Migut.J00646 Erythranthe guttata HOM05D004402 ORTHO05D005314 2.3e-36 156.4 121 66.1
Ca_08910_v3 Cicer arietinum L. HOM05D004402 ORTHO05D005314 3.0e-36 156.0 120 66.7
HanXRQChr14g0454821 Helianthus annuus HOM05D004402 ORTHO05D005314 3.0e-36 156.0 121 64.5
Psat3g041880 Pisum sativum HOM05D004402 ORTHO05D005314 3.0e-36 156.0 121 69.4
DCAR_015004 Daucus carota HOM05D004402 ORTHO05D005314 1.5e-35 153.7 123 67.5
Migut.L01711 Erythranthe guttata HOM05D004402 ORTHO05D005314 1.5e-35 153.7 121 66.1
ECA248G3038 Erigeron canadensis HOM05D004402 ORTHO05D005314 2.5e-35 152.9 121 63.6
TWI77G0706 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 2.5e-35 152.9 121 62.0
Medtr7g102180 Medicago truncatula HOM05D004402 ORTHO05D005314 3.3e-35 152.5 121 66.1
DCAR_017670 Daucus carota HOM05D004402 ORTHO05D005314 4.3e-35 152.1 128 60.9
Sed0020729 Sechium edule HOM05D004402 ORTHO05D005314 4.3e-35 152.1 127 61.4
HPP92_025807 Vanilla planifolia HOM05D004402 ORTHO05D005314 4.3e-35 152.1 127 59.8
TWI74G0242 Tripterygium wilfordii HOM05D004402 ORTHO05D005314 5.7e-35 151.8 121 63.6
Thhalv10013303m.g Eutrema salsugineum HOM05D004402 ORTHO05D005314 7.4e-35 151.4 121 66.9
PGR004G2373 Punica granatum HOM05D004402 ORTHO05D005314 9.7e-35 151.0 121 65.3
Aqoxy3G01670 Aquilegia oxysepala HOM05D004402 ORTHO05D005314 1.6e-34 150.2 107 69.2
BcaC03g13007 Brassica carinata HOM05D004402 ORTHO05D005314 1.6e-34 150.2 122 66.4
C02p01070 Brassica napus HOM05D004402 ORTHO05D005314 1.6e-34 150.2 122 66.4
BolC2t06097H Brassica oleracea HOM05D004402 ORTHO05D005314 1.6e-34 150.2 122 66.4
SalBow2G1223 Salvia bowleyana HOM05D004402 ORTHO05D005314 8.2e-34 147.9 121 62.8
ECA238G0572 Erigeron canadensis HOM05D004402 ORTHO05D005314 1.4e-33 147.1 127 58.3
SalBow3G3127 Salvia bowleyana HOM05D004402 ORTHO05D005314 2.4e-33 146.4 121 62.8
Aa31LG1G21720 Aethionema arabicum HOM05D004402 ORTHO05D005314 4.1e-33 145.6 121 63.6
BcaB01g05839 Brassica carinata HOM05D004402 ORTHO05D005314 5.3e-33 145.2 121 65.3
C03p01510 Brassica napus HOM05D004402 ORTHO05D005314 5.3e-33 145.2 121 65.3
BolC3t12705H Brassica oleracea HOM05D004402 ORTHO05D005314 5.3e-33 145.2 121 65.3
Lsat_1_v5_gn_1_51600 Lactuca sativa HOM05D004402 ORTHO05D005314 5.3e-33 145.2 121 62.0
A03p01170 Brassica napus HOM05D004402 ORTHO05D005314 6.9e-33 144.8 121 64.5
BraA03t09499Z Brassica rapa HOM05D004402 ORTHO05D005314 1.2e-32 144.1 121 64.5
EL10Ac7g16646 Beta vulgaris HOM05D004402 ORTHO05D005314 1.5e-32 143.7 121 61.2
BcaB01g05821 Brassica carinata HOM05D004402 ORTHO05D005314 1.5e-32 143.7 121 63.6
Eucgr.K02925 Eucalyptus grandis HOM05D004402 ORTHO05D005314 1.5e-32 143.7 121 62.0
BcaC06g32058 Brassica carinata HOM05D004402 ORTHO05D005314 2.0e-32 143.3 121 64.5
BcaC06g32061 Brassica carinata HOM05D004402 ORTHO05D005314 2.0e-32 143.3 121 64.5
A10p32580 Brassica napus HOM05D004402 ORTHO05D005314 2.0e-32 143.3 121 64.5
C09p73380 Brassica napus HOM05D004402 ORTHO05D005314 2.0e-32 143.3 121 64.5
BolC9t60074H Brassica oleracea HOM05D004402 ORTHO05D005314 2.0e-32 143.3 121 64.5
BraA10t45293Z Brassica rapa HOM05D004402 ORTHO05D005314 2.0e-32 143.3 121 64.5
Carub.0006s0224 Capsella rubella HOM05D004402 ORTHO05D005314 2.0e-32 143.3 121 62.0
Sp6g39310 Schrenkiella parvula HOM05D004402 ORTHO05D005314 2.0e-32 143.3 120 65.0
Solyc10g083960.2 Solanum lycopersicum HOM05D004402 ORTHO05D005314 4.5e-32 142.1 107 63.6
BcaB05g21840 Brassica carinata HOM05D004402 ORTHO05D005314 5.9e-32 141.7 121 61.2
BraA02t04760Z Brassica rapa HOM05D004402 ORTHO05D005314 5.9e-32 141.7 123 64.2
Actinidia28911 Actinidia chinensis HOM05D004402 ORTHO05D005314 1.0e-31 141.0 116 62.9
AT5G03430 Arabidopsis thaliana HOM05D004402 ORTHO05D005314 1.0e-31 141.0 121 61.2
Nn2g13812 Nelumbo nucifera HOM05D004402 ORTHO05D005314 1.0e-31 141.0 106 70.8
Zm00001eb333440 Zea mays HOM05D004402 ORTHO05D005314 1.0e-31 141.0 127 55.9
SGA_v2.0_scaffold75G24834 Striga asiatica HOM05D004402 ORTHO05D005314 1.7e-31 140.2 121 61.2
THA.LOC104823232 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 1.7e-31 140.2 121 60.3
AL6G12780 Arabidopsis lyrata HOM05D004402 ORTHO05D005314 2.2e-31 139.8 121 61.2
AUR62026916 Chenopodium quinoa HOM05D004402 ORTHO05D005314 2.2e-31 139.8 121 57.9
AUR62042064 Chenopodium quinoa HOM05D004402 ORTHO05D005314 2.2e-31 139.8 121 57.9
CARHR209910 Cardamine hirsuta HOM05D004402 ORTHO05D005314 6.5e-31 138.3 121 62.0
THA.LOC104826918 Tarenaya hassleriana HOM05D004402 ORTHO05D005314 8.5e-31 137.9 121 61.2
Gohir.A04G071600 Gossypium hirsutum HOM05D004402 ORTHO05D005314 1.9e-30 136.7 103 68.0
SEGI_14784 Sequoiadendron giganteum HOM05D004402 ORTHO05D005314 3.2e-30 136.0 107 65.4
Peaxi162Scf00722g00015 Petunia axillaris HOM05D004402 ORTHO05D005314 5.1e-28 128.6 100 64.0
FAN09G4748 Fragaria x ananassa HOM05D004402 ORTHO05D005314 2.0e-27 126.7 104 63.5
FAN05G1679 Fragaria x ananassa HOM05D004402 ORTHO05D005314 3.3e-27 125.9 104 63.5
FAN05G2520 Fragaria x ananassa HOM05D004402 ORTHO05D005314 3.3e-27 125.9 104 63.5
FAN14G0478 Fragaria x ananassa HOM05D004402 ORTHO05D005314 3.3e-27 125.9 104 63.5
FAN02G2572 Fragaria x ananassa HOM05D004402 ORTHO05D005314 1.7e-26 123.6 104 62.5
MELO3C009365.2 Cucumis melo HOM05D004402 ORTHO05D005314 6.3e-26 121.7 106 61.3
SHI12325 Sapria himalayana HOM05D004402 ORTHO05D005314 1.1e-25 120.9 124 51.6
SMO146G0130 Selaginella moellendorffii HOM05D004402 ORTHO05D005314 1.4e-22 110.5 138 45.7
Mapoly0054s0056 Marchantia polymorpha HOM05D004402 ORTHO05D005314 1.9e-22 110.2 147 44.2
unitig_60.g25815 Utricularia gibba HOM05D004402 ORTHO05D005314 1.9e-22 110.2 107 55.1
AagrBONN_evm.TU.Sc2ySwM_362.2690 Anthoceros agrestis HOM05D004402 ORTHO05D005314 7.9e-21 104.8 127 48.0
TAR636G0069 Trochodendron aralioides HOM05D004402 ORTHO05D005314 5.1e-20 102.1 130 46.2
Ah.08g211550 Amaranthus hybridus HOM05D004402 ORTHO05D005314 2.6e-19 99.8 98 54.1
Hund20335 Selenicereus undatus HOM05D004402 ORTHO05D005314 3.3e-19 99.4 127 44.1
Zm00001eb128460 Zea mays HOM05D004402 ORTHO05D005314 1.9e-14 83.6 67 62.7
Zm00001eb127890 Zea mays HOM05D004402 ORTHO05D005314 1.3e-10 70.9 67 56.7
Cre13.g592500 Chlamydomonas reinhardtii HOM05D004402 ORTHO05D005314 1.0e-07 61.2 64 50.0
SalBow3G0082 Salvia bowleyana HOM05D004402 ORTHO05D005314 5.0e-07 58.9 51 54.9
SalBow3G2408 Salvia bowleyana HOM05D004402 ORTHO05D005314 5.0e-07 58.9 51 54.9
Lsat_1_v5_gn_6_17200 Lactuca sativa HOM05D004402 ORTHO05D005314 1.1e-06 57.8 68 45.6


User provided reference genes

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