Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0102 Trochodendron aralioides HOM05D006877 ORTHO05D008735 3.2e-58 228.4 133 100.0
TAR381G0744 Trochodendron aralioides HOM05D006877 ORTHO05D008735 1.8e-16 89.7 51 88.2
Aqoxy3G02132 Aquilegia oxysepala HOM05D006877 ORTHO05D008735 4.3e-10 68.6 72 51.4
MBI04_g20982_MAGBIO Magnolia biondii HOM05D006877 ORTHO05D008735 4.3e-10 68.6 74 51.4
Hma1.2p1_0758F.1_g213710 Hydrangea macrophylla HOM05D006877 ORTHO05D008735 1.2e-09 67.0 69 50.7
Nn1g01910 Nelumbo nucifera HOM05D006877 ORTHO05D008735 6.1e-09 64.7 53 58.5
Dinv17258 Davidia involucrata HOM05D006877 ORTHO05D008735 1.0e-08 63.9 53 58.5
DCAR_020407 Daucus carota HOM05D006877 ORTHO05D008735 1.8e-08 63.2 50 62.0
PSO063G6761 Papaver somniferum HOM05D006877 ORTHO05D008735 2.3e-08 62.8 83 42.2
Sc25g0001210 Simmondsia chinensis HOM05D006877 ORTHO05D008735 2.3e-08 62.8 52 55.8
Cc03_g15580 Coffea canephora HOM05D006877 ORTHO05D008735 3.1e-08 62.4 58 51.7
CAN.G1131.10 Capsicum annuum HOM05D006877 ORTHO05D008735 4.4e-07 58.5 91 39.6
Nitab4.5_0000021g0490 Nicotiana tabacum HOM05D006877 ORTHO05D008735 4.4e-07 58.5 56 50.0
Sopen03g027750 Solanum pennellii HOM05D006877 ORTHO05D008735 7.5e-07 57.8 56 50.0
PGSC0003DMG400003143 Solanum tuberosum HOM05D006877 ORTHO05D008735 7.5e-07 57.8 56 50.0
Nitab4.5_0011357g0010 Nicotiana tabacum HOM05D006877 ORTHO05D008735 2.9e-06 55.8 56 50.0
Peaxi162Scf00745g00840 Petunia axillaris HOM05D006877 ORTHO05D008735 2.9e-06 55.8 91 39.6
Potri.019G049400 Populus trichocarpa HOM05D006877 ORTHO05D008735 2.9e-06 55.8 58 50.0
CDE03G0296 Ceratophyllum demersum HOM05D006877 ORTHO05D008735 3.7e-06 55.5 57 47.4
Thecc.05G213300 Theobroma cacao HOM05D006877 ORTHO05D008735 3.7e-06 55.5 72 43.1
CiPaw.05G220200 Carya illinoinensis HOM05D006877 ORTHO05D008735 4.9e-06 55.1 58 50.0
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 4.9e-06 55.1 50 56.0
Sabra19G0059000 Salix brachista HOM05D006877 ORTHO05D008735 4.9e-06 55.1 58 48.3
TWI39G0452 Tripterygium wilfordii HOM05D006877 ORTHO05D008735 4.9e-06 55.1 58 43.1
RcHm_v2.0_Chr1g0384191 Rosa chinensis HOM05D006877 ORTHO05D008735 6.4e-06 54.7 51 49.0
Manes.09G127200 Manihot esculenta HOM05D006877 ORTHO05D008735 8.3e-06 54.3 94 38.3


User provided reference genes

Program Settings