Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 3.3e-143 512.3 398 100.0
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.7e-110 403.7 262 80.9
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 1.8e-64 250.8 211 60.2
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 3.1e-64 250.0 250 55.6
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 9.0e-64 248.4 208 58.7
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 2.1e-60 237.3 208 58.7
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 8.7e-59 231.9 202 58.4
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 8.7e-59 231.9 202 58.4
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 9.6e-58 228.4 204 57.8
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 8.1e-57 225.3 199 55.3
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 1.5e-55 221.1 227 51.5
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 5.8e-55 219.2 249 48.6
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 7.6e-55 218.8 202 56.4
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 2.2e-54 217.2 215 52.6
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 6.5e-54 215.7 190 58.4
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 3.2e-53 213.4 217 51.6
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 2.1e-52 210.7 216 48.1
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 2.1e-52 210.7 207 52.7
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 8.7e-51 205.3 216 48.1
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 1.9e-50 204.1 203 55.2
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 3.3e-50 203.4 202 52.0
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 9.6e-50 201.8 196 53.1
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 2.1e-49 200.7 185 56.8
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 8.2e-49 198.7 206 51.0
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.1e-48 198.4 210 52.9
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 3.4e-47 193.4 201 50.2
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 1.7e-46 191.0 214 50.5
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 1.7e-46 191.0 202 48.5
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 1.2e-44 184.9 203 48.8
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 2.1e-44 184.1 203 48.3
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 2.1e-44 184.1 255 44.7
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 6.7e-43 179.1 200 50.5
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 4.3e-42 176.4 216 47.2
PSO339G5345 Papaver somniferum HOM05D007281 ORTHO05D009241 5.7e-42 176.0 229 45.4
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 2.2e-41 174.1 167 51.5
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 8.2e-41 172.2 219 43.8
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 8.2e-41 172.2 199 47.2
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 1.1e-40 171.8 204 49.0
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 3.1e-40 170.2 204 48.0
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 7.7e-39 165.6 173 50.3
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 8.5e-38 162.2 184 45.1
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 5.5e-37 159.5 197 45.7
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 7.2e-37 159.1 184 46.2
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 9.4e-37 158.7 219 42.0
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 1.0e-35 155.2 182 44.5
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 1.4e-35 154.8 182 44.5
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 2.3e-35 154.1 228 39.9
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 3.9e-35 153.3 191 42.9
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 3.9e-35 153.3 189 48.1
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 5.1e-35 152.9 191 42.9
CsaV3_1G014130 Cucumis sativus L. HOM05D007281 ORTHO05D009241 1.1e-34 151.8 218 40.8
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 9.7e-34 148.7 186 45.2
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 1.3e-33 148.3 214 41.1
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 3.7e-33 146.7 197 43.7
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 6.3e-33 146.0 190 44.7
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 1.1e-32 145.2 213 39.9
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 3.1e-32 143.7 193 42.0
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 6.9e-32 142.5 190 41.1
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 6.9e-32 142.5 178 43.8
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 9.1e-32 142.1 189 41.3
vmacro09292 Vaccinium macrocarpon HOM05D007281 ORTHO05D009241 1.2e-31 141.7 144 54.9
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 3.4e-31 140.2 188 42.6
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 3.8e-30 136.7 137 51.8
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 3.8e-30 136.7 190 41.6
Psat5g268080 Pisum sativum HOM05D007281 ORTHO05D009241 2.5e-29 134.0 191 43.5
Medtr2g090030 Medicago truncatula HOM05D007281 ORTHO05D009241 2.1e-28 131.0 221 38.0
Medtr2g007050 Medicago truncatula HOM05D007281 ORTHO05D009241 3.6e-28 130.2 221 38.0
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 6.1e-28 129.4 183 47.0
AL1G23070 Arabidopsis lyrata HOM05D007281 ORTHO05D009241 1.4e-27 128.3 180 44.4
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 1.4e-27 128.3 176 40.9
HPP92_019763 Vanilla planifolia HOM05D007281 ORTHO05D009241 1.8e-27 127.9 179 41.3
Phvul.005G107600 Phaseolus vulgaris HOM05D007281 ORTHO05D009241 6.7e-27 125.9 201 44.8
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 8.8e-27 125.6 185 42.2
TPR.G27076 Trifolium pratense HOM05D007281 ORTHO05D009241 2.0e-26 124.4 191 40.3
THA.LOC104809493 Tarenaya hassleriana HOM05D007281 ORTHO05D009241 2.2e-25 120.9 156 44.2
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 2.8e-25 120.6 141 46.8
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 3.7e-25 120.2 180 41.7
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 8.2e-25 119.0 178 41.0
ATR1127G094 Amborella trichopoda HOM05D007281 ORTHO05D009241 1.8e-24 117.9 161 41.6
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 1.8e-24 117.9 174 41.4
C05p11270 Brassica napus HOM05D007281 ORTHO05D009241 3.1e-24 117.1 157 44.6
BolC5t29876H Brassica oleracea HOM05D007281 ORTHO05D009241 3.1e-24 117.1 157 44.6
Aa31LG1G2830 Aethionema arabicum HOM05D007281 ORTHO05D009241 4.1e-24 116.7 239 37.2
A06p09560 Brassica napus HOM05D007281 ORTHO05D009241 1.2e-23 115.2 157 42.7
Migut.M00334 Erythranthe guttata HOM05D007281 ORTHO05D009241 1.3e-22 111.7 161 36.6
CARHR012220 Cardamine hirsuta HOM05D007281 ORTHO05D009241 3.2e-21 107.1 179 41.9
BcaC05g25243 Brassica carinata HOM05D007281 ORTHO05D009241 1.6e-20 104.8 173 39.9
Os05g0481800 Oryza sativa ssp. japonica HOM05D007281 ORTHO05D009241 5.2e-19 99.8 156 37.2
Zm00001eb290940 Zea mays HOM05D007281 ORTHO05D009241 5.2e-19 99.8 128 41.4
MD17G1084400 Malus domestica HOM05D007281 ORTHO05D009241 1.5e-18 98.2 132 40.2
Eucgr.A01777 Eucalyptus grandis HOM05D007281 ORTHO05D009241 1.7e-17 94.7 98 52.0
FvH4_6g24020 Fragaria vesca HOM05D007281 ORTHO05D009241 6.3e-17 92.8 133 40.6
FAN14G1737 Fragaria x ananassa HOM05D007281 ORTHO05D009241 6.3e-17 92.8 133 40.6
Prupe.3G231200 Prunus persica HOM05D007281 ORTHO05D009241 4.1e-16 90.1 134 38.1
FAN14G4544 Fragaria x ananassa HOM05D007281 ORTHO05D009241 7.0e-16 89.4 133 39.8
FvH4_6g44590 Fragaria vesca HOM05D007281 ORTHO05D009241 1.2e-15 88.6 133 39.1
FAN02G4278 Fragaria x ananassa HOM05D007281 ORTHO05D009241 1.6e-15 88.2 132 39.4
AT1G11900 Arabidopsis thaliana HOM05D007281 ORTHO05D009241 2.0e-15 87.8 152 38.8
Sopen07g028580 Solanum pennellii HOM05D007281 ORTHO05D009241 2.7e-15 87.4 127 41.7
Nn2g14540 Nelumbo nucifera HOM05D007281 ORTHO05D009241 8.5e-14 82.4 76 56.6
RcHm_v2.0_Chr1g0342741 Rosa chinensis HOM05D007281 ORTHO05D009241 2.5e-13 80.9 123 39.0
Nn1g08105 Nelumbo nucifera HOM05D007281 ORTHO05D009241 1.4e-11 75.1 66 57.6
Glyma.12G201200 Glycine max HOM05D007281 ORTHO05D009241 1.8e-11 74.7 74 54.1
PSO063G4946 Papaver somniferum HOM05D000034 ORTHO05D000037 4.5e-07 60.1 34 76.5
CDE04G1271 Ceratophyllum demersum HOM05D007281 ORTHO05D009241 1.0e-06 58.9 60 50.0
PSO478G0310 Papaver somniferum HOM05D000034 ORTHO05D000277 1.3e-06 58.5 34 73.5


User provided reference genes

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