Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.3e-74 281.6 137 100.0
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 2.2e-62 242.3 136 86.0
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 7.1e-61 237.3 134 86.6
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.3e-59 232.3 138 81.2
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 3.0e-59 231.9 138 79.7
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.5e-58 229.6 136 79.4
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 1.9e-58 229.2 136 80.1
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 1.9e-58 229.2 135 80.7
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 2.5e-58 228.8 136 79.4
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.3e-58 228.4 136 81.6
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 7.4e-58 227.3 135 80.7
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 7.4e-58 227.3 135 80.7
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 9.6e-58 226.9 136 80.1
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 9.6e-58 226.9 132 82.6
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.8e-57 225.3 135 80.0
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 6.2e-57 224.2 137 78.8
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 6.2e-57 224.2 136 77.9
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 1.1e-56 223.4 138 79.0
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.4e-56 222.2 136 77.9
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 3.1e-56 221.9 134 78.4
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 3.1e-56 221.9 136 77.2
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 4.0e-56 221.5 137 78.8
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 5.3e-56 221.1 138 77.5
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 9.0e-56 220.3 138 79.0
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 9.0e-56 220.3 137 78.8
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 9.0e-56 220.3 131 81.7
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 2.0e-55 219.2 137 76.6
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 2.0e-55 219.2 139 77.0
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 2.0e-55 219.2 136 76.5
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 2.6e-55 218.8 138 76.1
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.6e-55 218.8 136 79.4
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 3.4e-55 218.4 140 75.7
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 3.4e-55 218.4 141 75.9
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.4e-55 218.4 136 77.9
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 4.5e-55 218.0 138 76.8
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 5.8e-55 217.6 137 77.4
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.0e-54 216.9 136 77.9
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 1.3e-54 216.5 139 76.3
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.7e-54 216.1 138 78.3
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 1.7e-54 216.1 136 75.0
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 2.2e-54 215.7 138 76.8
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 2.2e-54 215.7 138 77.5
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 3.8e-54 214.9 142 74.6
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 3.8e-54 214.9 137 76.6
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 3.8e-54 214.9 138 76.1
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 4.9e-54 214.5 138 74.6
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 6.5e-54 214.2 137 75.9
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 8.4e-54 213.8 141 75.9
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.1e-53 213.4 138 74.6
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.1e-53 213.4 136 72.8
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.9e-53 212.6 138 78.3
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.9e-53 212.6 135 74.8
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 1.9e-53 212.6 136 75.7
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 2.5e-53 212.2 137 75.9
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 2.5e-53 212.2 137 75.9
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 2.5e-53 212.2 136 76.5
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 5.5e-53 211.1 135 74.1
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 9.3e-53 210.3 138 73.9
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 9.3e-53 210.3 136 78.7
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.7e-52 208.8 133 72.2
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 4.6e-52 208.0 136 72.8
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 1.0e-51 206.8 118 83.9
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 2.3e-51 205.7 118 82.2
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 2.3e-51 205.7 135 72.6
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 2.3e-51 205.7 135 72.6
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 3.0e-51 205.3 136 72.1
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 8.7e-51 203.8 139 73.4
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 8.7e-51 203.8 138 71.0
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.1e-50 203.4 136 69.9
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.9e-50 202.6 132 72.7
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.2e-49 199.1 136 69.1
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 3.7e-49 198.4 138 73.2
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.8e-48 196.1 127 74.0
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.8e-48 196.1 127 74.0
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 2.6e-47 192.2 138 66.7
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 2.6e-47 192.2 136 70.6
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 3.4e-47 191.8 131 70.2
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 4.5e-47 191.4 121 77.7
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 4.5e-47 191.4 121 77.7
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 7.7e-47 190.7 131 70.2
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.3e-46 189.9 136 66.2
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.3e-46 189.9 136 66.2
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.3e-46 189.9 138 65.9
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.3e-46 189.9 138 68.8
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.3e-46 189.9 121 77.7
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 3.8e-46 188.3 136 65.4
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 3.8e-46 188.3 136 65.4
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 5.0e-46 188.0 106 83.0
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 6.5e-46 187.6 136 69.1
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 1.4e-45 186.4 139 67.6
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 1.9e-45 186.0 136 66.9
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 2.5e-45 185.7 139 64.0
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 2.5e-45 185.7 135 66.7
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 9.4e-45 183.7 140 64.3
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 9.4e-45 183.7 139 62.6
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.2e-44 183.3 136 66.2
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 1.2e-44 183.3 139 64.7
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 1.2e-44 183.3 124 70.2
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 1.6e-44 183.0 140 65.0
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 6.1e-44 181.0 139 64.0
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.4e-43 179.9 139 64.7
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.4e-43 179.9 127 70.1
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.8e-43 179.5 116 75.9
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 1.8e-43 179.5 140 63.6
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 5.1e-43 177.9 139 63.3
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 6.7e-43 177.6 139 63.3
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 6.7e-43 177.6 133 68.4
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-42 176.4 139 62.6
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 7.4e-42 174.1 111 76.6
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 3.7e-41 171.8 136 61.0
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 1.8e-40 169.5 134 61.9
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 4.1e-40 168.3 136 62.5
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 6.9e-40 167.5 129 65.9
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.7e-38 162.9 109 73.4
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.6e-36 155.2 122 57.4
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 1.0e-35 153.7 123 56.9
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 8.8e-35 150.6 123 55.3
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 3.3e-34 148.7 130 53.8
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 4.4e-34 148.3 111 67.6
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 1.3e-33 146.7 125 54.4
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.7e-33 146.4 119 57.1
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.7e-33 146.4 107 67.3
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 7.0e-32 141.0 95 71.6
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 9.1e-32 140.6 92 70.7
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 7.7e-31 137.5 86 73.3
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 5.5e-29 131.3 93 66.7
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 8.0e-28 127.5 123 49.6
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.3e-25 120.2 83 68.7
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 2.6e-23 112.5 92 62.0
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 5.3e-16 88.2 53 75.5
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 7.7e-15 84.3 87 54.0
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.2e-07 60.5 48 60.4


User provided reference genes

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