Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 9.3e-212 740.0 375 100.0
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 5.1e-210 734.2 375 98.9
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 1.0e-173 613.6 387 82.4
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.8e-170 602.8 385 81.0
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 2.0e-169 599.4 370 83.2
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 4.4e-169 598.2 388 79.6
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 9.7e-169 597.0 370 82.7
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.3e-168 596.7 388 79.4
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 2.2e-168 595.9 387 80.9
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.8e-168 595.5 380 77.9
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.4e-167 593.2 374 79.7
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 1.8e-167 592.8 388 78.9
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 2.4e-167 592.4 384 78.4
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 9.1e-167 590.5 377 80.6
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 2.6e-166 589.0 381 78.5
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 4.5e-166 588.2 369 80.8
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 5.9e-166 587.8 381 78.2
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 1.7e-165 586.3 386 78.0
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 1.7e-165 586.3 384 78.6
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 1.7e-165 586.3 384 78.6
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 3.8e-165 585.1 380 77.9
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 5.0e-165 584.7 373 79.9
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 1.1e-164 583.6 380 78.9
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 7.2e-164 580.9 383 77.5
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 7.2e-164 580.9 366 78.4
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 9.4e-164 580.5 388 76.5
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 9.4e-164 580.5 382 78.3
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 2.7e-163 578.9 338 85.2
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 4.7e-163 578.2 377 78.5
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 4.7e-163 578.2 376 77.7
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 6.1e-163 577.8 370 80.3
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 6.7e-162 574.3 377 78.0
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 2.0e-161 572.8 389 76.6
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 3.3e-161 572.0 356 79.5
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 3.3e-161 572.0 377 77.2
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 4.4e-161 571.6 351 82.6
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 5.7e-161 571.2 364 78.3
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 7.4e-161 570.9 351 82.3
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 2.2e-160 569.3 376 76.1
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 2.2e-160 569.3 360 80.0
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 2.2e-160 569.3 385 77.9
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 2.8e-160 568.9 375 75.7
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 2.8e-160 568.9 364 78.8
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 3.7e-160 568.5 378 78.0
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 3.7e-160 568.5 331 85.2
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 1.1e-159 567.0 393 74.8
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.1e-159 567.0 393 74.8
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 1.1e-159 567.0 344 84.0
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.4e-159 566.6 362 78.7
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.4e-159 566.6 387 76.0
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 1.4e-159 566.6 353 83.6
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.8e-159 566.2 382 75.4
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.8e-159 566.2 378 76.5
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 1.8e-159 566.2 380 76.1
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 3.1e-159 565.5 345 81.4
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 4.1e-159 565.1 380 76.3
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 5.3e-159 564.7 385 74.5
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 7.0e-159 564.3 377 76.7
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 7.0e-159 564.3 370 77.6
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 9.1e-159 563.9 355 80.8
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 9.1e-159 563.9 377 76.4
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 1.2e-158 563.5 348 82.5
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 1.2e-158 563.5 369 77.5
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.6e-158 563.1 383 76.0
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 2.6e-158 562.4 376 75.5
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 2.6e-158 562.4 354 79.7
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 3.5e-158 562.0 343 83.4
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 3.5e-158 562.0 353 79.9
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 4.5e-158 561.6 387 74.9
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 5.9e-158 561.2 355 78.9
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 7.7e-158 560.8 379 77.0
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.0e-157 560.5 370 75.9
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.9e-157 558.9 364 78.8
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.0e-157 558.1 364 78.6
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 6.5e-157 557.8 361 79.5
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 8.5e-157 557.4 360 78.1
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 8.5e-157 557.4 364 77.5
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.1e-156 557.0 364 77.5
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.1e-156 557.0 364 77.7
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.5e-156 556.6 364 77.5
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.9e-156 556.2 382 74.9
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 1.9e-156 556.2 363 77.4
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.2e-156 555.4 364 78.6
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 3.2e-156 555.4 399 72.4
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 3.2e-156 555.4 399 73.4
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 4.2e-156 555.1 373 75.3
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 7.2e-156 554.3 371 76.0
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 9.4e-156 553.9 395 71.9
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 2.1e-155 552.7 387 75.5
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 2.1e-155 552.7 387 75.5
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 3.6e-155 552.0 381 75.9
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 3.6e-155 552.0 379 75.7
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 3.6e-155 552.0 408 71.3
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 6.1e-155 551.2 346 78.6
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 6.1e-155 551.2 344 79.7
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 8.0e-155 550.8 342 79.8
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.0e-154 550.4 353 78.2
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 2.3e-154 549.3 353 77.9
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 5.2e-154 548.1 377 74.3
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 8.8e-154 547.4 362 77.9
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 8.8e-154 547.4 339 79.9
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 4.4e-153 545.0 324 82.4
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 5.7e-153 544.7 357 75.6
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 7.5e-153 544.3 334 80.8
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 4.8e-152 541.6 341 79.5
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 8.3e-152 540.8 352 76.7
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 1.4e-151 540.0 387 74.2
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 7.0e-151 537.7 358 77.4
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 7.0e-151 537.7 384 74.0
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 2.0e-150 536.2 474 60.8
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 2.7e-150 535.8 347 76.7
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 3.5e-150 535.4 387 73.6
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 3.5e-150 535.4 387 73.6
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 1.7e-149 533.1 366 74.3
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 5.0e-149 531.6 358 76.0
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 3.2e-148 528.9 351 74.9
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 3.2e-148 528.9 351 74.1
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 4.2e-148 528.5 351 74.6
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 5.5e-148 528.1 302 84.8
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 7.2e-148 527.7 315 81.6
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 6.8e-146 521.2 352 73.6
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 8.8e-146 520.8 357 74.5
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 2.8e-144 515.8 357 73.7
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 4.2e-140 501.9 305 80.0
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 8.0e-139 497.7 392 67.9
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 3.0e-138 495.7 386 69.7
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 4.0e-138 495.4 294 83.7
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 1.2e-137 493.8 384 69.5
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 1.2e-137 493.8 355 71.0
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.0e-137 493.0 369 72.4
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 6.3e-136 488.0 331 74.3
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 5.0e-133 478.4 356 70.2
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 5.6e-132 474.9 348 72.4
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 4.0e-130 468.8 278 82.0
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 4.9e-128 461.8 309 77.0
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 8.3e-128 461.1 349 64.2
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 7.0e-127 458.0 323 67.2
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 6.0e-126 454.9 255 86.7
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 2.1e-123 446.4 357 61.1
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.1e-123 446.4 311 67.8
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.1e-122 444.1 352 61.9
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 9.2e-119 431.0 357 63.3
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 3.5e-118 429.1 376 61.4
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 3.9e-117 425.6 314 65.6
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 6.8e-114 414.8 417 56.6
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 3.4e-113 412.5 335 60.3
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.4e-111 407.1 372 60.5
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 6.0e-110 401.7 221 88.2
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 3.9e-101 372.5 231 79.2
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 1.5e-92 344.0 335 53.1
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 2.1e-91 340.1 248 74.6
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 7.6e-89 331.6 227 69.2
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 3.0e-69 266.5 356 47.8
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 1.9e-68 263.8 150 84.7
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 9.7e-60 235.0 197 60.4
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 9.4e-55 218.4 170 68.2
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 6.3e-43 179.1 164 55.5
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 3.7e-35 153.3 94 81.9
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 1.2e-28 131.7 308 32.8
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 2.0e-28 131.0 100 65.0
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 2.8e-27 127.1 335 30.4
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 9.5e-23 112.1 318 28.0
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 5.2e-21 106.3 243 34.2
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 5.7e-20 102.8 65 73.8
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 5.7e-20 102.8 66 80.3
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 5.7e-20 102.8 66 80.3
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 2.2e-19 100.9 66 80.3
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 4.1e-18 96.7 79 67.1
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 1.5e-15 88.2 59 69.5
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 4.3e-15 86.7 377 24.7
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 5.6e-15 86.3 75 62.7
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 5.6e-15 86.3 76 64.5
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 5.4e-10 69.7 108 33.3
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 3.5e-09 67.0 33 90.9
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 3.9e-08 63.5 41 73.2
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 6.6e-08 62.8 41 70.7
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 1.1e-07 62.0 39 74.4
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 1.9e-07 61.2 35 80.0
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 1.6e-06 58.2 50 60.0


User provided reference genes

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