Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2811 Trochodendron aralioides HOM05D001069 ORTHO05D007586 1.1e-31 139.4 73 100.0
CANSAT54G2612 Cannabis sativa HOM05D001069 ORTHO05D007586 3.1e-10 68.2 32 96.9
Oeu002656.1 Olea europaea HOM05D001069 ORTHO05D007586 8.9e-10 66.6 32 93.8
Sabra13G0038600 Salix brachista HOM05D000002 ORTHO05D000001 8.9e-10 66.6 37 86.5
SGA_v2.0_scaffold5G02970 Striga asiatica HOM05D001069 ORTHO05D007586 8.9e-10 66.6 31 96.8
HanXRQChr16g0514711 Helianthus annuus HOM05D001069 ORTHO05D007586 1.2e-09 66.2 31 96.8
PSO210G4375 Papaver somniferum HOM05D001069 ORTHO05D007586 1.2e-09 66.2 32 93.8
Rhsim07G0074100 Rhododendron simsii HOM05D001069 ORTHO05D007586 1.2e-09 66.2 31 96.8
arahy.Tifrunner.gnm1.ann1.JAH3YR Arachis hypogaea HOM05D001069 ORTHO05D007586 1.5e-09 65.9 32 93.8
unitig_52.g17389 Utricularia gibba HOM05D001069 ORTHO05D007586 1.5e-09 65.9 31 96.8
Nn1g02583 Nelumbo nucifera HOM05D001069 ORTHO05D007586 2.0e-09 65.5 37 81.1
Peaxi162Scf00282g00417 Petunia axillaris HOM05D001069 ORTHO05D007586 2.0e-09 65.5 32 90.6
ECA233G1896 Erigeron canadensis HOM05D000316 ORTHO05D000374 2.6e-09 65.1 31 93.5
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 2.6e-09 65.1 62 54.8
arahy.Tifrunner.gnm1.ann1.SY74BB Arachis hypogaea HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
CSS0013670 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
CSS0018717 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
Cfa006409 Carpinus fangiana HOM05D001069 ORTHO05D001549 3.4e-09 64.7 31 93.5
CiPaw.07G068400 Carya illinoinensis HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
Haze_04370 Corylus avellana HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
DCAR_006651 Daucus carota HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 96.8
Duzib128G0644 Durio zibethinus HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
Migut.B01094 Erythranthe guttata HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
Glyma.10G162900 Glycine max HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
Glyma.20G225500 Glycine max HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
HanXRQChr17g0559331 Helianthus annuus HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
Lj5g0026442 Lotus japonicus HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 90.3
Lalb_Chr21g0311011 Lupinus albus HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
Nitab4.5_0001592g0010 Nicotiana tabacum HOM05D001069 ORTHO05D007586 3.4e-09 64.7 32 90.6
Nitab4.5_0008996g0040 Nicotiana tabacum HOM05D001069 ORTHO05D007586 3.4e-09 64.7 32 90.6
Phvul.007G187900 Phaseolus vulgaris HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
Potri.005G054500 Populus trichocarpa HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
Thecc.05G281200 Theobroma cacao HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
VMungo0720G0790 Vigna mungo HOM05D001069 ORTHO05D007586 3.4e-09 64.7 31 93.5
FvH4_6g02700 Fragaria vesca HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 90.3
FAN05G3732 Fragaria x ananassa HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 90.3
FAN09G0270 Fragaria x ananassa HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 90.3
FAN14G1639 Fragaria x ananassa HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 90.3
FAN14G4385 Fragaria x ananassa HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 90.3
FAN14G5212 Fragaria x ananassa HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 90.3
Gohir.D13G107700 Gossypium hirsutum HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 90.3
Gorai.013G120600 Gossypium raimondii HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 90.3
Medtr1g080770 Medicago truncatula HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 93.5
PSO832G3124 Papaver somniferum HOM05D001069 ORTHO05D007586 4.4e-09 64.3 32 90.6
Potri.013G042100 Populus trichocarpa HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 93.5
RcHm_v2.0_Chr3g0450701 Rosa chinensis HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 90.3
TPR.G12907 Trifolium pratense HOM05D001069 ORTHO05D007586 4.4e-09 64.3 31 93.5
arahy.Tifrunner.gnm1.ann1.VQ2WN5 Arachis hypogaea HOM05D001069 ORTHO05D007586 5.8e-09 63.9 32 90.6
FAN02G3324 Fragaria x ananassa HOM05D001069 ORTHO05D007586 5.8e-09 63.9 31 90.3
arahy.Tifrunner.gnm1.ann1.AYUH3A Arachis hypogaea HOM05D001069 ORTHO05D007586 7.5e-09 63.5 31 90.3
CDE06G2591 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 7.5e-09 63.5 31 90.3
Manes.08G135700 Manihot esculenta HOM05D001069 ORTHO05D007586 7.5e-09 63.5 31 90.3
Manes.09G151800 Manihot esculenta HOM05D001069 ORTHO05D007586 7.5e-09 63.5 31 90.3
GSVIVG01036275001 Vitis vinifera HOM05D001069 ORTHO05D007586 7.5e-09 63.5 31 90.3
Gohir.A13G104300 Gossypium hirsutum HOM05D001069 ORTHO05D007586 9.8e-09 63.2 31 87.1
Lalb_Chr06g0168091 Lupinus albus HOM05D001069 ORTHO05D007586 9.8e-09 63.2 31 90.3
MBI04_g44868_MAGBIO Magnolia biondii HOM05D001069 ORTHO05D007586 9.8e-09 63.2 31 90.3
MD04G1225700 Malus domestica HOM05D001069 ORTHO05D007586 9.8e-09 63.2 31 90.3
MD12G1242900 Malus domestica HOM05D001069 ORTHO05D007586 9.8e-09 63.2 31 90.3
TAR636G2667 Trochodendron aralioides HOM05D001069 ORTHO05D001549 9.8e-09 63.2 31 90.3
ATR0665G433 Amborella trichopoda HOM05D001069 ORTHO05D007586 1.3e-08 62.8 37 75.7
MSTRG.20449 Avicennia marina HOM05D001069 ORTHO05D007586 1.3e-08 62.8 31 90.3
CAN.G134.94 Capsicum annuum HOM05D001069 ORTHO05D007586 1.3e-08 62.8 32 87.5
CDE07G0518 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 1.3e-08 62.8 30 93.3
Ca_10042_v3 Cicer arietinum L. HOM05D001069 ORTHO05D007586 1.3e-08 62.8 31 90.3
COL.COLO4_15368 Corchorus olitorius HOM05D001069 ORTHO05D007586 1.3e-08 62.8 32 87.5
Dinv20292 Davidia involucrata HOM05D001069 ORTHO05D007586 1.3e-08 62.8 31 90.3
Duzib177G1121 Durio zibethinus HOM05D001069 ORTHO05D007586 1.3e-08 62.8 31 90.3
Psat6g145040 Pisum sativum HOM05D001069 ORTHO05D007586 1.3e-08 62.8 31 90.3
Solyc01g097300.4 Solanum lycopersicum HOM05D001069 ORTHO05D007586 1.3e-08 62.8 32 87.5
Sopen01g040970 Solanum pennellii HOM05D001069 ORTHO05D007586 1.3e-08 62.8 32 87.5
PGSC0003DMG401019457 Solanum tuberosum HOM05D001069 ORTHO05D007586 1.3e-08 62.8 32 87.5
Aqoxy2G00949 Aquilegia oxysepala HOM05D001069 ORTHO05D007586 1.7e-08 62.4 32 81.2
Atru.chr2.835 Acer truncatum HOM05D001069 ORTHO05D007586 2.2e-08 62.0 31 87.1
Nn3g19512 Nelumbo nucifera HOM05D001069 ORTHO05D007586 2.2e-08 62.0 31 87.1
Prupe.6G344500 Prunus persica HOM05D001069 ORTHO05D007586 2.2e-08 62.0 31 87.1
Sabra05G0047400 Salix brachista HOM05D001069 ORTHO05D001549 2.2e-08 62.0 31 90.3
Zm00001eb051110 Zea mays HOM05D001069 ORTHO05D007586 2.2e-08 62.0 31 83.9
Zm00001eb218870 Zea mays HOM05D001069 ORTHO05D007586 2.2e-08 62.0 31 83.9
Actinidia32808 Actinidia chinensis HOM05D001069 ORTHO05D007586 3.7e-08 61.2 31 87.1
CARHR008700 Cardamine hirsuta HOM05D001069 ORTHO05D007586 3.7e-08 61.2 32 84.4
Os03g0628900 Oryza sativa ssp. japonica HOM05D001069 ORTHO05D007586 3.7e-08 61.2 31 83.9
CiPaw.08G122900 Carya illinoinensis HOM05D001069 ORTHO05D007586 4.9e-08 60.8 31 87.1
QL03p027238 Quercus lobata HOM05D001069 ORTHO05D007586 4.9e-08 60.8 31 87.1
Sed0025346 Sechium edule HOM05D001069 ORTHO05D007586 4.9e-08 60.8 31 83.9
Sp1g07420 Schrenkiella parvula HOM05D001069 ORTHO05D007586 6.4e-08 60.5 32 84.4
THA.LOC104805822 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 6.4e-08 60.5 31 87.1
AL1G19210 Arabidopsis lyrata HOM05D001069 ORTHO05D007586 8.3e-08 60.1 32 84.4
BolC8t48854H Brassica oleracea HOM05D001069 ORTHO05D007586 8.3e-08 60.1 33 78.8
Carub.0001s0812 Capsella rubella HOM05D001069 ORTHO05D007586 8.3e-08 60.1 32 84.4
ClCG02G016730 Citrullus lanatus HOM05D001069 ORTHO05D007586 1.4e-07 59.3 31 83.9
MELO3C004390.2 Cucumis melo HOM05D001069 ORTHO05D007586 1.4e-07 59.3 31 83.9
CsaV3_2G004010 Cucumis sativus L. HOM05D001069 ORTHO05D007586 1.4e-07 59.3 31 83.9
THA.LOC104823751 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 1.4e-07 59.3 31 83.9
BcaB07g34137 Brassica carinata HOM05D001069 ORTHO05D007586 1.9e-07 58.9 32 81.2
BcaC07g38446 Brassica carinata HOM05D001069 ORTHO05D007586 1.9e-07 58.9 32 78.1
C08p12160 Brassica napus HOM05D001069 ORTHO05D007586 1.9e-07 58.9 32 78.1
Eucgr.H04324 Eucalyptus grandis HOM05D001069 ORTHO05D007586 1.9e-07 58.9 31 80.6
Thhalv10009095m.g Eutrema salsugineum HOM05D001069 ORTHO05D007586 1.9e-07 58.9 32 81.2
Sc09g0003960 Simmondsia chinensis HOM05D001069 ORTHO05D007586 1.9e-07 58.9 31 80.6
AT1G08780 Arabidopsis thaliana HOM05D001069 ORTHO05D007586 2.4e-07 58.5 32 81.2
EL10Ac4g09163 Beta vulgaris HOM05D001069 ORTHO05D007586 2.4e-07 58.5 31 80.6
Mapoly0094s0008 Marchantia polymorpha HOM05D001069 ORTHO05D007586 2.4e-07 58.5 37 70.3
A08p34980 Brassica napus HOM05D001069 ORTHO05D007586 3.2e-07 58.2 32 78.1
BraA08t35409Z Brassica rapa HOM05D001069 ORTHO05D007586 3.2e-07 58.2 32 78.1
PGR004G2600 Punica granatum HOM05D001069 ORTHO05D007586 3.2e-07 58.2 31 80.6
Sed0020567 Sechium edule HOM05D001069 ORTHO05D007586 3.2e-07 58.2 32 75.0
TWI12G0612 Tripterygium wilfordii HOM05D001069 ORTHO05D007586 3.2e-07 58.2 32 78.1
Aa31sc20G40 Aethionema arabicum HOM05D001069 ORTHO05D007586 4.1e-07 57.8 32 81.2
A06p05680 Brassica napus HOM05D001069 ORTHO05D007586 4.1e-07 57.8 32 78.1
C05p06850 Brassica napus HOM05D001069 ORTHO05D007586 4.1e-07 57.8 32 78.1
BolC5t29444H Brassica oleracea HOM05D001069 ORTHO05D007586 4.1e-07 57.8 32 78.1
BraA06t23778Z Brassica rapa HOM05D001069 ORTHO05D007586 4.1e-07 57.8 32 78.1
Ciclev10029576m.g Citrus clementina HOM05D001069 ORTHO05D007586 4.1e-07 57.8 30 83.3
Cc02_g30720 Coffea canephora HOM05D001069 ORTHO05D007586 4.1e-07 57.8 31 80.6
Pp3c16_6640 Physcomitrium patens HOM05D001069 ORTHO05D007586 5.4e-07 57.4 37 70.3
SHI18422 Sapria himalayana HOM05D001069 ORTHO05D007586 5.4e-07 57.4 31 80.6
BcaNung06267 Brassica carinata HOM05D001069 ORTHO05D007586 7.0e-07 57.0 32 75.0
Hund22103 Selenicereus undatus HOM05D001069 ORTHO05D007586 7.0e-07 57.0 31 77.4
HPP92_026288 Vanilla planifolia HOM05D001069 ORTHO05D007586 7.0e-07 57.0 30 86.7
SMO356G0364 Selaginella moellendorffii HOM05D001069 ORTHO05D007586 1.6e-06 55.8 31 80.6
AagrBONN_evm.TU.Sc2ySwM_369.398 Anthoceros agrestis HOM05D001069 ORTHO05D007586 2.0e-06 55.5 29 82.8
AUR62000994 Chenopodium quinoa HOM05D001069 ORTHO05D007586 7.8e-06 53.5 31 74.2
AUR62004967 Chenopodium quinoa HOM05D001069 ORTHO05D007586 7.8e-06 53.5 31 74.2


User provided reference genes

Program Settings