Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2776 Trochodendron aralioides HOM05D003636 ORTHO05D013299 1.6e-74 282.7 145 100.0
TAR362G1191 Trochodendron aralioides HOM05D003636 ORTHO05D005160 1.3e-44 183.3 135 74.8
Nn1g02632 Nelumbo nucifera HOM05D003636 ORTHO05D005160 1.9e-43 179.5 133 68.4
Dinv44639 Davidia involucrata HOM05D003636 ORTHO05D005160 8.7e-41 170.6 132 70.5
QL02p053474 Quercus lobata HOM05D003636 ORTHO05D005160 1.9e-40 169.5 124 68.5
Lj2A972G23 Lonicera japonica HOM05D003636 ORTHO05D005160 7.3e-40 167.5 125 72.0
Haze_11308 Corylus avellana HOM05D003636 ORTHO05D005160 9.6e-40 167.2 124 69.4
Haze_11311 Corylus avellana HOM05D003636 ORTHO05D005160 2.8e-39 165.6 124 68.5
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 3.6e-39 165.2 124 67.7
TWI73G0437 Tripterygium wilfordii HOM05D003636 ORTHO05D005160 2.4e-38 162.5 127 65.4
Actinidia19047 Actinidia chinensis HOM05D003636 ORTHO05D005160 3.1e-38 162.2 128 66.4
AUR62014577 Chenopodium quinoa HOM05D003636 ORTHO05D005160 9.0e-38 160.6 122 66.4
Aqoxy2G03579 Aquilegia oxysepala HOM05D003636 ORTHO05D005160 1.2e-37 160.2 127 63.8
Hund05016 Selenicereus undatus HOM05D003636 ORTHO05D005160 1.2e-37 160.2 125 65.6
Manes.02G210300 Manihot esculenta HOM05D003636 ORTHO05D005160 1.5e-37 159.8 130 61.5
Actinidia05462 Actinidia chinensis HOM05D003636 ORTHO05D005160 2.0e-37 159.5 128 65.6
Ciclev10004361m.g Citrus clementina HOM05D003636 ORTHO05D005160 3.4e-37 158.7 122 67.2
DCAR_024229 Daucus carota HOM05D003636 ORTHO05D005160 7.6e-37 157.5 123 65.9
Cc03_g04930 Coffea canephora HOM05D003636 ORTHO05D005160 1.3e-36 156.8 115 70.4
CiPaw.02G115900 Carya illinoinensis HOM05D003636 ORTHO05D005160 1.7e-36 156.4 117 70.1
Hma1.2p1_1276F.1_g272050 Hydrangea macrophylla HOM05D003636 ORTHO05D005160 1.7e-36 156.4 116 69.8
Sc13g0005100 Simmondsia chinensis HOM05D003636 ORTHO05D005160 1.7e-36 156.4 131 62.6
Oeu002605.1 Olea europaea HOM05D003636 ORTHO05D005160 2.2e-36 156.0 124 63.7
Atru.chr4.2209 Acer truncatum HOM05D003636 ORTHO05D005160 3.8e-36 155.2 125 65.6
Nitab4.5_0001418g0070 Nicotiana tabacum HOM05D003636 ORTHO05D005160 3.8e-36 155.2 115 67.0
vmacro15411 Vaccinium macrocarpon HOM05D003636 ORTHO05D005160 3.8e-36 155.2 126 63.5
CSS0023771 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 8.4e-36 154.1 122 65.6
Peaxi162Scf00813g00221 Petunia axillaris HOM05D003636 ORTHO05D005160 8.4e-36 154.1 124 63.7
GSVIVG01018130001 Vitis vinifera HOM05D003636 ORTHO05D005160 8.4e-36 154.1 125 64.0
MD16G1209600 Malus domestica HOM05D003636 ORTHO05D005160 1.4e-35 153.3 125 63.2
Potri.001G415900 Populus trichocarpa HOM05D003636 ORTHO05D005160 1.4e-35 153.3 124 63.7
Nitab4.5_0000525g0280 Nicotiana tabacum HOM05D003636 ORTHO05D005160 1.9e-35 152.9 117 65.0
MD13G1208100 Malus domestica HOM05D003636 ORTHO05D005160 2.4e-35 152.5 127 63.0
Prupe.1G031700 Prunus persica HOM05D003636 ORTHO05D005160 3.2e-35 152.1 119 64.7
Sabra16G0282600 Salix brachista HOM05D003636 ORTHO05D005160 3.2e-35 152.1 124 62.1
AUR62039385 Chenopodium quinoa HOM05D003636 ORTHO05D005160 9.3e-35 150.6 122 62.3
Medtr1g107575 Medicago truncatula HOM05D003636 ORTHO05D005160 9.3e-35 150.6 119 65.5
Lalb_Chr21g0308481 Lupinus albus HOM05D003636 ORTHO05D005160 1.2e-34 150.2 119 66.4
RcHm_v2.0_Chr5g0000461 Rosa chinensis HOM05D003636 ORTHO05D005160 2.7e-34 149.1 124 61.3
CSS0034908 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 4.6e-34 148.3 122 63.1
MBI11_g20311_MAGBIO Magnolia biondii HOM05D003636 ORTHO05D005160 4.6e-34 148.3 129 64.3
TPR.G13854 Trifolium pratense HOM05D003636 ORTHO05D005160 4.6e-34 148.3 119 64.7
Hma1.2p1_1798F.1_g302870 Hydrangea macrophylla HOM05D003636 ORTHO05D005160 6.0e-34 147.9 124 65.3
Migut.G00443 Erythranthe guttata HOM05D003636 ORTHO05D005160 7.9e-34 147.5 115 64.3
Os03g0740700 Oryza sativa ssp. japonica HOM05D003636 ORTHO05D005160 7.9e-34 147.5 111 68.5
CANSAT11G0466 Cannabis sativa HOM05D003636 ORTHO05D005160 1.0e-33 147.1 122 60.7
Thecc.04G247000 Theobroma cacao HOM05D003636 ORTHO05D005160 1.0e-33 147.1 124 61.3
CSS0010332 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 1.3e-33 146.7 112 67.9
Ca_11090_v3 Cicer arietinum L. HOM05D003636 ORTHO05D005160 1.3e-33 146.7 119 63.9
RcHm_v2.0_Chr4g0390791 Rosa chinensis HOM05D003636 ORTHO05D005160 1.3e-33 146.7 115 64.3
THA.LOC104801942 Tarenaya hassleriana HOM05D003636 ORTHO05D005160 1.3e-33 146.7 127 60.6
CSS0030608 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 1.8e-33 146.4 116 66.4
AUR62032924 Chenopodium quinoa HOM05D003636 ORTHO05D013299 1.8e-33 146.4 125 60.8
Lsat_1_v5_gn_5_72980 Lactuca sativa HOM05D003636 ORTHO05D005160 1.8e-33 146.4 128 62.5
VMungo0720G2747 Vigna mungo HOM05D003636 ORTHO05D005160 2.3e-33 146.0 123 61.0
Glyma.10G264200 Glycine max HOM05D003636 ORTHO05D005160 5.1e-33 144.8 119 64.7
Glyma.20G126100 Glycine max HOM05D003636 ORTHO05D005160 6.7e-33 144.4 119 63.9
ATR0665G579 Amborella trichopoda HOM05D003636 ORTHO05D005160 8.7e-33 144.1 125 62.4
Phvul.007G037800 Phaseolus vulgaris HOM05D003636 ORTHO05D005160 8.7e-33 144.1 118 61.9
AUR62025056 Chenopodium quinoa HOM05D003636 ORTHO05D013299 1.1e-32 143.7 122 59.8
AUR62031665 Chenopodium quinoa HOM05D003636 ORTHO05D013299 1.1e-32 143.7 122 60.7
Solyc09g083420.3 Solanum lycopersicum HOM05D003636 ORTHO05D005160 1.1e-32 143.7 131 60.3
Sopen09g032360 Solanum pennellii HOM05D003636 ORTHO05D005160 1.1e-32 143.7 131 60.3
Ah.09g223830 Amaranthus hybridus HOM05D003636 ORTHO05D005160 1.9e-32 142.9 116 62.1
arahy.Tifrunner.gnm1.ann1.7RJ7GD Arachis hypogaea HOM05D003636 ORTHO05D005160 1.9e-32 142.9 134 57.5
CAN.G1007.10 Capsicum annuum HOM05D003636 ORTHO05D005160 1.9e-32 142.9 131 58.8
EL10Ac2g04633 Beta vulgaris HOM05D003636 ORTHO05D005160 3.3e-32 142.1 126 59.5
Lj2g0003499 Lotus japonicus HOM05D003636 ORTHO05D005160 3.3e-32 142.1 109 66.1
Ah.10g037290 Amaranthus hybridus HOM05D003636 ORTHO05D005160 4.3e-32 141.7 116 61.2
arahy.Tifrunner.gnm1.ann1.T9EQBK Arachis hypogaea HOM05D003636 ORTHO05D005160 4.3e-32 141.7 134 56.7
Carub.0002s0788 Capsella rubella HOM05D003636 ORTHO05D005160 4.3e-32 141.7 111 64.9
PGR142G0130 Punica granatum HOM05D003636 ORTHO05D005160 4.3e-32 141.7 133 59.4
Aa31LG2G11570 Aethionema arabicum HOM05D003636 ORTHO05D005160 5.6e-32 141.4 135 57.8
Lj5g0001808 Lotus japonicus HOM05D003636 ORTHO05D005160 5.6e-32 141.4 109 65.1
CARHR289840 Cardamine hirsuta HOM05D003636 ORTHO05D005160 9.6e-32 140.6 155 50.3
AL1G65900 Arabidopsis lyrata HOM05D003636 ORTHO05D005160 1.3e-31 140.2 111 64.0
MELO3C015028.2 Cucumis melo HOM05D003636 ORTHO05D005160 1.3e-31 140.2 121 58.7
PGSC0003DMG400015117 Solanum tuberosum HOM05D003636 ORTHO05D005160 1.3e-31 140.2 131 59.5
COL.COLO4_15803 Corchorus olitorius HOM05D003636 ORTHO05D005160 2.1e-31 139.4 122 61.5
PSO017G1763 Papaver somniferum HOM05D003636 ORTHO05D005160 2.8e-31 139.0 122 60.7
AT1G56290 Arabidopsis thaliana HOM05D003636 ORTHO05D005160 6.2e-31 137.9 112 61.6
CDE06G0563 Ceratophyllum demersum HOM05D003636 ORTHO05D005160 6.2e-31 137.9 119 61.3
unitig_736.g22445 Utricularia gibba HOM05D003636 ORTHO05D013299 8.1e-31 137.5 125 60.0
PSO170G0718 Papaver somniferum HOM05D003636 ORTHO05D005160 1.4e-30 136.7 122 59.8
CsaV3_5G014730 Cucumis sativus L. HOM05D003636 ORTHO05D005160 2.4e-30 136.0 121 57.0
SalBow2G0018 Salvia bowleyana HOM05D003636 ORTHO05D005160 2.4e-30 136.0 125 57.6
Sed0019602 Sechium edule HOM05D003636 ORTHO05D005160 2.4e-30 136.0 113 59.3
ECA233G4087 Erigeron canadensis HOM05D003636 ORTHO05D005160 3.1e-30 135.6 94 72.3
Gohir.D06G065300 Gossypium hirsutum HOM05D003636 ORTHO05D005160 4.0e-30 135.2 117 59.8
Gorai.010G076500 Gossypium raimondii HOM05D003636 ORTHO05D005160 4.0e-30 135.2 117 59.8
Zm00001eb056720 Zea mays HOM05D003636 ORTHO05D005160 4.0e-30 135.2 111 64.9
ATR0691G029 Amborella trichopoda HOM05D003636 ORTHO05D026550 5.3e-30 134.8 114 63.2
Gohir.A06G066800 Gossypium hirsutum HOM05D003636 ORTHO05D005160 6.9e-30 134.4 120 58.3
SGA_v2.0_scaffold101G29798 Striga asiatica HOM05D003636 ORTHO05D005160 9.0e-30 134.0 120 55.8
Cc01_g03130 Coffea canephora HOM05D003636 ORTHO05D005160 1.2e-29 133.7 123 60.2
MSTRG.4105 Avicennia marina HOM05D003636 ORTHO05D005160 1.5e-29 133.3 94 70.2
ClCG09G021970 Citrullus lanatus HOM05D003636 ORTHO05D005160 2.0e-29 132.9 125 56.8
Psat2g188720 Pisum sativum HOM05D003636 ORTHO05D005160 3.4e-29 132.1 114 60.5
Thhalv10023321m.g Eutrema salsugineum HOM05D003636 ORTHO05D005160 7.6e-29 131.0 111 58.6
FvH4_4g02820 Fragaria vesca HOM05D003636 ORTHO05D005160 7.6e-29 131.0 118 60.2
FAN17G1850 Fragaria x ananassa HOM05D003636 ORTHO05D005160 7.6e-29 131.0 118 60.2
Psat0s986g0040 Pisum sativum HOM05D003636 ORTHO05D005160 7.6e-29 131.0 124 55.6
HPP92_018389 Vanilla planifolia HOM05D003636 ORTHO05D013299 1.7e-28 129.8 120 61.7
BcaC04g22040 Brassica carinata HOM05D003636 ORTHO05D005160 2.2e-28 129.4 133 54.9
BcaB07g31117 Brassica carinata HOM05D003636 ORTHO05D005160 3.8e-28 128.6 119 58.0
HanXRQChr06g0181471 Helianthus annuus HOM05D003636 ORTHO05D005160 3.8e-28 128.6 93 73.1
C09p24190 Brassica napus HOM05D003636 ORTHO05D005160 4.9e-28 128.3 133 54.9
Eucgr.G02714 Eucalyptus grandis HOM05D003636 ORTHO05D005160 4.9e-28 128.3 115 57.4
SEGI_36314 Sequoiadendron giganteum HOM05D003636 ORTHO05D005160 4.9e-28 128.3 130 58.5
A09p19180 Brassica napus HOM05D003636 ORTHO05D005160 1.4e-27 126.7 119 57.1
Duzib138G1962 Durio zibethinus HOM05D003636 ORTHO05D005160 4.6e-26 121.7 129 53.5
CSS0043760 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 8.7e-25 117.5 131 54.2
Pp3c6_28790 Physcomitrium patens HOM05D003636 ORTHO05D005160 7.4e-24 114.4 122 52.5
Rhsim02G0033400 Rhododendron simsii HOM05D003636 ORTHO05D005160 3.7e-23 112.1 125 54.4
RhsimUnG0026900 Rhododendron simsii HOM05D003636 ORTHO05D013299 1.8e-22 109.8 93 64.5
Ciclev10004498m.g Citrus clementina HOM05D003636 ORTHO05D005160 2.4e-22 109.4 114 53.5
VMungo0331G1464 Vigna mungo HOM05D003636 ORTHO05D013299 1.7e-20 103.2 107 54.2
Mapoly0080s0020 Marchantia polymorpha HOM05D003636 ORTHO05D005160 6.0e-18 94.7 136 44.1
SMO356G0642 Selaginella moellendorffii HOM05D003636 ORTHO05D005160 3.9e-17 92.0 108 50.9
arahy.Tifrunner.gnm1.ann1.6T7UPN Arachis hypogaea HOM05D003636 ORTHO05D005832 2.5e-16 89.4 64 68.8
Rhsim03G0241700 Rhododendron simsii HOM05D003636 ORTHO05D013299 5.7e-16 88.2 106 52.8
CBR_g41119 Chara braunii HOM05D003636 ORTHO05D005160 1.4e-14 83.6 137 39.4
RhsimUnG0174100 Rhododendron simsii HOM05D003636 ORTHO05D013299 1.2e-13 80.5 52 76.9
CARHR172220 Cardamine hirsuta HOM05D003636 ORTHO05D005160 1.0e-12 77.4 94 52.1
Cre17.g741550 Chlamydomonas reinhardtii HOM05D003636 ORTHO05D005160 9.4e-11 70.9 69 53.6
MELO3C029178.2 Cucumis melo HOM05D003636 ORTHO05D005160 3.0e-09 65.9 126 33.3


User provided reference genes

Program Settings