Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2665 Trochodendron aralioides HOM05D000576 ORTHO05D000368 6.0e-82 307.4 147 100.0
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.0e-57 226.9 123 87.8
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.1e-54 216.9 123 85.4
Medtr8g468470 Medicago truncatula HOM05D000576 ORTHO05D000368 1.7e-12 76.6 89 43.8
Psat4g131160 Pisum sativum HOM05D000576 ORTHO05D000368 2.9e-12 75.9 88 46.6
TPR.G33251 Trifolium pratense HOM05D000576 ORTHO05D000368 1.1e-11 73.9 115 38.3
CSS0035647 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.8e-10 69.3 107 35.5
TAR629G0101 Trochodendron aralioides HOM05D000576 ORTHO05D000368 8.0e-10 67.8 128 35.2
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.3e-09 66.2 83 43.4
Actinidia31191 Actinidia chinensis HOM05D000576 ORTHO05D000368 3.1e-09 65.9 50 54.0
TAR633G2603 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.1e-09 65.9 110 32.7
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 5.2e-09 65.1 56 50.0
FvH4_6g01850 Fragaria vesca HOM05D000576 ORTHO05D000368 6.8e-09 64.7 64 42.2
Os07g0163200 Oryza sativa ssp. japonica HOM05D000576 ORTHO05D000368 8.9e-09 64.3 58 48.3
CSS0016406 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 1.5e-08 63.5 87 40.2
RcHm_v2.0_Chr3g0449571 Rosa chinensis HOM05D000576 ORTHO05D000368 2.0e-08 63.2 74 39.2
Dinv22828 Davidia involucrata HOM05D000576 ORTHO05D000368 2.6e-08 62.8 86 39.5
CSS0001211 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 4.4e-08 62.0 87 40.2
CSS0005465 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 4.4e-08 62.0 99 34.3
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 4.4e-08 62.0 51 51.0
Dinv22832 Davidia involucrata HOM05D000576 ORTHO05D000368 5.8e-08 61.6 86 37.2
Duzib248G0036 Durio zibethinus HOM05D000576 ORTHO05D000368 5.8e-08 61.6 51 51.0
FAN05G5357 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.8e-08 61.6 64 40.6
Glyma.08G297700 Glycine max HOM05D000576 ORTHO05D000368 9.8e-08 60.8 98 35.7
Phvul.003G068100 Phaseolus vulgaris HOM05D000576 ORTHO05D000368 9.8e-08 60.8 98 36.7
Cfa001772 Carpinus fangiana HOM05D000576 ORTHO05D000368 1.7e-07 60.1 85 31.8
TWI63G0411 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.7e-07 60.1 55 45.5
Migut.C01303 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.2e-07 59.7 125 29.6
Migut.G00965 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.9e-07 59.3 53 45.3
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 3.7e-07 58.9 55 41.8
GSVIVG01017697001 Vitis vinifera HOM05D000576 ORTHO05D000368 3.7e-07 58.9 88 36.4
Nitab4.5_0005673g0030 Nicotiana tabacum HOM05D000576 ORTHO05D000368 4.9e-07 58.5 57 36.8
Prupe.3G259800 Prunus persica HOM05D000576 ORTHO05D000368 4.9e-07 58.5 96 33.3
RcHm_v2.0_Chr3g0449591 Rosa chinensis HOM05D000576 ORTHO05D000368 4.9e-07 58.5 64 35.9
COL.COLO4_22884 Corchorus olitorius HOM05D000576 ORTHO05D000368 6.4e-07 58.2 91 30.8
COL.COLO4_27089 Corchorus olitorius HOM05D000576 ORTHO05D000368 6.4e-07 58.2 91 37.4
Haze_16783 Corylus avellana HOM05D000576 ORTHO05D000368 6.4e-07 58.2 114 26.3
FAN27G2519 Fragaria x ananassa HOM05D000576 ORTHO05D013658 8.3e-07 57.8 60 36.7
Atru.chr4.3172 Acer truncatum HOM05D000576 ORTHO05D000368 1.1e-06 57.4 64 35.9
arahy.Tifrunner.gnm1.ann1.X3R901 Arachis hypogaea HOM05D000576 ORTHO05D000368 1.1e-06 57.4 52 48.1
FAN20G0097 Fragaria x ananassa HOM05D001245 ORTHO05D004475 1.1e-06 57.4 89 31.5
TWI63G0561 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.1e-06 57.4 52 44.2
TAR365G1194 Trochodendron aralioides HOM05D000576 ORTHO05D013658 1.1e-06 57.4 78 39.7
COL.COLO4_27090 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.4e-06 57.0 86 33.7
CAN.G1261.4 Capsicum annuum HOM05D000576 ORTHO05D000368 1.9e-06 56.6 108 25.0
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 1.9e-06 56.6 83 37.3
Hma1.2p1_0024F.1_g015920 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.9e-06 56.6 52 44.2
Hma1.2p1_2024F.1_g311420 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.9e-06 56.6 52 44.2
Lsat_1_v5_gn_9_62080 Lactuca sativa HOM05D000576 ORTHO05D000368 1.9e-06 56.6 55 40.0
Peaxi162Scf00066g01414 Petunia axillaris HOM05D000576 ORTHO05D000368 1.9e-06 56.6 55 45.5
arahy.Tifrunner.gnm1.ann1.7MIU5M Arachis hypogaea HOM05D000576 ORTHO05D000368 2.4e-06 56.2 101 29.7
Migut.F00694 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.4e-06 56.2 86 34.9
Rhsim02G0214100 Rhododendron simsii HOM05D000576 ORTHO05D000368 2.4e-06 56.2 87 39.1
Dinv29497 Davidia involucrata HOM05D000576 ORTHO05D000368 3.2e-06 55.8 78 32.1
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.2e-06 55.8 64 43.8
Ciclev10008279m.g Citrus clementina HOM05D000576 ORTHO05D000368 4.1e-06 55.5 46 50.0
Cc03_g00060 Coffea canephora HOM05D000576 ORTHO05D000368 4.1e-06 55.5 64 34.4
Migut.C01300 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.1e-06 55.5 125 28.0
Migut.G01093 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.1e-06 55.5 53 45.3
ClCG06G017710 Citrullus lanatus HOM05D000576 ORTHO05D000368 5.4e-06 55.1 52 44.2
Peaxi162Scf00045g01340 Petunia axillaris HOM05D000576 ORTHO05D000368 5.4e-06 55.1 55 43.6
QL10p005853 Quercus lobata HOM05D000576 ORTHO05D000368 5.4e-06 55.1 43 55.8
TWI32G0666 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 5.4e-06 55.1 46 50.0
TAR365G1029 Trochodendron aralioides HOM05D000576 ORTHO05D000368 5.4e-06 55.1 40 60.0
Atru.chr4.3173 Acer truncatum HOM05D000576 ORTHO05D000368 7.0e-06 54.7 89 32.6
Migut.J00156 Erythranthe guttata HOM05D000576 ORTHO05D013658 7.0e-06 54.7 40 52.5
Lsat_1_v5_gn_9_62120 Lactuca sativa HOM05D000576 ORTHO05D016187 7.0e-06 54.7 55 40.0
Peaxi162Scf00310g00017 Petunia axillaris HOM05D000576 ORTHO05D000368 7.0e-06 54.7 58 36.2
QL08p062492 Quercus lobata HOM05D000576 ORTHO05D000368 7.0e-06 54.7 106 30.2
Rhsim13G0226200 Rhododendron simsii HOM05D000576 ORTHO05D000368 7.0e-06 54.7 75 38.7
vmacro11253 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 7.0e-06 54.7 89 38.2
Migut.G00964 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.2e-06 54.3 53 41.5
Migut.J00162 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.2e-06 54.3 54 42.6
HanXRQChr08g0221771 Helianthus annuus HOM05D000576 ORTHO05D000368 9.2e-06 54.3 55 38.2
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 9.2e-06 54.3 55 41.8
TAR629G2683 Trochodendron aralioides HOM05D000576 ORTHO05D000368 9.2e-06 54.3 40 60.0


User provided reference genes

Program Settings