Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 3.4e-133 478.4 250 100.0
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 2.0e-117 426.0 245 88.2
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 8.3e-116 420.6 245 86.1
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 9.2e-115 417.2 244 84.8
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 1.2e-114 416.8 245 85.3
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.0e-114 416.0 245 84.9
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 4.6e-114 414.8 245 84.9
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 5.9e-114 414.5 245 85.7
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.7e-113 412.9 242 85.1
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 2.3e-113 412.5 242 85.5
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 2.3e-113 412.5 241 87.1
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 3.9e-113 411.8 245 83.7
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 6.6e-113 411.0 245 84.1
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 6.6e-113 411.0 242 85.5
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.1e-112 410.2 250 82.4
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.5e-112 409.8 242 84.7
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.5e-112 409.1 242 83.9
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 4.3e-112 408.3 242 84.7
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 7.3e-112 407.5 245 83.7
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 9.5e-112 407.1 240 85.8
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.2e-111 406.8 250 81.6
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 3.6e-111 405.2 246 82.9
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 4.7e-111 404.8 257 82.1
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 1.0e-110 403.7 245 82.0
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 2.3e-110 402.5 245 82.9
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 2.3e-110 402.5 250 80.4
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 3.1e-110 402.1 245 81.6
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 4.4e-109 398.3 245 80.4
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 5.8e-109 397.9 245 82.0
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 5.8e-109 397.9 245 80.8
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 7.5e-109 397.5 247 81.8
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 7.5e-109 397.5 245 80.4
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 7.5e-109 397.5 245 80.4
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.7e-108 396.4 245 81.2
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.7e-108 396.4 245 79.2
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 1.7e-108 396.4 247 81.0
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 2.2e-108 396.0 245 79.2
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 2.9e-108 395.6 245 79.2
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 3.7e-108 395.2 245 81.2
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 5.4e-107 391.3 243 81.1
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 5.4e-107 391.3 243 81.1
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 5.4e-107 391.3 250 78.4
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 9.2e-107 390.6 246 77.2
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 9.2e-107 390.6 246 77.2
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 9.2e-107 390.6 244 78.7
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 9.2e-107 390.6 245 80.0
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 9.2e-107 390.6 245 79.6
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 1.6e-106 389.8 245 78.0
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 2.0e-106 389.4 249 78.7
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 2.0e-106 389.4 250 78.8
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 3.5e-106 388.7 250 78.0
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 7.8e-106 387.5 247 78.1
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 1.3e-105 386.7 246 75.6
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.7e-105 386.3 247 78.5
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 6.6e-105 384.4 249 75.1
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 6.6e-105 384.4 249 75.1
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 6.6e-105 384.4 249 75.1
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 6.6e-105 384.4 249 75.5
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 1.1e-104 383.6 248 75.4
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 1.9e-104 382.9 249 75.1
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 3.3e-104 382.1 252 77.0
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 9.5e-104 380.6 246 76.4
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 9.5e-104 380.6 246 74.0
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.6e-103 379.8 248 75.8
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 2.8e-103 379.0 245 78.0
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 2.8e-103 379.0 247 78.9
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 3.6e-103 378.6 249 74.7
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 3.6e-103 378.6 245 77.1
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 4.0e-102 375.2 244 76.6
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 4.0e-102 375.2 248 75.4
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 2.6e-101 372.5 247 74.1
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 2.6e-101 372.5 245 74.7
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 3.4e-101 372.1 245 78.0
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 3.7e-100 368.6 262 72.1
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.4e-99 366.7 240 73.8
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 2.1e-98 362.8 234 76.5
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 3.5e-98 362.1 242 73.6
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 2.3e-97 359.4 250 72.0
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 3.0e-97 359.0 250 72.0
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 1.9e-96 356.3 245 73.1
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 1.2e-95 353.6 203 88.2
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 4.7e-95 351.7 248 70.2
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 4.0e-94 348.6 240 75.4
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 1.5e-93 346.7 242 69.4
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 2.6e-93 345.9 245 72.2
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.6e-93 345.9 228 77.2
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 4.4e-93 345.1 208 82.7
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 2.4e-91 339.3 213 82.2
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 5.4e-91 338.2 184 94.0
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 3.5e-90 335.5 245 66.9
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 1.3e-84 317.0 202 81.2
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 3.8e-84 315.5 200 75.5
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 3.2e-83 312.4 245 67.3
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 7.1e-83 311.2 248 65.7
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 6.2e-79 298.1 198 69.7
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.5e-77 293.5 249 64.3
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 2.6e-77 292.7 261 64.0
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 2.7e-74 282.7 242 63.6
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 7.4e-72 274.6 242 57.0
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.9e-67 260.0 242 52.5
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 5.3e-62 241.9 238 52.1
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 1.7e-60 236.9 202 65.8
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 8.4e-60 234.6 242 47.9
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 8.4e-60 234.6 239 49.8
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 1.4e-59 233.8 160 70.0
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 8.5e-52 208.0 150 69.3
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 7.2e-51 204.9 150 68.7
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 9.3e-51 204.5 158 67.1
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 3.3e-48 196.1 119 82.4
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 2.8e-47 193.0 120 81.7
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 3.7e-47 192.6 131 71.0
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 3.1e-46 189.5 156 60.3
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 4.5e-37 159.1 119 68.1
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 7.2e-35 151.8 92 80.4
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 3.9e-33 146.0 91 78.0
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 5.7e-32 142.1 223 39.0
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 2.2e-28 130.2 97 63.9
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 6.1e-18 95.5 71 64.8
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 3.4e-16 89.7 155 44.5
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 4.4e-08 62.8 38 89.5
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 6.3e-07 58.9 39 69.2


User provided reference genes

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