Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2520 Trochodendron aralioides HOM05D005842 ORTHO05D007077 1.1e-42 176.4 101 100.0
TAR362G0228 Trochodendron aralioides HOM05D005842 ORTHO05D007077 1.1e-26 123.2 90 73.3
MD13G1226500 Malus domestica HOM05D005842 ORTHO05D007077 1.4e-21 106.3 87 63.2
MD16G1231600 Malus domestica HOM05D005842 ORTHO05D007077 1.4e-21 106.3 87 63.2
PSO832G1240 Papaver somniferum HOM05D005842 ORTHO05D007077 5.3e-21 104.4 86 64.0
Nn1g03040 Nelumbo nucifera HOM05D005842 ORTHO05D007077 1.5e-20 102.8 90 63.3
Prupe.1G053900 Prunus persica HOM05D005842 ORTHO05D007077 3.4e-20 101.7 87 59.8
TWI09G0179 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 1.4e-18 96.3 90 53.3
Nn1g03041 Nelumbo nucifera HOM05D005842 ORTHO05D007077 5.5e-18 94.4 90 60.0
Migut.N00324 Erythranthe guttata HOM05D005842 ORTHO05D007077 1.2e-17 93.2 84 59.5
Hma1.2p1_0112F.1_g055010 Hydrangea macrophylla HOM05D005842 ORTHO05D007077 1.6e-17 92.8 84 59.5
Migut.H00813 Erythranthe guttata HOM05D005842 ORTHO05D007077 2.1e-17 92.4 84 58.3
Actinidia11383 Actinidia chinensis HOM05D005842 ORTHO05D007077 2.7e-17 92.0 84 58.3
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 2.7e-17 92.0 89 57.3
SHI18628 Sapria himalayana HOM05D005842 ORTHO05D007077 2.7e-17 92.0 87 55.2
Actinidia25095 Actinidia chinensis HOM05D005842 ORTHO05D007077 4.7e-17 91.3 84 58.3
Glyma.10G130600 Glycine max HOM05D005842 ORTHO05D007077 4.7e-17 91.3 85 58.8
Potri.010G062800 Populus trichocarpa HOM05D005842 ORTHO05D007077 4.7e-17 91.3 89 57.3
Dinv27137 Davidia involucrata HOM05D005842 ORTHO05D007077 6.1e-17 90.9 85 60.0
Nitab4.5_0001769g0190 Nicotiana tabacum HOM05D005842 ORTHO05D007077 6.1e-17 90.9 88 55.7
PGSC0003DMG400027164 Solanum tuberosum HOM05D005842 ORTHO05D007077 6.1e-17 90.9 83 56.6
Sabra10G0043900 Salix brachista HOM05D005842 ORTHO05D007077 7.9e-17 90.5 89 57.3
Atru.chr4.1869 Acer truncatum HOM05D005842 ORTHO05D007077 2.3e-16 89.0 89 55.1
Atru.chr4.1859_Atru.chr4.1858 Acer truncatum HOM05D005842 ORTHO05D007077 3.0e-16 88.6 89 55.1
Atru.chr4.1868 Acer truncatum HOM05D005842 ORTHO05D007077 3.0e-16 88.6 89 55.1
Ca_26210_v3 Cicer arietinum L. HOM05D005842 ORTHO05D007077 3.0e-16 88.6 90 51.1
Cc03_g06880 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-16 88.6 86 58.1
Cc03_g06890 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-16 88.6 86 58.1
Cc03_g06900 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-16 88.6 86 58.1
Cc03_g06910 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-16 88.6 86 58.1
Cc03_g06920 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-16 88.6 86 58.1
Cc03_g06930 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-16 88.6 86 58.1
Cc03_g06940 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-16 88.6 86 58.1
Cc03_g06950 Coffea canephora HOM05D005842 ORTHO05D007077 3.0e-16 88.6 86 58.1
Glyma.20G081400 Glycine max HOM05D005842 ORTHO05D007077 3.9e-16 88.2 85 56.5
THA.LOC104821628 Tarenaya hassleriana HOM05D005842 ORTHO05D007077 3.9e-16 88.2 87 55.2
Actinidia39941 Actinidia chinensis HOM05D005842 ORTHO05D007077 5.1e-16 87.8 84 57.1
Nn1g03042 Nelumbo nucifera HOM05D005842 ORTHO05D007077 5.1e-16 87.8 90 57.8
Lj6g0013781 Lotus japonicus HOM05D005842 ORTHO05D007077 1.5e-15 86.3 85 51.8
CSS0017402 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 2.6e-15 85.5 85 52.9
Nn1g03039 Nelumbo nucifera HOM05D005842 ORTHO05D007077 2.6e-15 85.5 90 56.7
CAN.G305.25 Capsicum annuum HOM05D005842 ORTHO05D007077 9.7e-15 83.6 87 56.3
Solyc09g091040.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 9.7e-15 83.6 89 56.2
Cc00_g17210 Coffea canephora HOM05D005842 ORTHO05D007077 2.8e-14 82.0 86 55.8
Sopen09g034020 Solanum pennellii HOM05D005842 ORTHO05D007077 3.7e-14 81.6 89 53.9
ATR0787G056 Amborella trichopoda HOM05D005842 ORTHO05D007077 4.8e-14 81.3 87 54.0
PGSC0003DMG404001548 Solanum tuberosum HOM05D005842 ORTHO05D007077 4.8e-14 81.3 89 55.1
PSO266G0009 Papaver somniferum HOM05D005842 ORTHO05D007077 8.2e-14 80.5 86 54.7
PSO266G0028 Papaver somniferum HOM05D005842 ORTHO05D007077 8.2e-14 80.5 86 54.7
SpUn0225_0010 Schrenkiella parvula HOM05D005842 ORTHO05D007077 8.2e-14 80.5 106 45.3
PSO210G3477 Papaver somniferum HOM05D005842 ORTHO05D007077 1.1e-13 80.1 86 53.5
PSO210G4408 Papaver somniferum HOM05D005842 ORTHO05D007077 1.1e-13 80.1 86 53.5
Phvul.007G233000 Phaseolus vulgaris HOM05D005842 ORTHO05D007077 1.1e-13 80.1 85 52.9
PSO384G5008 Papaver somniferum HOM05D005842 ORTHO05D007077 1.4e-13 79.7 86 53.5
PSO764G0017 Papaver somniferum HOM05D005842 ORTHO05D007077 1.4e-13 79.7 86 53.5
CSS0006411 Camellia sinensis var. sinensis HOM05D005842 ORTHO05D007077 1.8e-13 79.3 84 52.4
MBI10_g16785_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 1.8e-13 79.3 88 52.3
MBI10_g16786_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 1.8e-13 79.3 88 52.3
PSO384G4311 Papaver somniferum HOM05D005842 ORTHO05D007077 2.4e-13 79.0 84 54.8
Oeu007544.1 Olea europaea HOM05D005842 ORTHO05D007077 3.1e-13 78.6 63 66.7
BcaB03g16079 Brassica carinata HOM05D005842 ORTHO05D007077 4.1e-13 78.2 106 46.2
C03p53480 Brassica napus HOM05D005842 ORTHO05D007077 7.0e-13 77.4 70 57.1
Peaxi162Scf00164g00112 Petunia axillaris HOM05D005842 ORTHO05D007077 7.0e-13 77.4 70 54.3
Atru.chr13.2235 Acer truncatum HOM05D005842 ORTHO05D007077 1.2e-12 76.6 75 54.7
Dinv29780 Davidia involucrata HOM05D005842 ORTHO05D007077 4.5e-12 74.7 89 52.8
Dinv29781 Davidia involucrata HOM05D005842 ORTHO05D007077 4.5e-12 74.7 96 51.0
Lalb_Chr01g0011321 Lupinus albus HOM05D005842 ORTHO05D007077 1.0e-11 73.6 82 52.4
ClCG05G003830 Citrullus lanatus HOM05D005842 ORTHO05D007077 2.2e-11 72.4 75 49.3
arahy.Tifrunner.gnm1.ann1.JU0LD9 Arachis hypogaea HOM05D005842 ORTHO05D007077 2.9e-11 72.0 88 48.9
arahy.Tifrunner.gnm1.ann1.LRUD7W Arachis hypogaea HOM05D005842 ORTHO05D007077 2.9e-11 72.0 88 47.7
arahy.Tifrunner.gnm1.ann1.Q9KDDQ Arachis hypogaea HOM05D005842 ORTHO05D007077 6.5e-11 70.9 88 46.6
arahy.Tifrunner.gnm1.ann1.GMD4I9 Arachis hypogaea HOM05D005842 ORTHO05D007077 8.5e-11 70.5 88 47.7
BcaC02g09413 Brassica carinata HOM05D005842 ORTHO05D007077 1.5e-10 69.7 106 42.5
BcaC02g09414 Brassica carinata HOM05D005842 ORTHO05D007077 1.5e-10 69.7 106 42.5
BcaC02g09415 Brassica carinata HOM05D005842 ORTHO05D007077 1.5e-10 69.7 106 42.5
Aa31LG9G4090 Aethionema arabicum HOM05D005842 ORTHO05D007077 1.9e-10 69.3 117 38.5
Nitab4.5_0000867g0010 Nicotiana tabacum HOM05D000404 ORTHO05D001765 4.2e-10 68.2 88 47.7
A04p08620 Brassica napus HOM05D005842 ORTHO05D007077 5.5e-10 67.8 107 43.0
BraA04t16556Z Brassica rapa HOM05D005842 ORTHO05D007077 5.5e-10 67.8 107 43.0
Aqoxy5G00093 Aquilegia oxysepala HOM05D005842 ORTHO05D007077 7.2e-10 67.4 87 44.8
Cfa014832 Carpinus fangiana HOM05D005842 ORTHO05D007077 2.7e-09 65.5 109 42.2
Thhalv10026478m.g Eutrema salsugineum HOM05D005842 ORTHO05D007077 6.1e-09 64.3 106 39.6
Lalb_Chr19g0128561 Lupinus albus HOM05D005842 ORTHO05D007077 6.1e-09 64.3 61 57.4
Sopen05g031940 Solanum pennellii HOM05D005842 ORTHO05D007077 1.0e-08 63.5 83 43.4
Solyc05g053450.3 Solanum lycopersicum HOM05D005842 ORTHO05D007077 1.4e-08 63.2 83 42.2
BcaB06g26603 Brassica carinata HOM05D005842 ORTHO05D007077 1.8e-08 62.8 70 51.4
CANSAT78G1061 Cannabis sativa HOM05D005842 ORTHO05D007077 1.8e-08 62.8 98 40.8
BcaC02g09416 Brassica carinata HOM05D005842 ORTHO05D007077 2.3e-08 62.4 90 43.3
SalBow2G2733 Salvia bowleyana HOM05D005842 ORTHO05D007077 2.3e-08 62.4 80 45.0
C04p42360 Brassica napus HOM05D005842 ORTHO05D007077 3.0e-08 62.0 110 40.9
CANSAT78G1849 Cannabis sativa HOM05D005842 ORTHO05D007077 3.0e-08 62.0 98 40.8
Medtr1g045980 Medicago truncatula HOM05D005842 ORTHO05D007077 3.0e-08 62.0 133 31.6
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 4.0e-08 61.6 70 50.0
Lalb_Chr03g0036861 Lupinus albus HOM05D005842 ORTHO05D007077 4.0e-08 61.6 64 53.1
TPR.G23959 Trifolium pratense HOM05D005842 ORTHO05D007077 5.2e-08 61.2 66 51.5
Sed0010218 Sechium edule HOM05D005842 ORTHO05D007077 8.8e-08 60.5 85 40.0
AL7G43170 Arabidopsis lyrata HOM05D005842 ORTHO05D007077 1.1e-07 60.1 106 37.7
Peaxi162Scf01007g00004 Petunia axillaris HOM05D005842 ORTHO05D007077 1.1e-07 60.1 87 41.4
BcaB04g17686 Brassica carinata HOM05D005842 ORTHO05D007077 2.0e-07 59.3 106 36.8
CsaV3_2G012270 Cucumis sativus L. HOM05D005842 ORTHO05D007077 2.0e-07 59.3 95 41.1
Rhsim09G0044300 Rhododendron simsii HOM05D005842 ORTHO05D007077 2.0e-07 59.3 43 65.1
Sed0009523 Sechium edule HOM05D008630 ORTHO05D010727 3.3e-07 58.5 91 46.2
BcaC07g37350 Brassica carinata HOM05D005842 ORTHO05D007077 5.7e-07 57.8 106 35.8
MELO3C023400.2 Cucumis melo HOM05D008630 ORTHO05D010727 7.5e-07 57.4 81 48.1
HanXRQChr14g0434231 Helianthus annuus HOM05D005842 ORTHO05D007077 7.5e-07 57.4 80 45.0
PGR142G0529 Punica granatum HOM05D005842 ORTHO05D007077 7.5e-07 57.4 87 42.5
THA.LOC104810501 Tarenaya hassleriana HOM05D008630 ORTHO05D010727 9.7e-07 57.0 91 44.0
CANSAT56G0480 Cannabis sativa HOM05D005842 ORTHO05D007077 1.7e-06 56.2 34 76.5
MELO3C023065.2 Cucumis melo HOM05D005842 ORTHO05D007077 1.7e-06 56.2 78 46.2
Sed0006099 Sechium edule HOM05D005842 ORTHO05D007077 1.7e-06 56.2 93 38.7
A08p06740 Brassica napus HOM05D005842 ORTHO05D007077 2.2e-06 55.8 107 36.4
BolC8t47646H Brassica oleracea HOM05D005842 ORTHO05D007077 2.2e-06 55.8 107 36.4
BraA08t32692Z Brassica rapa HOM05D005842 ORTHO05D007077 2.2e-06 55.8 107 36.4
TWI53G0373 Tripterygium wilfordii HOM05D005842 ORTHO05D007077 2.2e-06 55.8 37 70.3
CARHR219200 Cardamine hirsuta HOM05D005842 ORTHO05D007077 2.8e-06 55.5 106 36.8
THA.LOC104818037 Tarenaya hassleriana HOM05D008630 ORTHO05D010727 2.8e-06 55.5 91 41.8
A07p08140 Brassica napus HOM05D005842 ORTHO05D007077 6.3e-06 54.3 87 37.9
C07p12280 Brassica napus HOM05D005842 ORTHO05D007077 6.3e-06 54.3 87 37.9
BolC7t41695H Brassica oleracea HOM05D005842 ORTHO05D007077 6.3e-06 54.3 87 37.9
BraA07t28597Z Brassica rapa HOM05D005842 ORTHO05D007077 6.3e-06 54.3 87 37.9
Psat6g108960 Pisum sativum HOM05D005842 ORTHO05D007077 6.3e-06 54.3 138 31.2
MBI07_g08902_MAGBIO Magnolia biondii HOM05D005842 ORTHO05D007077 8.2e-06 53.9 85 41.2


User provided reference genes

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