Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2510 Trochodendron aralioides HOM05D006404 ORTHO05D008170 1.3e-143 513.1 255 100.0
TAR633G0603 Trochodendron aralioides HOM05D006404 ORTHO05D008170 8.1e-135 483.8 281 88.3
QL01p004100 Quercus lobata HOM05D006404 ORTHO05D008170 2.7e-85 319.3 282 59.6
Manes.06G162300 Manihot esculenta HOM05D006404 ORTHO05D008170 1.0e-81 307.4 282 56.0
CSS0037938 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 2.2e-79 299.7 281 57.3
CiPaw.13G154900 Carya illinoinensis HOM05D006404 ORTHO05D008170 1.8e-78 296.6 283 56.2
Ciclev10014162m.g Citrus clementina HOM05D006404 ORTHO05D008170 2.4e-78 296.2 286 55.6
Potri.001G255700 Populus trichocarpa HOM05D006404 ORTHO05D008170 3.1e-78 295.8 283 56.2
Nn7g36358 Nelumbo nucifera HOM05D006404 ORTHO05D008170 7.0e-78 294.7 281 57.3
Thecc.09G239000 Theobroma cacao HOM05D006404 ORTHO05D008170 7.0e-78 294.7 283 58.3
GSVIVG01031534001 Vitis vinifera HOM05D006404 ORTHO05D008170 5.9e-77 291.6 268 58.6
Haze_23174 Corylus avellana HOM05D006404 ORTHO05D008170 2.9e-76 289.3 275 55.6
Cfa009810 Carpinus fangiana HOM05D006404 ORTHO05D008170 3.8e-76 288.9 284 54.2
Sabra16G0156500 Salix brachista HOM05D006404 ORTHO05D008170 3.8e-76 288.9 264 58.7
TWI32G0006 Tripterygium wilfordii HOM05D006404 ORTHO05D008170 1.1e-75 287.3 278 54.7
Gohir.D09G109000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.9e-75 286.6 286 56.6
Sabra09G0037200 Salix brachista HOM05D006404 ORTHO05D008170 9.5e-75 284.3 274 55.8
Gorai.006G126600 Gossypium raimondii HOM05D006404 ORTHO05D008170 3.6e-74 282.3 286 56.3
Potri.009G051100 Populus trichocarpa HOM05D006404 ORTHO05D008170 6.1e-74 281.6 280 55.0
Gohir.A09G112350 Gossypium hirsutum HOM05D006404 ORTHO05D008170 8.0e-74 281.2 289 56.1
MD03G1172000 Malus domestica HOM05D006404 ORTHO05D008170 8.0e-74 281.2 283 52.3
Nn2g15163 Nelumbo nucifera HOM05D006404 ORTHO05D008170 8.0e-74 281.2 279 54.8
RcHm_v2.0_Chr5g0053011 Rosa chinensis HOM05D006404 ORTHO05D008170 2.3e-73 279.6 286 54.2
FvH4_3g28450 Fragaria vesca HOM05D006404 ORTHO05D008170 1.5e-72 276.9 287 53.0
FAN11G2181 Fragaria x ananassa HOM05D006404 ORTHO05D008170 1.5e-72 276.9 281 53.4
FAN16G0405 Fragaria x ananassa HOM05D006404 ORTHO05D008170 1.5e-72 276.9 287 53.0
Duzib150G0746 Durio zibethinus HOM05D006404 ORTHO05D008170 2.8e-71 272.7 226 65.5
FAN25G0856 Fragaria x ananassa HOM05D006404 ORTHO05D008170 3.7e-71 272.3 289 52.6
Cc01_g05020 Coffea canephora HOM05D006404 ORTHO05D008170 8.3e-71 271.2 278 52.5
Gorai.009G074000 Gossypium raimondii HOM05D006404 ORTHO05D008170 4.1e-70 268.9 287 54.0
FAN21G1559 Fragaria x ananassa HOM05D006404 ORTHO05D008170 2.7e-69 266.2 305 49.8
Aqoxy2G00213 Aquilegia oxysepala HOM05D006404 ORTHO05D008170 7.8e-69 264.6 288 51.4
Gohir.D05G072932 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.7e-68 263.5 287 53.0
PGR102G1713 Punica granatum HOM05D006404 ORTHO05D008170 5.0e-68 261.9 284 51.1
MSTRG.12459 Avicennia marina HOM05D006404 ORTHO05D008170 8.6e-68 261.2 276 51.4
Glyma.01G227500 Glycine max HOM05D006404 ORTHO05D008170 4.3e-67 258.8 277 50.9
THA.LOC104811179 Tarenaya hassleriana HOM05D006404 ORTHO05D008170 5.6e-67 258.5 270 54.8
Duzib168G1560 Durio zibethinus HOM05D006404 ORTHO05D008170 2.1e-66 256.5 232 59.5
Rhsim13G0217700 Rhododendron simsii HOM05D006404 ORTHO05D008170 6.1e-66 255.0 279 49.8
Sed0002434 Sechium edule HOM05D006404 ORTHO05D008170 1.0e-65 254.2 279 51.3
CAN.G494.3 Capsicum annuum HOM05D006404 ORTHO05D008170 5.2e-65 251.9 292 52.1
CANSAT54G0859 Cannabis sativa HOM05D006404 ORTHO05D008170 6.8e-65 251.5 291 47.4
VMungo1215G1207 Vigna mungo HOM05D006404 ORTHO05D008170 1.2e-64 250.8 253 54.2
Sc16g0011280 Simmondsia chinensis HOM05D006404 ORTHO05D008170 7.5e-64 248.1 277 50.2
Eucgr.B03709 Eucalyptus grandis HOM05D006404 ORTHO05D008170 1.3e-63 247.3 265 49.4
DCAR_029968 Daucus carota HOM05D006404 ORTHO05D008170 6.4e-63 245.0 244 52.5
PGSC0003DMG400029994 Solanum tuberosum HOM05D006404 ORTHO05D008170 7.0e-62 241.5 286 46.9
ClCG03G013070 Citrullus lanatus HOM05D006404 ORTHO05D008170 1.2e-61 240.7 276 49.3
Nitab4.5_0006123g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 2.7e-61 239.6 290 49.0
Solyc11g065340.2 Solanum lycopersicum HOM05D006404 ORTHO05D008170 2.7e-61 239.6 258 49.2
Migut.N02343 Erythranthe guttata HOM05D006404 ORTHO05D008170 3.5e-61 239.2 259 51.0
MBI19_g48146_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 4.6e-61 238.8 256 50.4
Lj2A624G32 Lonicera japonica HOM05D006404 ORTHO05D008170 1.7e-60 236.9 226 56.2
CsaV3_1G042990 Cucumis sativus L. HOM05D006404 ORTHO05D008170 1.9e-59 233.4 263 47.9
Lj3g0019929 Lotus japonicus HOM05D006404 ORTHO05D008170 3.3e-59 232.6 286 49.7
Nitab4.5_0007711g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 4.3e-59 232.3 296 46.3
Lsat_1_v5_gn_6_25840 Lactuca sativa HOM05D006404 ORTHO05D008170 7.3e-59 231.5 242 51.7
HanXRQChr13g0401241 Helianthus annuus HOM05D006404 ORTHO05D008170 9.5e-59 231.1 241 49.8
Os01g0275950 Oryza sativa ssp. japonica HOM05D006404 ORTHO05D008170 1.6e-58 230.3 265 47.5
Sopen11g025080 Solanum pennellii HOM05D006404 ORTHO05D008170 2.8e-58 229.6 242 51.2
Zm00001eb332810 Zea mays HOM05D006404 ORTHO05D008170 2.8e-58 229.6 284 45.4
Medtr4g076810 Medicago truncatula HOM05D006404 ORTHO05D008170 3.1e-57 226.1 281 47.3
Glyma.12G020900 Glycine max HOM05D006404 ORTHO05D008170 5.2e-57 225.3 286 47.2
MELO3C015171.2 Cucumis melo HOM05D006404 ORTHO05D008170 3.4e-56 222.6 273 44.3
HPP92_028181 Vanilla planifolia HOM05D006404 ORTHO05D008170 3.4e-56 222.6 249 50.2
Hund07470 Selenicereus undatus HOM05D006404 ORTHO05D008170 7.5e-56 221.5 276 46.0
VMungo1127G0106 Vigna mungo HOM05D006404 ORTHO05D008170 7.5e-56 221.5 286 46.5
Phvul.011G076700 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 1.3e-55 220.7 288 46.9
Ah.06g193910 Amaranthus hybridus HOM05D006404 ORTHO05D008170 6.4e-55 218.4 217 52.5
Lalb_Chr03g0024521 Lupinus albus HOM05D006404 ORTHO05D008170 6.4e-55 218.4 282 45.7
AUR62000151 Chenopodium quinoa HOM05D006404 ORTHO05D008170 3.2e-54 216.1 268 45.5
EL10Ac4g10212 Beta vulgaris HOM05D006404 ORTHO05D008170 4.1e-54 215.7 248 48.4
Psat7g172680 Pisum sativum HOM05D006404 ORTHO05D008170 5.4e-54 215.3 281 45.6
Peaxi162Scf00004g03311 Petunia axillaris HOM05D006404 ORTHO05D008170 7.1e-54 214.9 291 44.0
ATR0307G124 Amborella trichopoda HOM05D006404 ORTHO05D008170 1.2e-53 214.2 312 42.9
TPR.G13759 Trifolium pratense HOM05D006404 ORTHO05D008170 2.7e-53 213.0 284 45.1
AUR62039864 Chenopodium quinoa HOM05D006404 ORTHO05D008170 3.9e-52 209.1 268 45.1
Oeu061307.1 Olea europaea HOM05D006404 ORTHO05D008170 1.9e-51 206.8 201 58.2
SEGI_17812 Sequoiadendron giganteum HOM05D006404 ORTHO05D008170 2.5e-51 206.5 257 46.3
SGA_v2.0_scaffold3G01478 Striga asiatica HOM05D006404 ORTHO05D008170 7.3e-51 204.9 279 44.4
Manes.14G004336 Manihot esculenta HOM05D006404 ORTHO05D008170 2.3e-49 199.9 233 49.4
vmacro04128 Vaccinium macrocarpon HOM05D006404 ORTHO05D008170 4.9e-47 192.2 241 45.2
COL.COLO4_36457 Corchorus olitorius HOM05D006404 ORTHO05D008170 2.7e-45 186.4 169 60.4
Actinidia06923 Actinidia chinensis HOM05D006404 ORTHO05D008170 8.6e-44 181.4 211 51.7
unitig_27.g24999 Utricularia gibba HOM05D006404 ORTHO05D008170 2.8e-42 176.4 289 37.0
Cpa.g.sc84.27 Carica papaya HOM05D006404 ORTHO05D008170 2.2e-39 166.8 154 57.8
ECA233G0536 Erigeron canadensis HOM05D006404 ORTHO05D008170 9.3e-38 161.4 145 55.9
Prupe.4G254900 Prunus persica HOM05D006404 ORTHO05D008170 1.2e-37 161.0 154 55.2
Actinidia16347 Actinidia chinensis HOM05D006404 ORTHO05D008170 7.8e-37 158.3 159 53.5
arahy.Tifrunner.gnm1.ann1.BK260Y Arachis hypogaea HOM05D006404 ORTHO05D008170 1.7e-36 157.1 285 37.2
arahy.Tifrunner.gnm1.ann1.E0EAPG Arachis hypogaea HOM05D006404 ORTHO05D008170 6.6e-36 155.2 287 37.3
Lsat_1_v5_gn_5_69941 Lactuca sativa HOM05D006404 ORTHO05D008170 1.1e-35 154.5 129 61.2
Lsat_1_v5_gn_8_47480 Lactuca sativa HOM05D006404 ORTHO05D008170 1.5e-35 154.1 130 60.8
Ca_26059_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 2.0e-32 143.7 157 51.0
Ca_30127_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 2.0e-32 143.7 157 51.0
TAR623G1438 Trochodendron aralioides HOM05D006201 ORTHO05D007178 2.6e-32 143.3 84 88.1
Atru.chr3.2650 Acer truncatum HOM05D006404 ORTHO05D008170 4.4e-32 142.5 103 70.9
Mapoly0128s0014 Marchantia polymorpha HOM05D006404 ORTHO05D008170 7.3e-27 125.2 276 31.2
Lsat_1_v5_gn_4_119980 Lactuca sativa HOM05D006404 ORTHO05D008170 1.7e-23 114.0 126 49.2
CBR_g12234 Chara braunii HOM05D006404 ORTHO05D008170 1.1e-22 111.3 244 32.0
MBI19_g45588_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 7.1e-22 108.6 128 48.4
Atru.chr3.2651 Acer truncatum HOM05D006404 ORTHO05D008170 3.0e-20 103.2 100 52.0
Thecc.01G390500 Theobroma cacao HOM05D006404 ORTHO05D008170 5.0e-07 59.3 74 44.6
Atru.chr3.2649 Acer truncatum HOM05D006404 ORTHO05D008170 8.4e-07 58.5 29 82.8
TAR362G0714 Trochodendron aralioides HOM05D006404 ORTHO05D414570 7.2e-06 55.5 71 45.1


User provided reference genes

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