Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2473 Trochodendron aralioides HOM05D005552 ORTHO05D414548 2.0e-35 151.8 70 100.0
MSTRG.5133 Avicennia marina HOM05D005552 ORTHO05D006743 1.2e-06 56.2 40 62.5
CiPaw.01G023200 Carya illinoinensis HOM05D005552 ORTHO05D006743 1.2e-06 56.2 33 75.8
Eucgr.I00976 Eucalyptus grandis HOM05D005552 ORTHO05D006743 1.2e-06 56.2 33 69.7
PGR119G0642 Punica granatum HOM05D005552 ORTHO05D006743 1.2e-06 56.2 40 65.0
CSS0032711 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 1.5e-06 55.8 33 72.7
Cfa003976 Carpinus fangiana HOM05D005552 ORTHO05D006743 1.5e-06 55.8 33 72.7
QL06p042750 Quercus lobata HOM05D005552 ORTHO05D006743 1.5e-06 55.8 33 69.7
Solyc01g100190.4 Solanum lycopersicum HOM05D005552 ORTHO05D006743 1.5e-06 55.8 43 58.1
THA.LOC104807572 Tarenaya hassleriana HOM05D005552 ORTHO05D006743 1.5e-06 55.8 40 62.5
COL.COLO4_11363 Corchorus olitorius HOM05D005552 ORTHO05D006743 2.0e-06 55.5 33 72.7
PSO541G0461 Papaver somniferum HOM05D005552 ORTHO05D006743 2.0e-06 55.5 40 65.0
PSO675G7200 Papaver somniferum HOM05D005552 ORTHO05D006743 2.0e-06 55.5 40 65.0
Ciclev10025258m.g Citrus clementina HOM05D005552 ORTHO05D006743 2.6e-06 55.1 33 69.7
Duzib264G1173 Durio zibethinus HOM05D005552 ORTHO05D006743 2.6e-06 55.1 33 72.7
GSVIVG01003549001 Vitis vinifera HOM05D005552 ORTHO05D006743 2.6e-06 55.1 33 72.7
TAR628G0695 Trochodendron aralioides HOM05D005552 ORTHO05D006743 3.3e-06 54.7 33 69.7
Haze_15444 Corylus avellana HOM05D005552 ORTHO05D006743 4.4e-06 54.3 33 69.7
FvH4_1g15480 Fragaria vesca HOM05D005552 ORTHO05D006743 4.4e-06 54.3 40 60.0
FAN19G0212 Fragaria x ananassa HOM05D005552 ORTHO05D006743 4.4e-06 54.3 40 60.0
FAN26G2590 Fragaria x ananassa HOM05D005552 ORTHO05D006743 4.4e-06 54.3 40 60.0
FAN28G0665 Fragaria x ananassa HOM05D005552 ORTHO05D006743 4.4e-06 54.3 40 60.0
RcHm_v2.0_Chr2g0104711 Rosa chinensis HOM05D005552 ORTHO05D006743 4.4e-06 54.3 40 60.0
Hund16313 Selenicereus undatus HOM05D005552 ORTHO05D006743 4.4e-06 54.3 68 41.2
Zm00001eb030410 Zea mays HOM05D005552 ORTHO05D006743 4.4e-06 54.3 33 63.6
Sopen01g043680 Solanum pennellii HOM05D005552 ORTHO05D006743 5.7e-06 53.9 40 60.0
AUR62001963 Chenopodium quinoa HOM05D005552 ORTHO05D006743 7.5e-06 53.5 33 63.6
AUR62003843 Chenopodium quinoa HOM05D005552 ORTHO05D006743 7.5e-06 53.5 33 63.6
Glyma.11G058500 Glycine max HOM05D005552 ORTHO05D006743 7.5e-06 53.5 33 66.7
Nitab4.5_0000368g0430 Nicotiana tabacum HOM05D005552 ORTHO05D006743 7.5e-06 53.5 41 53.7
Potri.001G361900 Populus trichocarpa HOM05D005552 ORTHO05D006743 7.5e-06 53.5 33 63.6
Prupe.7G138000 Prunus persica HOM05D005552 ORTHO05D006743 7.5e-06 53.5 33 60.6
TAR376G0305 Trochodendron aralioides HOM05D005552 ORTHO05D006743 7.5e-06 53.5 24 95.8
CANSAT64G0631 Cannabis sativa HOM05D005552 ORTHO05D006743 9.7e-06 53.1 33 66.7
Mapoly0024s0139 Marchantia polymorpha HOM05D005552 ORTHO05D006743 9.7e-06 53.1 33 63.6
Oeu020899.1 Olea europaea HOM05D005552 ORTHO05D006743 9.7e-06 53.1 40 60.0
Sc16g0001610 Simmondsia chinensis HOM05D005552 ORTHO05D006743 9.7e-06 53.1 25 84.0
TPR.G11337 Trifolium pratense HOM05D005552 ORTHO05D006743 9.7e-06 53.1 40 60.0


User provided reference genes

Program Settings