Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2452 Trochodendron aralioides HOM05D032931 ORTHO05D005600 5.9e-46 187.2 96 100.0
TAR048G0001 Trochodendron aralioides HOM05D032931 ORTHO05D005600 9.2e-39 163.3 92 90.2
TAR636G2680 Trochodendron aralioides HOM05D032931 ORTHO05D005600 9.2e-39 163.3 92 90.2
vmacro19895 Vaccinium macrocarpon HOM05D000760 ORTHO05D000618 7.6e-09 63.9 50 66.0
Lsat_1_v5_gn_1_12301 Lactuca sativa HOM05D000760 ORTHO05D000618 3.8e-08 61.6 47 63.8
TAR376G1204 Trochodendron aralioides HOM05D000760 ORTHO05D000618 3.8e-08 61.6 47 63.8
CSS0005433 Camellia sinensis var. sinensis HOM05D000760 ORTHO05D000618 4.9e-08 61.2 50 62.0
CSS0023627 Camellia sinensis var. sinensis HOM05D000760 ORTHO05D000618 4.9e-08 61.2 50 62.0
Hma1.2p1_0217F.1_g092020 Hydrangea macrophylla HOM05D000760 ORTHO05D000618 4.9e-08 61.2 52 61.5
Rhsim11G0129600 Rhododendron simsii HOM05D000760 ORTHO05D000618 4.9e-08 61.2 52 59.6
TWI23G1285 Tripterygium wilfordii HOM05D000760 ORTHO05D000618 4.9e-08 61.2 52 61.5
Actinidia00208 Actinidia chinensis HOM05D000760 ORTHO05D000618 6.4e-08 60.8 52 61.5
Dinv19365 Davidia involucrata HOM05D000760 ORTHO05D000618 8.4e-08 60.5 52 59.6
Potri.001G210900 Populus trichocarpa HOM05D000760 ORTHO05D000618 8.4e-08 60.5 52 61.5
Actinidia26145 Actinidia chinensis HOM05D000760 ORTHO05D000618 1.1e-07 60.1 50 62.0
TPR.G2116 Trifolium pratense HOM05D000760 ORTHO05D000618 1.1e-07 60.1 64 50.0
GSVIVG01022966001 Vitis vinifera HOM05D000760 ORTHO05D000618 1.1e-07 60.1 52 59.6
Eucgr.G00581 Eucalyptus grandis HOM05D000760 ORTHO05D000618 1.4e-07 59.7 52 61.5
TWI14G0653 Tripterygium wilfordii HOM05D000760 ORTHO05D000618 1.4e-07 59.7 52 59.6
TWI59G1059 Tripterygium wilfordii HOM05D000760 ORTHO05D000618 1.4e-07 59.7 52 61.5
QL11p018468 Quercus lobata HOM05D000760 ORTHO05D000618 1.9e-07 59.3 52 57.7
Cpa.g.sc113.62 Carica papaya HOM05D000760 ORTHO05D000618 2.4e-07 58.9 52 57.7
MELO3C014382.2 Cucumis melo HOM05D000760 ORTHO05D000618 3.2e-07 58.5 52 57.7
QL09p035517 Quercus lobata HOM05D000760 ORTHO05D000618 4.2e-07 58.2 62 51.6
Thecc.02G038400 Theobroma cacao HOM05D000760 ORTHO05D000618 4.2e-07 58.2 52 59.6
TAR381G1697 Trochodendron aralioides HOM05D000760 ORTHO05D000618 4.2e-07 58.2 52 57.7
TAR628G1120 Trochodendron aralioides HOM05D004858 ORTHO05D005600 4.2e-07 58.2 35 88.6
Dinv24280 Davidia involucrata HOM05D000760 ORTHO05D000618 5.4e-07 57.8 52 57.7
CsaV3_6G037340 Cucumis sativus L. HOM05D000760 ORTHO05D000618 7.1e-07 57.4 50 60.0
TAR362G0893 Trochodendron aralioides HOM05D000760 ORTHO05D000618 7.1e-07 57.4 52 55.8
Lsat_1_v5_gn_8_49801 Lactuca sativa HOM05D000760 ORTHO05D000618 9.3e-07 57.0 45 60.0
Nitab4.5_0002245g0050 Nicotiana tabacum HOM05D000760 ORTHO05D000618 9.3e-07 57.0 52 57.7
Nitab4.5_0007420g0010 Nicotiana tabacum HOM05D000760 ORTHO05D000618 9.3e-07 57.0 52 57.7
Phvul.009G123400 Phaseolus vulgaris HOM05D000760 ORTHO05D000618 9.3e-07 57.0 50 54.0
Haze_00467 Corylus avellana HOM05D000760 ORTHO05D000618 1.2e-06 56.6 60 51.7
Gohir.A04G127200 Gossypium hirsutum HOM05D000760 ORTHO05D000618 1.2e-06 56.6 50 62.0
Gohir.D04G172000 Gossypium hirsutum HOM05D000760 ORTHO05D000618 1.2e-06 56.6 50 62.0
Gorai.012G161000 Gossypium raimondii HOM05D000760 ORTHO05D000618 1.2e-06 56.6 50 62.0
Lj1g0002192 Lotus japonicus HOM05D000760 ORTHO05D000618 1.2e-06 56.6 47 57.4
Nn6g34570 Nelumbo nucifera HOM05D004858 ORTHO05D005600 1.2e-06 56.6 58 58.6
SGA_v2.0_scaffold110G31299 Striga asiatica HOM05D000760 ORTHO05D000618 1.2e-06 56.6 52 55.8
Peaxi162Scf00011g00355 Petunia axillaris HOM05D000760 ORTHO05D000618 1.6e-06 56.2 52 55.8
TAR633G2230 Trochodendron aralioides HOM05D000760 ORTHO05D000618 1.6e-06 56.2 52 55.8
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 2.1e-06 55.8 56 53.6
Ciclev10002263m.g Citrus clementina HOM05D000760 ORTHO05D000618 2.1e-06 55.8 52 55.8
Migut.B00839 Erythranthe guttata HOM05D000760 ORTHO05D000618 2.7e-06 55.5 52 53.8
Lj5A252T50 Lonicera japonica HOM05D000760 ORTHO05D000618 2.7e-06 55.5 52 55.8
Lalb_Chr08g0241511 Lupinus albus HOM05D000760 ORTHO05D000618 2.7e-06 55.5 44 59.1
TAR626G1710 Trochodendron aralioides HOM05D000760 ORTHO05D000618 2.7e-06 55.5 62 51.6
ClCG09G014220 Citrullus lanatus HOM05D000760 ORTHO05D000618 3.5e-06 55.1 50 56.0
COL.COLO4_17868 Corchorus olitorius HOM05D000760 ORTHO05D000618 3.5e-06 55.1 52 57.7
Dinv40401 Davidia involucrata HOM05D000760 ORTHO05D000618 3.5e-06 55.1 47 59.6
Eucgr.F04362 Eucalyptus grandis HOM05D000760 ORTHO05D000618 3.5e-06 55.1 47 59.6
MBI06_g20719_MAGBIO Magnolia biondii HOM05D000760 ORTHO05D000618 3.5e-06 55.1 52 57.7
Oeu008892.1 Olea europaea HOM05D000760 ORTHO05D000618 3.5e-06 55.1 52 57.7
Sed0008171 Sechium edule HOM05D000760 ORTHO05D000618 3.5e-06 55.1 52 53.8
Dinv27335 Davidia involucrata HOM05D000760 ORTHO05D000618 4.6e-06 54.7 47 59.6
Duzib248G0425 Durio zibethinus HOM05D000760 ORTHO05D000618 4.6e-06 54.7 52 57.7
unitig_22.g6118 Utricularia gibba HOM05D000760 ORTHO05D000618 4.6e-06 54.7 52 50.0
Duzib052G0018 Durio zibethinus HOM05D000760 ORTHO05D000618 6.0e-06 54.3 52 55.8
Potri.002G085300 Populus trichocarpa HOM05D000760 ORTHO05D000618 6.0e-06 54.3 47 57.4
EL10Ac6g14074 Beta vulgaris HOM05D000760 ORTHO05D000618 7.8e-06 53.9 52 55.8
CAN.G1577.15 Capsicum annuum HOM05D000760 ORTHO05D000618 7.8e-06 53.9 52 50.0
Manes.02G161900 Manihot esculenta HOM05D000760 ORTHO05D000618 7.8e-06 53.9 52 53.8
Sabra03G0010800 Salix brachista HOM05D000760 ORTHO05D000618 7.8e-06 53.9 52 55.8
Sed0011234 Sechium edule HOM05D000760 ORTHO05D000618 7.8e-06 53.9 50 56.0
TAR628G0496 Trochodendron aralioides HOM05D000760 ORTHO05D000618 7.8e-06 53.9 45 57.8


User provided reference genes

Program Settings