Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 7.4e-63 243.8 134 100.0
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 4.4e-39 164.9 134 72.4
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.1e-37 160.2 136 69.1
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.1e-37 160.2 137 65.7
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.1e-37 160.2 137 65.7
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.6e-36 156.4 135 66.7
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 4.6e-36 154.8 129 65.9
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 7.8e-36 154.1 130 68.5
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 7.8e-36 154.1 119 72.3
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 1.7e-35 152.9 135 64.4
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.9e-35 152.1 126 68.3
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 6.6e-35 151.0 131 64.1
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.9e-34 149.4 137 61.3
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.9e-34 149.4 119 70.6
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 3.3e-34 148.7 134 61.2
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 4.3e-34 148.3 135 65.2
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 7.3e-34 147.5 134 62.7
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 1.6e-33 146.4 134 61.9
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 1.6e-33 146.4 135 63.0
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.1e-33 146.0 134 61.9
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 2.8e-33 145.6 126 67.5
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 4.7e-33 144.8 127 65.4
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 1.0e-32 143.7 135 66.7
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 1.4e-32 143.3 126 66.7
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 1.4e-32 143.3 135 63.0
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.8e-32 142.9 124 64.5
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 2.3e-32 142.5 134 61.2
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 3.1e-32 142.1 119 65.5
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 3.1e-32 142.1 134 57.5
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 4.0e-32 141.7 131 62.6
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.2e-32 141.4 105 71.4
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 6.8e-32 141.0 135 62.2
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.5e-31 139.8 134 60.4
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 1.5e-31 139.8 134 60.4
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 2.6e-31 139.0 134 60.4
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 3.4e-31 138.7 130 66.9
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 5.8e-31 137.9 124 62.1
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 7.5e-31 137.5 135 60.7
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 9.8e-31 137.1 135 62.2
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 9.8e-31 137.1 130 66.2
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.7e-30 136.3 127 65.4
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.7e-30 136.3 132 58.3
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 2.2e-30 136.0 119 62.2
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.2e-30 136.0 135 60.0
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 4.9e-30 134.8 127 60.6
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 8.3e-30 134.0 124 59.7
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 8.3e-30 134.0 124 59.7
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 8.3e-30 134.0 123 60.2
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 8.3e-30 134.0 125 62.4
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 1.1e-29 133.7 127 61.4
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 1.1e-29 133.7 140 58.6
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 1.1e-29 133.7 134 57.5
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.1e-29 133.7 108 63.0
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.4e-29 133.3 132 59.8
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.4e-29 133.3 132 59.8
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.9e-29 132.9 136 61.0
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.9e-29 132.9 131 55.7
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 1.9e-29 132.9 123 67.5
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 2.4e-29 132.5 130 57.7
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 2.4e-29 132.5 109 66.1
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 3.2e-29 132.1 133 57.9
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 3.2e-29 132.1 132 57.6
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 4.1e-29 131.7 124 58.9
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 4.1e-29 131.7 124 58.9
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 4.1e-29 131.7 122 67.2
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 9.2e-29 130.6 127 59.8
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 9.2e-29 130.6 123 63.4
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 9.2e-29 130.6 122 67.2
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.2e-28 130.2 131 59.5
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 1.2e-28 130.2 132 56.8
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 1.2e-28 130.2 132 59.1
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 2.0e-28 129.4 118 64.4
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 2.7e-28 129.0 118 62.7
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 4.6e-28 128.3 140 55.7
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 4.6e-28 128.3 126 61.9
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 6.0e-28 127.9 134 56.7
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 6.0e-28 127.9 124 62.9
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 1.0e-27 127.1 125 59.2
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 1.0e-27 127.1 125 59.2
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 1.0e-27 127.1 125 59.2
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.3e-27 126.7 105 62.9
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.3e-27 126.7 114 64.9
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.7e-27 126.3 116 61.2
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 2.3e-27 125.9 129 58.1
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 3.0e-27 125.6 125 59.2
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 3.0e-27 125.6 125 59.2
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 3.0e-27 125.6 131 58.8
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.0e-27 125.6 141 53.9
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 1.5e-26 123.2 125 58.4
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.5e-26 123.2 127 59.8
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 2.5e-26 122.5 134 53.7
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 4.3e-26 121.7 129 53.5
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 4.3e-26 121.7 132 56.8
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 1.2e-25 120.2 131 51.9
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 1.2e-25 120.2 136 52.2
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.6e-25 119.8 129 58.1
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.6e-25 119.8 113 57.5
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 2.1e-25 119.4 142 57.0
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.1e-25 119.4 141 53.9
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 2.8e-25 119.0 139 51.8
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 1.4e-24 116.7 129 55.8
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 2.3e-24 115.9 137 54.0
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 4.0e-24 115.2 116 55.2
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 2.6e-23 112.5 132 48.5
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 2.6e-23 112.5 101 62.4
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 4.4e-23 111.7 119 60.5
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 6.4e-22 107.8 135 46.7
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 8.3e-22 107.5 129 49.6
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 3.2e-21 105.5 193 41.5
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 5.4e-21 104.8 110 55.5
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 7.1e-21 104.4 99 57.6
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 9.2e-21 104.0 129 51.9
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.6e-20 103.2 132 47.0
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.1e-18 97.1 70 74.3
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.6e-18 94.7 70 74.3
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 8.1e-17 90.9 120 46.7
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 3.1e-16 89.0 124 43.5
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 1.3e-14 83.6 90 58.9
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 8.4e-14 80.9 88 47.7
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 8.4e-14 80.9 109 42.2
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 5.4e-13 78.2 85 48.2
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 3.9e-11 72.0 84 54.8
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.1e-08 63.9 90 38.9
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 1.5e-07 60.1 97 34.0
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 1.7e-06 56.6 100 32.0
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 2.2e-06 56.2 42 59.5
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 2.2e-06 56.2 42 59.5


User provided reference genes

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