Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 2.4e-110 402.1 200 100.0
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 4.7e-69 265.0 200 70.5
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 1.1e-65 253.8 196 67.3
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 2.2e-63 246.1 196 65.8
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 1.2e-61 240.4 198 64.6
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 3.3e-59 232.3 201 61.2
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 4.4e-59 231.9 173 67.6
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 4.8e-58 228.4 202 60.4
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 7.0e-57 224.6 187 63.1
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 4.5e-56 221.9 174 66.1
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 4.5e-56 221.9 194 60.3
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 1.7e-55 219.9 195 61.0
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 1.1e-54 217.2 198 58.6
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.5e-54 216.9 187 61.0
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 7.2e-54 214.5 187 62.6
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 7.2e-54 214.5 192 59.9
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 9.4e-54 214.2 191 59.7
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 1.6e-53 213.4 197 56.9
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 2.1e-53 213.0 197 56.9
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 3.6e-53 212.2 196 57.7
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 6.1e-53 211.5 188 60.1
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 8.0e-53 211.1 197 58.4
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 8.0e-53 211.1 197 61.4
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 1.8e-52 209.9 187 60.4
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 2.3e-52 209.5 196 57.7
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 2.0e-51 206.5 188 58.5
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 7.5e-51 204.5 176 61.4
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 9.8e-51 204.1 197 56.9
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 1.3e-50 203.8 188 58.0
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 1.3e-50 203.8 171 62.6
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 2.2e-50 203.0 173 63.0
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 2.8e-50 202.6 199 57.8
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.7e-50 202.2 200 57.0
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 2.7e-48 196.1 144 70.1
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 5.9e-48 194.9 147 68.7
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 5.9e-48 194.9 198 55.1
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 7.7e-48 194.5 189 55.6
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 5.0e-47 191.8 178 58.4
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 8.6e-47 191.0 145 68.3
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 8.6e-47 191.0 197 55.3
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 1.1e-46 190.7 195 53.3
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 1.9e-46 189.9 144 64.6
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 3.3e-46 189.1 198 53.5
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 3.3e-46 189.1 146 64.4
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 4.2e-46 188.7 140 67.9
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 5.5e-46 188.3 204 54.4
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 9.5e-46 187.6 147 65.3
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 9.5e-46 187.6 145 62.8
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 2.1e-45 186.4 151 62.3
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 2.8e-45 186.0 193 51.8
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 1.4e-44 183.7 194 52.6
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 5.2e-44 181.8 196 51.5
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 6.8e-44 181.4 190 53.2
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 6.8e-44 181.4 148 63.5
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 6.8e-44 181.4 148 63.5
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 6.8e-44 181.4 148 63.5
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 2.6e-43 179.5 191 50.8
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 4.4e-43 178.7 192 54.7
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 4.4e-43 178.7 174 55.7
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 7.5e-43 177.9 196 53.1
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 6.3e-42 174.9 99 81.8
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 8.3e-42 174.5 174 54.0
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 1.1e-41 174.1 100 83.0
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 1.8e-41 173.3 198 51.5
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 2.4e-41 172.9 196 51.5
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 4.1e-41 172.2 198 52.5
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 9.2e-41 171.0 98 80.6
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 1.2e-40 170.6 192 50.5
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 1.6e-40 170.2 171 53.2
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 1.6e-40 170.2 198 51.5
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 2.0e-40 169.9 197 52.8
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 2.0e-40 169.9 111 71.2
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 4.5e-40 168.7 100 77.0
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 4.5e-40 168.7 145 60.7
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 7.8e-40 167.9 171 52.6
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 1.0e-39 167.5 197 52.8
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 1.7e-39 166.8 103 74.8
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 2.3e-39 166.4 145 58.6
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 3.8e-39 165.6 197 50.8
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 5.0e-39 165.2 171 53.2
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 8.6e-39 164.5 199 48.7
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 8.6e-39 164.5 182 51.6
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 1.1e-38 164.1 187 47.1
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 2.5e-38 162.9 167 54.5
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 2.1e-37 159.8 145 56.6
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 2.1e-37 159.8 197 49.7
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 3.6e-37 159.1 94 78.7
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 3.6e-37 159.1 201 47.8
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 3.6e-37 159.1 143 58.0
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 4.7e-37 158.7 145 55.2
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 6.1e-37 158.3 82 89.0
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 6.1e-37 158.3 102 71.6
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 4.0e-36 155.6 119 66.4
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 5.2e-36 155.2 242 41.7
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 5.2e-36 155.2 122 64.8
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 5.2e-36 155.2 106 67.0
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 6.8e-36 154.8 241 41.5
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 8.9e-36 154.5 199 46.2
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 1.2e-35 154.1 242 41.7
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 1.2e-35 154.1 171 49.1
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 3.4e-35 152.5 199 45.7
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 3.4e-35 152.5 197 46.7
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 3.4e-35 152.5 242 41.3
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 4.4e-35 152.1 122 63.1
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 7.5e-35 151.4 207 45.4
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 9.8e-35 151.0 119 63.9
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 1.3e-34 150.6 200 47.0
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 1.3e-34 150.6 100 72.0
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 2.2e-34 149.8 197 47.7
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 2.2e-34 149.8 94 73.4
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.1e-33 147.5 242 40.9
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 2.7e-32 142.9 98 70.4
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 2.5e-30 136.3 78 76.9
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 4.7e-29 132.1 138 47.1
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 1.5e-27 127.1 94 60.6
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 3.4e-27 125.9 108 55.6
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 8.3e-26 121.3 101 64.4
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 8.3e-26 121.3 92 58.7
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 3.5e-24 115.9 164 41.5
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.0e-23 114.4 95 61.1
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 3.9e-23 112.5 246 33.3
MBI08_g29407_MAGBIO Magnolia biondii HOM05D002127 ORTHO05D007295 1.6e-21 107.1 115 53.0
MCO14G392 Micromonas commoda HOM05D005893 ORTHO05D007295 3.6e-21 105.9 159 40.9
SMO364G0951 Selaginella moellendorffii HOM05D005893 ORTHO05D007295 4.7e-21 105.5 72 65.3
MBI05_g14980_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.4e-19 99.4 101 55.4
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 5.8e-19 98.6 159 39.0
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 2.2e-18 96.7 98 49.0
MBI04_g06289_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.6e-16 90.5 118 45.8
MBI19_g05599_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.5e-16 89.4 92 56.5
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 6.6e-15 85.1 99 50.5
Cre07.g334851 Chlamydomonas reinhardtii HOM05D005893 ORTHO05D007295 5.2e-12 75.5 72 47.2
Rhsim05G0120600 Rhododendron simsii HOM05D005893 ORTHO05D007295 5.2e-12 75.5 180 30.6
MBI05_g31458_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 1.5e-11 73.9 128 39.8
Cfa025074 Carpinus fangiana HOM05D005893 ORTHO05D007295 1.3e-10 70.9 70 44.3
PRCOL_00001193 Prasinoderma coloniale HOM05D001599 ORTHO05D003184 1.4e-09 67.4 72 43.1
Mapoly0032s0026 Marchantia polymorpha HOM05D005893 ORTHO05D007295 4.1e-09 65.9 78 41.0


User provided reference genes

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