Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 8.6e-87 323.6 156 100.0
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 1.3e-55 219.9 184 64.7
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 4.8e-29 131.7 190 46.8
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 4.1e-28 128.6 193 46.1
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 1.5e-27 126.7 193 43.0
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 1.7e-26 123.2 189 45.5
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 1.0e-23 114.0 180 43.3
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 1.4e-23 113.6 184 43.5
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 1.8e-23 113.2 191 42.9
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 1.8e-23 113.2 188 40.4
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 2.0e-22 109.8 183 39.9
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 2.0e-22 109.8 183 39.9
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 9.7e-22 107.5 201 42.8
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 4.8e-21 105.1 192 41.1
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 1.1e-20 104.0 187 40.1
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 1.8e-20 103.2 163 42.9
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 1.2e-19 100.5 183 39.9
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 1.5e-19 100.1 204 36.8
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 2.0e-19 99.8 189 40.7
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 2.9e-18 95.9 182 39.6
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 3.8e-18 95.5 177 40.7
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 4.2e-17 92.0 190 36.3
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 7.2e-17 91.3 189 35.4
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 9.4e-17 90.9 201 38.8
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 9.4e-17 90.9 221 35.7
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 3.6e-16 89.0 194 36.1
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 1.0e-15 87.4 196 35.7
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 1.4e-15 87.0 185 37.3
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 1.4e-15 87.0 195 39.5
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 1.4e-15 87.0 195 40.0
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 3.0e-15 85.9 192 34.9
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 6.7e-15 84.7 194 36.1
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 1.5e-14 83.6 189 34.4
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 3.3e-14 82.4 241 30.3
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 9.7e-14 80.9 183 35.0
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 2.8e-13 79.3 186 34.9
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 4.8e-13 78.6 186 34.9
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 6.3e-13 78.2 166 36.7
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 1.8e-12 76.6 195 34.4
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 1.2e-11 73.9 64 60.9
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 1.6e-11 73.6 195 31.8
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 2.6e-11 72.8 191 33.0
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 5.9e-11 71.6 195 31.3
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 5.9e-11 71.6 194 32.0
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 1.0e-10 70.9 197 30.5
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 1.3e-10 70.5 194 32.5
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 1.3e-10 70.5 194 32.5
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 1.7e-10 70.1 203 33.0
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 2.2e-10 69.7 189 31.7
Nn7g36621 Nelumbo nucifera HOM05D007739 ORTHO05D009838 2.2e-10 69.7 116 39.7
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 2.9e-10 69.3 207 29.5
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 2.9e-10 69.3 197 31.5
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 3.8e-10 68.9 195 31.3
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 1.9e-09 66.6 192 31.8
Nn7g36303 Nelumbo nucifera HOM05D007739 ORTHO05D009838 2.5e-09 66.2 56 64.3
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 4.2e-09 65.5 192 31.8
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 1.2e-08 63.9 188 31.9
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 1.6e-08 63.5 81 43.2
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 2.7e-08 62.8 111 40.5
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 6.1e-08 61.6 182 33.0
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 1.0e-07 60.8 182 33.0
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 1.8e-07 60.1 164 32.3
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 1.5e-06 57.0 94 41.5
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 2.0e-06 56.6 200 27.5
Aqoxy1G02236 Aquilegia oxysepala HOM05D007739 ORTHO05D009838 9.7e-06 54.3 160 32.5
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 9.7e-06 54.3 187 32.1


User provided reference genes

Program Settings