Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2289 Trochodendron aralioides HOM05D007825 ORTHO05D009693 3.0e-35 151.8 105 100.0
TAR623G0830 Trochodendron aralioides HOM05D007825 ORTHO05D009693 1.9e-21 105.9 108 74.1
Rhsim03G0074400 Rhododendron simsii HOM05D001257 ORTHO05D007181 3.7e-17 91.7 99 53.5
GSVIVG01033861001 Vitis vinifera HOM05D007825 ORTHO05D009693 4.8e-17 91.3 103 50.5
Dinv31697 Davidia involucrata HOM05D007825 ORTHO05D009693 1.1e-16 90.1 103 50.5
Lj5g0027478 Lotus japonicus HOM05D007825 ORTHO05D009693 5.9e-15 84.3 90 53.3
MBI17_g08331_MAGBIO Magnolia biondii HOM05D007825 ORTHO05D009693 7.7e-15 84.0 105 48.6
Cc06_g05960 Coffea canephora HOM05D007825 ORTHO05D009693 2.9e-14 82.0 86 51.2
Nn2g14176 Nelumbo nucifera HOM05D007825 ORTHO05D009693 5.0e-14 81.3 104 56.7
Ca_00897_v3 Cicer arietinum L. HOM05D007825 ORTHO05D009693 1.5e-13 79.7 92 47.8
Aqoxy4G02759 Aquilegia oxysepala HOM05D007825 ORTHO05D009693 2.5e-13 79.0 108 55.6
Eucgr.A02998 Eucalyptus grandis HOM05D007825 ORTHO05D009693 2.5e-13 79.0 103 46.6
Glyma.13G154500 Glycine max HOM05D007825 ORTHO05D009693 4.2e-13 78.2 93 50.5
arahy.Tifrunner.gnm1.ann1.KBFV5H Arachis hypogaea HOM05D001354 ORTHO05D007486 7.2e-13 77.4 89 59.6
TPR.G9902 Trifolium pratense HOM05D007825 ORTHO05D009693 7.2e-13 77.4 90 46.7
Actinidia07924 Actinidia chinensis HOM05D001354 ORTHO05D007486 1.2e-12 76.6 86 52.3
Thecc.05G090800 Theobroma cacao HOM05D007825 ORTHO05D009693 1.2e-12 76.6 96 44.8
Glyma.19G194978 Glycine max HOM05D007825 ORTHO05D009693 1.6e-12 76.3 91 49.5
Aqoxy2G01123 Aquilegia oxysepala HOM05D007825 ORTHO05D009693 2.7e-12 75.5 86 52.3
Glyma.09G026600 Glycine max HOM05D007825 ORTHO05D009693 3.6e-12 75.1 93 62.4
Atru.chr2.2492 Acer truncatum HOM05D007825 ORTHO05D009693 6.1e-12 74.3 103 43.7
Duzib093G1765 Durio zibethinus HOM05D007825 ORTHO05D009693 6.1e-12 74.3 96 43.8
Migut.J01022 Erythranthe guttata HOM05D007825 ORTHO05D009693 6.1e-12 74.3 93 62.4
Psat3g207080 Pisum sativum HOM05D007825 ORTHO05D009693 6.1e-12 74.3 93 53.8
arahy.Tifrunner.gnm1.ann1.S2NT6M Arachis hypogaea HOM05D007825 ORTHO05D009693 1.4e-11 73.2 88 58.0
FAN14G3782 Fragaria x ananassa HOM05D007825 ORTHO05D009693 1.8e-11 72.8 86 57.0
Medtr1g059820 Medicago truncatula HOM05D007825 ORTHO05D009693 1.8e-11 72.8 92 45.7
CiPaw.09G015200 Carya illinoinensis HOM05D007825 ORTHO05D009693 2.3e-11 72.4 95 53.7
MD14G1027100 Malus domestica HOM05D007825 ORTHO05D009693 2.3e-11 72.4 93 59.1
Phvul.001G191100 Phaseolus vulgaris HOM05D007825 ORTHO05D009693 3.0e-11 72.0 94 47.9
Cpa.g.sc5.6 Carica papaya HOM05D007825 ORTHO05D009693 4.0e-11 71.6 91 46.2
FAN05G0267 Fragaria x ananassa HOM05D007825 ORTHO05D009693 4.0e-11 71.6 86 54.7
Prupe.7G104600 Prunus persica HOM05D007825 ORTHO05D009693 4.0e-11 71.6 103 47.6
CARHR162440 Cardamine hirsuta HOM05D007825 ORTHO05D009693 5.2e-11 71.2 91 48.4
Haze_12107 Corylus avellana HOM05D001354 ORTHO05D007486 5.2e-11 71.2 105 53.3
MD12G1027000 Malus domestica HOM05D007825 ORTHO05D009693 6.8e-11 70.9 90 45.6
AT3G52620 Arabidopsis thaliana HOM05D007825 ORTHO05D009693 8.8e-11 70.5 88 47.7
COL.COLO4_29710 Corchorus olitorius HOM05D007825 ORTHO05D009693 1.5e-10 69.7 94 53.2
Phvul.003G041100 Phaseolus vulgaris HOM05D007825 ORTHO05D009693 1.5e-10 69.7 93 55.9
AL5G33400 Arabidopsis lyrata HOM05D007825 ORTHO05D009693 2.0e-10 69.3 91 47.3
BcaB01g00352 Brassica carinata HOM05D007825 ORTHO05D009693 2.6e-10 68.9 91 47.3
BcaC07g39631 Brassica carinata HOM05D007825 ORTHO05D009693 2.6e-10 68.9 91 47.3
A09p45710 Brassica napus HOM05D007825 ORTHO05D009693 2.6e-10 68.9 91 47.3
C08p27910 Brassica napus HOM05D007825 ORTHO05D009693 2.6e-10 68.9 91 47.3
BolC8t50406H Brassica oleracea HOM05D007825 ORTHO05D009693 2.6e-10 68.9 91 47.3
BraA09t40032Z Brassica rapa HOM05D007825 ORTHO05D009693 2.6e-10 68.9 91 47.3
Cfa009073 Carpinus fangiana HOM05D007825 ORTHO05D009693 2.6e-10 68.9 107 56.1
Lalb_Chr10g0096381 Lupinus albus HOM05D007825 ORTHO05D009693 2.6e-10 68.9 91 49.5
Sp5g09670 Schrenkiella parvula HOM05D007825 ORTHO05D009693 2.6e-10 68.9 90 48.9
TWI74G1133 Tripterygium wilfordii HOM05D007825 ORTHO05D009693 2.6e-10 68.9 91 45.1
FAN02G3309 Fragaria x ananassa HOM05D007825 ORTHO05D009693 3.4e-10 68.6 86 54.7
FAN14G2292 Fragaria x ananassa HOM05D007825 ORTHO05D009693 3.4e-10 68.6 86 54.7
QL07p038635 Quercus lobata HOM05D007825 ORTHO05D009693 5.7e-10 67.8 92 42.4
Nn6g34873 Nelumbo nucifera HOM05D007825 ORTHO05D009693 7.5e-10 67.4 106 57.5
Solyc09g009930.2 Solanum lycopersicum HOM05D007825 ORTHO05D009693 7.5e-10 67.4 88 51.1
Sopen09g004680 Solanum pennellii HOM05D007825 ORTHO05D009693 7.5e-10 67.4 88 51.1
RcHm_v2.0_Chr3g0474201 Rosa chinensis HOM05D007825 ORTHO05D009693 9.8e-10 67.0 86 55.8
PGSC0003DMG400008872 Solanum tuberosum HOM05D007825 ORTHO05D009693 9.8e-10 67.0 88 59.1
BcaB02g07824 Brassica carinata HOM05D007825 ORTHO05D009693 1.3e-09 66.6 86 48.8
Lalb_Chr17g0338831 Lupinus albus HOM05D007825 ORTHO05D009693 1.3e-09 66.6 90 47.8
Carub.0005s1904 Capsella rubella HOM05D007825 ORTHO05D009693 2.2e-09 65.9 88 46.6
Glyma.10G074000 Glycine max HOM05D007825 ORTHO05D009693 2.2e-09 65.9 93 57.0
Lalb_Chr02g0154901 Lupinus albus HOM05D007825 ORTHO05D009693 2.2e-09 65.9 95 47.4
Potri.006G211600 Populus trichocarpa HOM05D007825 ORTHO05D009693 2.2e-09 65.9 87 46.0
CsaV3_3G037370 Cucumis sativus L. HOM05D007825 ORTHO05D009693 3.7e-09 65.1 105 54.3
MELO3C009481.2 Cucumis melo HOM05D007825 ORTHO05D009693 4.9e-09 64.7 105 57.1
THA.LOC104799760 Tarenaya hassleriana HOM05D007825 ORTHO05D009693 4.9e-09 64.7 90 43.3
arahy.Tifrunner.gnm1.ann1.24RTVW Arachis hypogaea HOM05D007825 ORTHO05D009693 8.3e-09 63.9 90 60.0
arahy.Tifrunner.gnm1.ann1.L43FYW Arachis hypogaea HOM05D007825 ORTHO05D009693 8.3e-09 63.9 90 60.0
Thhalv10010896m.g Eutrema salsugineum HOM05D007825 ORTHO05D009693 8.3e-09 63.9 91 45.1
Peaxi162Scf00404g00115 Petunia axillaris HOM05D007825 ORTHO05D009693 8.3e-09 63.9 93 51.6
Hma1.2p1_3516F.1_g336516 Hydrangea macrophylla HOM05D020730 ORTHO05D009693 1.1e-08 63.5 95 41.1
Potri.016G078700 Populus trichocarpa HOM05D007825 ORTHO05D009693 1.4e-08 63.2 92 41.3
Sabra16G0083000 Salix brachista HOM05D007825 ORTHO05D009693 1.8e-08 62.8 93 39.8
ClCG10G018870 Citrullus lanatus HOM05D007825 ORTHO05D009693 3.1e-08 62.0 88 55.7
Sc07g0005630 Simmondsia chinensis HOM05D007825 ORTHO05D009693 4.1e-08 61.6 98 42.9
Ah.15g090680 Amaranthus hybridus HOM05D007825 ORTHO05D009693 7.0e-08 60.8 90 40.0
Sabra06G0163100 Salix brachista HOM05D001354 ORTHO05D007486 7.0e-08 60.8 87 42.5
Dinv21196 Davidia involucrata HOM05D007825 ORTHO05D009693 9.2e-08 60.5 55 56.4
Sed0008191 Sechium edule HOM05D007825 ORTHO05D009693 1.2e-07 60.1 88 56.8
Manes.09G054200 Manihot esculenta HOM05D007825 ORTHO05D009693 1.6e-07 59.7 86 40.7
DCAR_013397 Daucus carota HOM05D007825 ORTHO05D009693 3.5e-07 58.5 92 37.0
EL10Ac7g16903 Beta vulgaris HOM05D007825 ORTHO05D009693 5.9e-07 57.8 96 39.6
SalBow3G1626 Salvia bowleyana HOM05D007825 ORTHO05D009693 7.7e-07 57.4 98 35.7
MD12G1088600 Malus domestica HOM05D007825 ORTHO05D009693 1.7e-06 56.2 90 55.6
AUR62006195 Chenopodium quinoa HOM05D007825 ORTHO05D009693 2.3e-06 55.8 90 35.6


User provided reference genes

Program Settings