Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2168 Trochodendron aralioides HOM05D010033 ORTHO05D011583 1.9e-84 315.8 165 100.0
TAR633G2038 Trochodendron aralioides HOM05D010033 ORTHO05D011583 1.2e-51 206.8 161 67.7
QL07p043888 Quercus lobata HOM05D010033 ORTHO05D011583 1.4e-18 97.1 164 39.0
Ciclev10017540m.g Citrus clementina HOM05D010033 ORTHO05D011583 2.6e-17 92.8 158 43.0
Lj5g0008311 Lotus japonicus HOM05D010033 ORTHO05D011583 9.9e-17 90.9 167 35.9
Atru.chr3.1311 Acer truncatum HOM05D010033 ORTHO05D011583 3.8e-16 89.0 164 40.2
Glyma.13G143800 Glycine max HOM05D010033 ORTHO05D011583 3.8e-16 89.0 163 35.6
Phvul.007G149500 Phaseolus vulgaris HOM05D010033 ORTHO05D011583 3.8e-16 89.0 163 32.5
Ciclev10017036m.g Citrus clementina HOM05D010033 ORTHO05D011583 3.2e-15 85.9 158 40.5
Atru.chr13.539 Acer truncatum HOM05D010033 ORTHO05D011583 7.1e-15 84.7 147 42.9
Haze_20563 Corylus avellana HOM05D004255 ORTHO05D011583 1.6e-14 83.6 160 35.6
Atru.chr3.1312 Acer truncatum HOM05D010033 ORTHO05D011583 6.0e-14 81.6 147 40.8
Cfa017588 Carpinus fangiana HOM05D010033 ORTHO05D011583 6.0e-14 81.6 160 35.0
Prupe.6G233900 Prunus persica HOM05D010033 ORTHO05D011583 7.9e-14 81.3 165 37.0
Psat6g073280 Pisum sativum HOM05D010033 ORTHO05D011583 3.0e-13 79.3 164 34.1
Medtr1g063840 Medicago truncatula HOM05D010033 ORTHO05D011583 3.9e-13 79.0 164 34.8
TWI36G0490 Tripterygium wilfordii HOM05D026273 ORTHO05D011583 1.1e-12 77.4 140 39.3
Manes.13G072350 Manihot esculenta HOM05D026273 ORTHO05D011583 7.4e-12 74.7 165 40.0
Nn1g01969 Nelumbo nucifera HOM05D010033 ORTHO05D011583 2.8e-11 72.8 145 31.0
TPR.G20201 Trifolium pratense HOM05D010033 ORTHO05D011583 3.7e-11 72.4 164 33.5
TWI77G0814 Tripterygium wilfordii HOM05D010033 ORTHO05D011583 3.1e-10 69.3 162 31.5
TWI74G0061 Tripterygium wilfordii HOM05D010033 ORTHO05D011583 7.6e-09 64.7 163 31.9
CDE05G0337 Ceratophyllum demersum HOM05D007466 ORTHO05D002463 1.0e-08 64.3 151 32.5
FAN05G5633 Fragaria x ananassa HOM05D007466 ORTHO05D002463 1.0e-08 64.3 160 30.0
TWI77G0432 Tripterygium wilfordii HOM05D010033 ORTHO05D011583 1.0e-08 64.3 162 30.9
TWI77G0433 Tripterygium wilfordii HOM05D010033 ORTHO05D011583 2.2e-08 63.2 151 32.5
Aqoxy4G01992 Aquilegia oxysepala HOM05D007466 ORTHO05D002463 8.4e-08 61.2 151 30.5
GSVIVG01030614001 Vitis vinifera HOM05D007466 ORTHO05D002463 1.4e-07 60.5 147 33.3
FvH4_6g26390 Fragaria vesca HOM05D007466 ORTHO05D002463 1.9e-07 60.1 167 29.3
CiPaw.04G117300 Carya illinoinensis HOM05D007466 ORTHO05D002463 5.5e-07 58.5 155 32.3
Atru.chr3.1315 Acer truncatum HOM05D010033 ORTHO05D011583 7.1e-07 58.2 115 39.1
Ciclev10017978m.g Citrus clementina HOM05D010033 ORTHO05D011583 7.1e-07 58.2 121 38.0
EL10Ac2g04092 Beta vulgaris HOM05D007466 ORTHO05D002463 1.6e-06 57.0 167 31.7
Gohir.A12G156100 Gossypium hirsutum HOM05D007466 ORTHO05D002463 1.6e-06 57.0 156 30.8
HanXRQChr14g0459021 Helianthus annuus HOM05D007466 ORTHO05D002463 1.6e-06 57.0 154 29.2
Phvul.005G113900 Phaseolus vulgaris HOM05D007466 ORTHO05D002463 1.6e-06 57.0 151 31.8
Gorai.008G172300 Gossypium raimondii HOM05D007466 ORTHO05D002463 2.1e-06 56.6 156 30.8
PGR042G2713 Punica granatum HOM05D007466 ORTHO05D002463 2.7e-06 56.2 155 31.0
CSS0032012 Camellia sinensis var. sinensis HOM05D007466 ORTHO05D002463 4.6e-06 55.5 124 33.1
Medtr2g088760 Medicago truncatula HOM05D007466 ORTHO05D002463 4.6e-06 55.5 159 32.7
Sed0014854 Sechium edule HOM05D007466 ORTHO05D002463 4.6e-06 55.5 134 31.3
Gohir.D12G159200 Gossypium hirsutum HOM05D007466 ORTHO05D002463 6.0e-06 55.1 157 31.2
QL08p033690 Quercus lobata HOM05D007466 ORTHO05D002463 7.9e-06 54.7 156 32.1
TAR624G0229 Trochodendron aralioides HOM05D007466 ORTHO05D002463 7.9e-06 54.7 151 27.8
VMungo1080G0180 Vigna mungo HOM05D007466 ORTHO05D002463 7.9e-06 54.7 151 31.1


User provided reference genes

Program Settings