Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2085 Trochodendron aralioides HOM05D005651 ORTHO05D006877 3.4e-62 241.5 123 100.0
TAR362G0451 Trochodendron aralioides HOM05D005651 ORTHO05D006877 6.0e-35 151.0 121 67.8
Nn8g41263 Nelumbo nucifera HOM05D005651 ORTHO05D006877 6.3e-24 114.4 120 52.5
PSO017G3585 Papaver somniferum HOM05D005651 ORTHO05D006877 1.5e-22 109.8 120 53.3
PSO063G2404 Papaver somniferum HOM05D005651 ORTHO05D006877 1.7e-21 106.3 120 50.8
Ciclev10004169m.g Citrus clementina HOM05D005651 ORTHO05D006877 3.8e-21 105.1 121 47.1
Ca_16431_v3 Cicer arietinum L. HOM05D005651 ORTHO05D006877 6.5e-21 104.4 121 43.0
GSVIVG01031569001 Vitis vinifera HOM05D005651 ORTHO05D006877 6.5e-21 104.4 121 47.1
MBI11_g07399_MAGBIO Magnolia biondii HOM05D005651 ORTHO05D006877 1.4e-20 103.2 120 46.7
QL06p027298 Quercus lobata HOM05D005651 ORTHO05D006877 2.5e-20 102.4 121 45.5
Aqoxy2G04074 Aquilegia oxysepala HOM05D005651 ORTHO05D006877 4.2e-20 101.7 75 65.3
Haze_11684 Corylus avellana HOM05D005651 ORTHO05D006877 7.2e-20 100.9 121 43.0
Atru.chr3.1765 Acer truncatum HOM05D005651 ORTHO05D006877 9.3e-20 100.5 120 46.7
Rhsim02G0090700 Rhododendron simsii HOM05D005651 ORTHO05D006877 9.3e-20 100.5 120 46.7
Dinv32168 Davidia involucrata HOM05D005651 ORTHO05D006877 1.6e-19 99.8 121 44.6
Prupe.1G172400 Prunus persica HOM05D005651 ORTHO05D006877 1.6e-19 99.8 119 46.2
TPR.G18109 Trifolium pratense HOM05D005651 ORTHO05D006877 2.7e-19 99.0 121 43.0
Lj6g0020014 Lotus japonicus HOM05D005651 ORTHO05D006877 7.9e-19 97.4 121 38.8
vmacro15590 Vaccinium macrocarpon HOM05D005651 ORTHO05D006877 1.0e-18 97.1 117 46.2
Medtr3g084640 Medicago truncatula HOM05D005651 ORTHO05D006877 2.3e-18 95.9 120 43.3
CiPaw.01G113500 Carya illinoinensis HOM05D005651 ORTHO05D006877 6.7e-18 94.4 116 44.8
Potri.002G232700 Populus trichocarpa HOM05D005651 ORTHO05D006877 6.7e-18 94.4 115 45.2
Glyma.11G253600 Glycine max HOM05D005651 ORTHO05D006877 8.8e-18 94.0 120 42.5
Sabra02G0177500 Salix brachista HOM05D005651 ORTHO05D006877 1.9e-17 92.8 116 44.0
Actinidia13837 Actinidia chinensis HOM05D005651 ORTHO05D006877 2.5e-17 92.4 75 62.7
MD04G1022200 Malus domestica HOM05D005651 ORTHO05D006877 2.5e-17 92.4 76 57.9
RcHm_v2.0_Chr4g0412511 Rosa chinensis HOM05D005651 ORTHO05D006877 4.3e-17 91.7 76 56.6
Lj3C272T4 Lonicera japonica HOM05D005651 ORTHO05D006877 5.7e-17 91.3 73 60.3
Manes.05G198800 Manihot esculenta HOM05D005651 ORTHO05D006877 9.7e-17 90.5 75 57.3
DCAR_026668 Daucus carota HOM05D005651 ORTHO05D006877 1.3e-16 90.1 115 46.1
Duzib212G0903 Durio zibethinus HOM05D005651 ORTHO05D006877 1.3e-16 90.1 119 42.9
Psat2g094280 Pisum sativum HOM05D005651 ORTHO05D006877 1.3e-16 90.1 120 39.2
Cpa.g.sc157.13 Carica papaya HOM05D005651 ORTHO05D006877 2.2e-16 89.4 121 41.3
COL.COLO4_35960 Corchorus olitorius HOM05D005651 ORTHO05D006877 2.2e-16 89.4 75 58.7
FAN17G0433 Fragaria x ananassa HOM05D005651 ORTHO05D006877 2.2e-16 89.4 76 55.3
Sc25g0005740 Simmondsia chinensis HOM05D005651 ORTHO05D006877 2.2e-16 89.4 75 58.7
Phvul.001G265000 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 2.8e-16 89.0 120 39.2
VMungo1383G2894 Vigna mungo HOM05D005651 ORTHO05D006877 3.7e-16 88.6 75 53.3
CANSAT78G1330 Cannabis sativa HOM05D005651 ORTHO05D006877 4.8e-16 88.2 82 54.9
Gohir.A02G016900 Gossypium hirsutum HOM05D005651 ORTHO05D006877 4.8e-16 88.2 75 57.3
EL10Ac3g07437 Beta vulgaris HOM05D005651 ORTHO05D006877 8.2e-16 87.4 122 37.7
AUR62020881 Chenopodium quinoa HOM05D005651 ORTHO05D006877 8.2e-16 87.4 75 52.0
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 1.4e-15 86.7 122 41.0
Lalb_Chr24g0394531 Lupinus albus HOM05D005651 ORTHO05D006877 1.8e-15 86.3 121 38.8
Phvul.004G062100 Phaseolus vulgaris HOM05D005651 ORTHO05D006877 1.8e-15 86.3 80 48.8
ECA238G0348 Erigeron canadensis HOM05D005651 ORTHO05D006877 2.4e-15 85.9 75 54.7
FvH4_4g12860 Fragaria vesca HOM05D005651 ORTHO05D006877 2.4e-15 85.9 76 52.6
RcHm_v2.0_Chr4g0412451 Rosa chinensis HOM05D005651 ORTHO05D006877 2.4e-15 85.9 76 52.6
FAN12G2514 Fragaria x ananassa HOM05D005651 ORTHO05D006877 3.1e-15 85.5 76 52.6
Gorai.005G022800 Gossypium raimondii HOM05D005651 ORTHO05D006877 3.1e-15 85.5 75 56.0
Ah.04g149640 Amaranthus hybridus HOM05D005651 ORTHO05D006877 4.1e-15 85.1 75 46.7
Gohir.D02G018500 Gossypium hirsutum HOM05D005651 ORTHO05D006877 5.3e-15 84.7 114 43.9
Aa31LG9G3210 Aethionema arabicum HOM05D005651 ORTHO05D006877 9.1e-15 84.0 75 50.7
Thhalv10027320m.g Eutrema salsugineum HOM05D005651 ORTHO05D006877 2.0e-14 82.8 75 49.3
PGR083G1656 Punica granatum HOM05D005651 ORTHO05D006877 2.0e-14 82.8 82 51.2
Sp5g13520 Schrenkiella parvula HOM05D005651 ORTHO05D006877 2.0e-14 82.8 75 50.7
Carub.0007s2821 Capsella rubella HOM05D005651 ORTHO05D006877 3.4e-14 82.0 120 35.0
AUR62018536 Chenopodium quinoa HOM05D005651 ORTHO05D006877 3.4e-14 82.0 75 49.3
C03p35350 Brassica napus HOM05D005651 ORTHO05D006877 4.5e-14 81.6 120 35.8
Migut.G00953 Erythranthe guttata HOM05D005651 ORTHO05D006877 4.5e-14 81.6 75 52.0
Os04g0347800 Oryza sativa ssp. japonica HOM05D005651 ORTHO05D006877 5.9e-14 81.3 75 52.0
Sed0004152 Sechium edule HOM05D005651 ORTHO05D006877 5.9e-14 81.3 117 40.2
CDE02G2388 Ceratophyllum demersum HOM05D005651 ORTHO05D006877 1.0e-13 80.5 81 49.4
Oeu050724.1 Olea europaea HOM05D005651 ORTHO05D006877 1.0e-13 80.5 82 48.8
THA.LOC104808673 Tarenaya hassleriana HOM05D005651 ORTHO05D006877 1.0e-13 80.5 74 48.6
BcaC01g04643 Brassica carinata HOM05D005651 ORTHO05D006877 1.7e-13 79.7 74 48.6
BolC3t15845H Brassica oleracea HOM05D005651 ORTHO05D006877 1.7e-13 79.7 74 48.6
HanXRQChr14g0436391 Helianthus annuus HOM05D005651 ORTHO05D006877 1.7e-13 79.7 76 51.3
AT4G14180 Arabidopsis thaliana HOM05D005651 ORTHO05D006877 2.2e-13 79.3 75 44.0
BcaB01g02715 Brassica carinata HOM05D005651 ORTHO05D006877 2.9e-13 79.0 74 47.3
AL7G42200 Arabidopsis lyrata HOM05D005651 ORTHO05D006877 3.8e-13 78.6 120 33.3
A03p29160 Brassica napus HOM05D005651 ORTHO05D006877 3.8e-13 78.6 74 47.3
Cc03_g09140 Coffea canephora HOM05D005651 ORTHO05D006877 6.5e-13 77.8 120 40.8
CARHR220220 Cardamine hirsuta HOM05D005651 ORTHO05D006877 1.1e-12 77.0 75 45.3
Nitab4.5_0001422g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 1.1e-12 77.0 75 49.3
Lsat_1_v5_gn_2_47921 Lactuca sativa HOM05D005651 ORTHO05D006877 1.9e-12 76.3 85 45.9
Zm00001eb389920 Zea mays HOM05D005651 ORTHO05D006877 1.9e-12 76.3 75 50.7
Peaxi162Scf00017g02338 Petunia axillaris HOM05D005651 ORTHO05D006877 4.2e-12 75.1 73 47.9
SEGI_00340 Sequoiadendron giganteum HOM05D005651 ORTHO05D006877 4.2e-12 75.1 98 44.9
Thecc.04G191000 Theobroma cacao HOM05D005651 ORTHO05D006877 4.2e-12 75.1 123 39.0
Lj5P691T0 Lonicera japonica HOM05D005651 ORTHO05D006877 5.5e-12 74.7 65 58.5
arahy.Tifrunner.gnm1.ann1.EYX4BI Arachis hypogaea HOM05D005651 ORTHO05D006877 9.4e-12 73.9 73 45.2
PGSC0003DMG400024589 Solanum tuberosum HOM05D005651 ORTHO05D006877 2.1e-11 72.8 75 46.7
HPP92_024556 Vanilla planifolia HOM05D005651 ORTHO05D006877 2.1e-11 72.8 88 43.2
arahy.Tifrunner.gnm1.ann1.9V91M6 Arachis hypogaea HOM05D005651 ORTHO05D006877 3.6e-11 72.0 73 43.8
ClCG08G003660 Citrullus lanatus HOM05D005651 ORTHO05D006877 3.6e-11 72.0 117 36.8
TWI56G0421 Tripterygium wilfordii HOM05D005651 ORTHO05D006877 3.6e-11 72.0 74 45.9
MELO3C026127.2 Cucumis melo HOM05D005651 ORTHO05D006877 1.0e-10 70.5 74 44.6
SHI01044 Sapria himalayana HOM05D005651 ORTHO05D006877 1.4e-10 70.1 75 46.7
Eucgr.H02630 Eucalyptus grandis HOM05D005651 ORTHO05D006877 1.8e-10 69.7 74 47.3
Solyc03g114040.3 Solanum lycopersicum HOM05D005651 ORTHO05D006877 1.8e-10 69.7 75 46.7
arahy.Tifrunner.gnm1.ann1.RD9PAU Arachis hypogaea HOM05D005651 ORTHO05D006877 2.3e-10 69.3 73 41.1
CAN.G781.41 Capsicum annuum HOM05D005651 ORTHO05D006877 3.0e-10 68.9 75 45.3
Sopen03g033090 Solanum pennellii HOM05D005651 ORTHO05D006877 3.9e-10 68.6 75 46.7
SalBow1G5228 Salvia bowleyana HOM05D005651 ORTHO05D006877 6.7e-10 67.8 75 45.3
SalBow1G5941 Salvia bowleyana HOM05D005651 ORTHO05D006877 6.7e-10 67.8 75 45.3
CSS0048714 Camellia sinensis var. sinensis HOM05D005651 ORTHO05D006877 7.4e-09 64.3 71 50.7
SGA_v2.0_scaffold12G06118 Striga asiatica HOM05D005651 ORTHO05D006877 1.3e-08 63.5 75 40.0
Prupe.1G176200 Prunus persica HOM05D005651 ORTHO05D006877 2.2e-08 62.8 47 61.7
Nitab4.5_0009569g0060 Nicotiana tabacum HOM05D005651 ORTHO05D006877 6.3e-08 61.2 63 44.4
FAN22G0619 Fragaria x ananassa HOM05D005651 ORTHO05D006877 3.1e-07 58.9 51 54.9


User provided reference genes

Program Settings