Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 0.0e+00 2247.2 1141 100.0
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 1.6e-283 979.9 1139 51.9
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 4.4e-249 865.5 1140 46.9
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 6.4e-248 861.7 1145 47.1
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 5.1e-245 852.0 1112 47.3
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 2.0e-233 813.5 1188 45.9
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 1.8e-218 763.8 1117 44.2
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 1.2e-217 761.1 1140 44.0
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 1.5e-209 734.2 1120 44.1
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 3.2e-207 726.5 1119 44.4
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 8.5e-200 701.8 1124 43.1
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 2.7e-198 696.8 1147 42.5
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 1.4e-197 694.5 1140 41.6
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 2.3e-197 693.7 1133 43.3
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 3.3e-196 689.9 1175 40.9
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 7.5e-188 662.1 1192 40.5
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 1.6e-182 644.4 1170 39.0
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 4.4e-180 636.3 1123 41.0
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 1.3e-179 634.8 1123 41.0
Atru.chr12.1243 Acer truncatum HOM05D007594 ORTHO05D009607 2.0e-177 627.5 1072 42.2
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 4.3e-175 619.8 1179 39.7
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 4.6e-169 599.7 1141 38.0
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 1.7e-168 597.8 1217 38.3
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 8.0e-166 589.0 1078 39.6
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 1.8e-165 587.8 1170 37.3
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 2.3e-165 587.4 1160 38.8
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 6.4e-163 579.3 1124 36.7
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 1.3e-160 571.6 987 40.1
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 3.0e-160 570.5 1250 37.0
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 3.3e-159 567.0 1148 36.9
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 1.4e-157 561.6 1166 36.3
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 3.1e-157 560.5 1164 35.7
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 5.8e-156 556.2 1232 36.8
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 3.7e-155 553.5 1174 36.0
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 3.7e-155 553.5 1148 35.8
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 1.1e-154 552.0 1170 36.3
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 1.9e-154 551.2 1198 35.6
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 3.0e-152 543.9 1168 36.4
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 1.9e-151 541.2 1144 36.0
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 3.6e-150 537.0 954 40.7
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 5.2e-149 533.1 1081 36.5
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 5.8e-148 529.6 1225 35.8
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 2.9e-147 527.3 1217 36.3
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 2.9e-147 527.3 1160 34.6
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 1.2e-145 521.9 1342 32.7
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 4.6e-145 520.0 1078 36.3
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 1.7e-144 518.1 1113 36.0
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 1.1e-143 515.4 1146 34.5
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 1.3e-139 501.9 1185 35.4
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 1.1e-138 498.8 1079 34.8
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 8.7e-136 489.2 1125 35.9
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 6.4e-131 473.0 1051 34.5
AUR62002319 Chenopodium quinoa HOM05D007594 ORTHO05D009607 4.2e-130 470.3 1191 34.1
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 3.9e-128 463.8 1005 36.6
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 1.1e-127 462.2 1108 33.9
Nn7g38492 Nelumbo nucifera HOM05D007594 ORTHO05D009607 4.9e-123 446.8 771 41.4
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 6.2e-118 429.9 1125 31.9
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 1.5e-116 425.2 960 36.2
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 8.4e-115 419.5 1162 31.6
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 1.3e-112 412.1 1150 32.0
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 6.7e-112 409.8 1183 31.7
Hund03165 Selenicereus undatus HOM05D007594 ORTHO05D009607 1.0e-107 396.0 1028 33.9
Hund03166 Selenicereus undatus HOM05D007594 ORTHO05D009607 5.0e-107 393.7 1030 33.4
Ca_14092_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 1.9e-106 391.7 1018 34.0
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 6.1e-105 386.7 628 40.0
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 1.5e-103 382.1 1148 32.1
Aqoxy1G00417 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 1.0e-99 369.4 743 36.9
TPR.G1438 Trifolium pratense HOM05D007594 ORTHO05D009607 4.2e-98 364.0 1062 32.3
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 3.0e-96 357.8 624 38.5
Lalb_Chr24g0402831 Lupinus albus HOM05D007594 ORTHO05D009607 4.7e-89 334.0 988 32.2
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 1.5e-87 328.9 1161 27.9
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 3.1e-85 321.2 418 44.0
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 7.5e-79 300.1 1167 28.8
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 8.2e-78 296.6 397 45.6
MELO3C011810.2 Cucumis melo HOM05D007594 ORTHO05D009607 3.0e-72 278.1 908 30.2
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 3.7e-70 271.2 922 30.6
Migut.B01185 Erythranthe guttata HOM05D007594 ORTHO05D009607 2.7e-68 265.0 302 47.0
Nn032s41616 Nelumbo nucifera HOM05D007594 ORTHO05D009607 3.8e-67 261.2 181 67.4
Ca_14091_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 2.7e-60 238.4 912 29.8
Zm00001eb062110 Zea mays HOM05D007594 ORTHO05D009607 1.0e-59 236.5 656 31.4
Sc11g0006290 Simmondsia chinensis HOM05D007594 ORTHO05D009607 1.6e-52 212.6 475 35.8
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 1.2e-47 196.4 910 27.5
Hund03164 Selenicereus undatus HOM05D007594 ORTHO05D009607 1.2e-39 169.9 137 58.4
Lalb_Chr24g0402821 Lupinus albus HOM05D007594 ORTHO05D009607 9.9e-39 166.8 146 55.5
CSS0016538 Camellia sinensis var. sinensis HOM05D007594 ORTHO05D009607 8.7e-27 127.1 97 62.9
Atru.chr12.1242 Acer truncatum HOM05D007594 ORTHO05D009607 6.9e-24 117.5 90 64.4
ATR0445G001 Amborella trichopoda HOM05D007594 ORTHO05D009607 1.0e-19 103.6 199 37.7
AagrBONN_evm.TU.Sc2ySwM_368.2306 Anthoceros agrestis HOM05D007594 ORTHO05D009607 1.1e-16 93.6 153 34.6
Lj2g0024514 Lotus japonicus HOM05D007594 ORTHO05D009607 4.0e-16 91.7 64 67.2
Aqoxy1G00418 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 5.3e-16 91.3 58 70.7
Aqoxy1G00416 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 1.7e-14 86.3 89 49.4
SEGI_25891 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 6.4e-14 84.3 362 27.9
SEGI_38959 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 1.2e-12 80.1 73 47.9
COL.COLO4_04921 Corchorus olitorius HOM05D007594 ORTHO05D009607 1.9e-10 72.8 60 60.0
vmacro13770 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 5.6e-10 71.2 54 63.0
CBR_g49793 Chara braunii HOM05D000019 ORTHO05D000048 2.8e-09 68.9 141 31.9
Sopen07g024520 Solanum pennellii HOM05D007594 ORTHO05D009607 1.3e-06 60.1 89 40.4


User provided reference genes

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