Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1979 Trochodendron aralioides HOM05D003072 ORTHO05D009443 4.4e-62 241.1 122 100.0
TAR376G0625 Trochodendron aralioides HOM05D003072 ORTHO05D009443 2.6e-30 135.6 123 64.2
Nn5g29426 Nelumbo nucifera HOM05D003072 ORTHO05D009443 3.3e-17 92.0 115 49.6
GSVIVG01009618001 Vitis vinifera HOM05D003072 ORTHO05D009443 9.9e-14 80.5 115 42.6
Haze_17605 Corylus avellana HOM05D003072 ORTHO05D009443 2.2e-13 79.3 120 42.5
Cfa018463 Carpinus fangiana HOM05D003072 ORTHO05D009443 8.4e-13 77.4 120 41.7
Aqoxy6G00956 Aquilegia oxysepala HOM05D003072 ORTHO05D009443 1.2e-11 73.6 100 48.0
Atru.chr13.578 Acer truncatum HOM05D003072 ORTHO05D009443 1.6e-11 73.2 118 37.3
vmacro04484 Vaccinium macrocarpon HOM05D003072 ORTHO05D009443 1.6e-11 73.2 99 41.4
Prupe.1G386100 Prunus persica HOM05D003072 ORTHO05D009443 7.9e-11 70.9 131 36.6
Ciclev10001600m.g Citrus clementina HOM05D003072 ORTHO05D009443 1.0e-10 70.5 118 34.7
Hund17634 Selenicereus undatus HOM05D003072 ORTHO05D009443 1.3e-10 70.1 121 39.7
MD00G1038500 Malus domestica HOM05D003072 ORTHO05D009443 5.1e-10 68.2 103 40.8
QL02p007030 Quercus lobata HOM05D003072 ORTHO05D009443 8.7e-10 67.4 128 38.3
RcHm_v2.0_Chr6g0300231 Rosa chinensis HOM05D003072 ORTHO05D009443 8.7e-10 67.4 115 37.4
Manes.18G031666 Manihot esculenta HOM05D003072 ORTHO05D009443 1.1e-09 67.0 117 38.5
PGSC0003DMG400016893 Solanum tuberosum HOM05D003072 ORTHO05D009443 1.1e-09 67.0 117 41.0
Nitab4.5_0000110g0050 Nicotiana tabacum HOM05D003072 ORTHO05D009443 1.9e-09 66.2 106 41.5
CAN.G371.113 Capsicum annuum HOM05D003072 ORTHO05D009443 2.5e-09 65.9 107 40.2
FvH4_2g40500 Fragaria vesca HOM05D003072 ORTHO05D009443 2.5e-09 65.9 115 36.5
Thecc.08G019800 Theobroma cacao HOM05D003072 ORTHO05D009443 2.5e-09 65.9 116 37.1
Cpa.g.sc64.27 Carica papaya HOM05D003072 ORTHO05D009443 3.3e-09 65.5 114 38.6
Nitab4.5_0009288g0010 Nicotiana tabacum HOM05D003072 ORTHO05D009443 4.3e-09 65.1 106 40.6
COL.COLO4_26395 Corchorus olitorius HOM05D003072 ORTHO05D009443 5.6e-09 64.7 120 36.7
Cc10_g03560 Coffea canephora HOM05D003072 ORTHO05D009443 7.4e-09 64.3 77 49.4
FAN15G3681 Fragaria x ananassa HOM05D003072 ORTHO05D009443 7.4e-09 64.3 105 37.1
Duzib093G0429 Durio zibethinus HOM05D003072 ORTHO05D009443 9.6e-09 63.9 109 37.6
Hma1.2p1_0260F.1_g104410 Hydrangea macrophylla HOM05D003072 ORTHO05D009443 9.6e-09 63.9 126 34.9
Sabra14G0028200 Salix brachista HOM05D003072 ORTHO05D009443 9.6e-09 63.9 119 33.6
Sc02g0006710 Simmondsia chinensis HOM05D003072 ORTHO05D009443 1.6e-08 63.2 101 41.6
FAN27G3309 Fragaria x ananassa HOM05D003072 ORTHO05D009592 2.8e-08 62.4 115 35.7
PSO541G1128 Papaver somniferum HOM05D003072 ORTHO05D009443 2.8e-08 62.4 98 44.9
VMungo1309G1112 Vigna mungo HOM05D003072 ORTHO05D009443 2.8e-08 62.4 115 38.3
FAN20G0170 Fragaria x ananassa HOM05D003072 ORTHO05D009443 6.2e-08 61.2 115 35.7
Sopen04g033320 Solanum pennellii HOM05D003072 ORTHO05D009443 6.2e-08 61.2 117 38.5
Glyma.04G034900 Glycine max HOM05D003072 ORTHO05D009443 1.1e-07 60.5 102 39.2
PSO675G7593 Papaver somniferum HOM05D003072 ORTHO05D009443 1.1e-07 60.5 103 43.7
Solyc04g079740.3 Solanum lycopersicum HOM05D003072 ORTHO05D009443 1.1e-07 60.5 117 38.5
ATR0733G073 Amborella trichopoda HOM05D003072 ORTHO05D009443 1.8e-07 59.7 54 53.7
CiPaw.15G069000 Carya illinoinensis HOM05D003072 ORTHO05D009443 1.8e-07 59.7 114 38.6
Lj4A782G66 Lonicera japonica HOM05D003072 ORTHO05D009443 1.8e-07 59.7 110 35.5
Potri.014G038800 Populus trichocarpa HOM05D003072 ORTHO05D009443 2.4e-07 59.3 109 33.9
Rhsim12G0123500 Rhododendron simsii HOM05D003072 ORTHO05D009443 2.4e-07 59.3 100 40.0
Phvul.009G055400 Phaseolus vulgaris HOM05D003072 ORTHO05D009443 3.1e-07 58.9 106 40.6
MBI16_g39765_MAGBIO Magnolia biondii HOM05D003072 ORTHO05D009443 4.0e-07 58.5 73 49.3
Glyma.06G034900 Glycine max HOM05D003072 ORTHO05D009443 1.5e-06 56.6 100 38.0
Peaxi162Scf00280g00078 Petunia axillaris HOM05D003072 ORTHO05D009443 1.5e-06 56.6 106 36.8
arahy.Tifrunner.gnm1.ann1.32RDWE Arachis hypogaea HOM05D003072 ORTHO05D009443 2.6e-06 55.8 97 38.1
arahy.Tifrunner.gnm1.ann1.KZ56XT Arachis hypogaea HOM05D003072 ORTHO05D009443 2.6e-06 55.8 97 38.1
AUR62033869 Chenopodium quinoa HOM05D003072 ORTHO05D009443 2.6e-06 55.8 142 30.3
SalBow7G3284 Salvia bowleyana HOM05D003072 ORTHO05D009443 2.6e-06 55.8 50 54.0
Medtr3g111540 Medicago truncatula HOM05D003072 ORTHO05D009443 4.5e-06 55.1 120 36.7
THA.LOC104803397 Tarenaya hassleriana HOM05D003072 ORTHO05D009443 5.8e-06 54.7 75 45.3
MSTRG.1311 Avicennia marina HOM05D003072 ORTHO05D009443 7.6e-06 54.3 93 37.6
Gohir.A06G013100 Gossypium hirsutum HOM05D003072 ORTHO05D009443 7.6e-06 54.3 50 54.0


User provided reference genes

Program Settings