Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1891 Trochodendron aralioides HOM05D008415 ORTHO05D010601 5.4e-162 574.3 298 100.0
Dinv32770 Davidia involucrata HOM05D008415 ORTHO05D010601 3.1e-61 239.6 286 49.0
QL01p023166 Quercus lobata HOM05D008415 ORTHO05D010601 9.7e-55 218.0 297 48.1
vmacro14451 Vaccinium macrocarpon HOM05D008415 ORTHO05D010601 9.7e-55 218.0 287 46.7
Solyc11g069210.2 Solanum lycopersicum HOM05D008415 ORTHO05D010601 2.9e-51 206.5 258 49.6
Oeu059099.1 Olea europaea HOM05D008415 ORTHO05D010601 8.5e-51 204.9 297 44.4
PGSC0003DMG400008064 Solanum tuberosum HOM05D008415 ORTHO05D010601 1.5e-50 204.1 258 49.6
Rhsim01G0218700 Rhododendron simsii HOM05D008415 ORTHO05D010601 2.5e-50 203.4 275 48.4
Sopen11g027940 Solanum pennellii HOM05D008415 ORTHO05D010601 2.1e-49 200.3 258 49.2
Nitab4.5_0000650g0050 Nicotiana tabacum HOM05D008415 ORTHO05D010601 2.7e-49 199.9 298 44.0
Peaxi162Scf00351g00214 Petunia axillaris HOM05D008415 ORTHO05D010601 2.7e-49 199.9 294 43.2
Cc01_g11390 Coffea canephora HOM05D008415 ORTHO05D010601 4.7e-49 199.1 275 44.7
Actinidia03741 Actinidia chinensis HOM05D008415 ORTHO05D010601 2.3e-48 196.8 269 46.1
CSS0041118 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 3.0e-48 196.4 283 43.5
CAN.G631.8 Capsicum annuum HOM05D008415 ORTHO05D010601 7.5e-47 191.8 277 46.2
GSVIVG01025161001 Vitis vinifera HOM05D008415 ORTHO05D010601 2.8e-46 189.9 253 45.5
Lsat_1_v5_gn_2_98161 Lactuca sativa HOM05D008415 ORTHO05D010601 1.5e-42 177.6 256 43.8
SalBow3G0300 Salvia bowleyana HOM05D008415 ORTHO05D010601 4.2e-42 176.0 279 41.9
MELO3C025762.2 Cucumis melo HOM05D008415 ORTHO05D010601 7.2e-42 175.3 299 39.8
Sed0001336 Sechium edule HOM05D008415 ORTHO05D010601 4.7e-41 172.6 291 40.2
PGR119G0199 Punica granatum HOM05D008415 ORTHO05D010601 3.0e-40 169.9 240 44.6
MSTRG.18650 Avicennia marina HOM05D008415 ORTHO05D010601 5.2e-40 169.1 287 41.5
Eucgr.J00943 Eucalyptus grandis HOM05D008415 ORTHO05D010601 8.8e-40 168.3 335 36.4
CsaV3_6G021730 Cucumis sativus L. HOM05D008415 ORTHO05D010601 1.2e-39 167.9 299 38.1
Haze_23892 Corylus avellana HOM05D008415 ORTHO05D010601 3.4e-39 166.4 257 42.0
ECA238G2082 Erigeron canadensis HOM05D008415 ORTHO05D010601 1.1e-37 161.4 297 38.7
CSS0005479 Camellia sinensis var. sinensis HOM05D008415 ORTHO05D010601 4.1e-37 159.5 217 46.1
ClCG02G021040 Citrullus lanatus HOM05D008415 ORTHO05D010601 5.4e-37 159.1 301 38.9
Migut.D02196 Erythranthe guttata HOM05D008415 ORTHO05D010601 3.5e-36 156.4 285 39.3
SGA_v2.0_scaffold61G21159 Striga asiatica HOM05D008415 ORTHO05D010601 7.7e-36 155.2 274 38.3
HanXRQChr14g0445691 Helianthus annuus HOM05D008415 ORTHO05D010601 2.3e-35 153.7 279 38.0
Hma1.2p1_2585F.1_g324920 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 2.3e-35 153.7 149 58.4
Glyma.11G154841 Glycine max HOM05D008415 ORTHO05D010601 2.9e-35 153.3 252 38.9
Hma1.2p1_1931F.1_g307990 Hydrangea macrophylla HOM05D008415 ORTHO05D010601 2.9e-35 153.3 149 58.4
Glyma.12G070700 Glycine max HOM05D008415 ORTHO05D010601 1.5e-34 151.0 262 39.3
Psat7g223880 Pisum sativum HOM05D008415 ORTHO05D010601 1.9e-34 150.6 259 40.5
Lalb_Chr19g0137361 Lupinus albus HOM05D008415 ORTHO05D010601 1.5e-31 141.0 216 42.1
unitig_46.g18232 Utricularia gibba HOM05D008415 ORTHO05D010601 4.4e-31 139.4 263 36.5
arahy.Tifrunner.gnm1.ann1.C7LIDW Arachis hypogaea HOM05D008415 ORTHO05D010601 8.3e-30 135.2 279 35.8
arahy.Tifrunner.gnm1.ann1.TY33PY Arachis hypogaea HOM05D008415 ORTHO05D010601 3.2e-29 133.3 283 35.3
VMungo1127G1728 Vigna mungo HOM05D008415 ORTHO05D010601 2.7e-28 130.2 219 40.2
Ca_19250_v3 Cicer arietinum L. HOM05D008415 ORTHO05D010601 1.7e-27 127.5 115 53.0
Lj3g0013437 Lotus japonicus HOM05D008415 ORTHO05D010601 8.6e-27 125.2 265 35.5
Medtr4g060050 Medicago truncatula HOM05D008415 ORTHO05D010601 2.5e-26 123.6 221 39.4
CiPaw.14G078500 Carya illinoinensis HOM05D008415 ORTHO05D010601 3.3e-26 123.2 94 62.8
Aqoxy2G01080 Aquilegia oxysepala HOM05D008415 ORTHO05D010601 1.8e-24 117.5 94 58.5
CANSAT54G1687 Cannabis sativa HOM05D008415 ORTHO05D010601 1.8e-24 117.5 287 34.8
Phvul.011G073700 Phaseolus vulgaris HOM05D008415 ORTHO05D010601 3.4e-23 113.2 77 66.2
Potri.016G129250 Populus trichocarpa HOM05D008415 ORTHO05D010601 1.1e-18 98.2 274 32.8
TPR.G15532 Trifolium pratense HOM05D008415 ORTHO05D010601 1.1e-18 98.2 127 41.7
Cc07_g02980 Coffea canephora HOM05D008415 ORTHO05D010601 7.3e-18 95.5 107 43.9
Os03g0288900 Oryza sativa ssp. japonica HOM05D008415 ORTHO05D010601 9.5e-18 95.1 119 43.7
SEGI_01090 Sequoiadendron giganteum HOM05D005535 ORTHO05D006753 3.7e-14 83.2 254 31.9
Nn3g17153 Nelumbo nucifera HOM05D005535 ORTHO05D006753 1.6e-12 77.8 112 38.4
Nitab4.5_0004931g0020 Nicotiana tabacum HOM05D005535 ORTHO05D006753 4.6e-12 76.3 112 38.4
HPP92_024074 Vanilla planifolia HOM05D005535 ORTHO05D006753 4.6e-12 76.3 149 36.9
Medtr4g108100 Medicago truncatula HOM05D005535 ORTHO05D006753 1.3e-11 74.7 238 28.6
Hma1.2p1_0104F.1_g050150 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 1.7e-11 74.3 108 37.0
Nitab4.5_0000269g0110 Nicotiana tabacum HOM05D005535 ORTHO05D006753 1.7e-11 74.3 112 38.4
Thecc.03G081300 Theobroma cacao HOM05D005535 ORTHO05D006753 2.3e-11 73.9 114 36.0
Os06g0589500 Oryza sativa ssp. japonica HOM05D005535 ORTHO05D006753 5.1e-11 72.8 246 28.5
PGSC0003DMG400033073 Solanum tuberosum HOM05D005535 ORTHO05D006753 8.6e-11 72.0 136 35.3
Peaxi162Scf00009g00219 Petunia axillaris HOM05D005535 ORTHO05D006753 1.1e-10 71.6 251 28.7
RcHm_v2.0_Chr7g0180761 Rosa chinensis HOM05D005535 ORTHO05D006753 4.3e-10 69.7 160 35.0
Hma1.2p1_1617F.1_g293810 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 5.6e-10 69.3 248 28.6
Oeu022201.1 Olea europaea HOM05D005535 ORTHO05D006753 5.6e-10 69.3 218 29.4
TWI60G0583 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 5.6e-10 69.3 93 45.2
Dinv19929 Davidia involucrata HOM05D005535 ORTHO05D006753 7.3e-10 68.9 128 34.4
Rhsim08G0158400 Rhododendron simsii HOM05D005535 ORTHO05D006753 9.5e-10 68.6 145 31.7
Prupe.5G188200 Prunus persica HOM05D005535 ORTHO05D006753 1.2e-09 68.2 97 38.1
Potri.015G063700 Populus trichocarpa HOM05D005535 ORTHO05D006753 1.6e-09 67.8 88 43.2
Lj4g0008602 Lotus japonicus HOM05D005535 ORTHO05D006753 2.1e-09 67.4 182 27.5
TPR.G27376 Trifolium pratense HOM05D005535 ORTHO05D006753 2.1e-09 67.4 208 27.4
Zm00001eb386190 Zea mays HOM05D005535 ORTHO05D006753 2.1e-09 67.4 226 27.9
FAN08G2745 Fragaria x ananassa HOM05D005535 ORTHO05D006753 2.8e-09 67.0 147 35.4
PSO017G0680 Papaver somniferum HOM05D005535 ORTHO05D006753 2.8e-09 67.0 210 30.0
Peaxi162Scf00013g00129 Petunia axillaris HOM05D005535 ORTHO05D006753 2.8e-09 67.0 161 32.9
CAN.G628.33 Capsicum annuum HOM05D005535 ORTHO05D006753 3.6e-09 66.6 148 33.8
Lj1g0015301 Lotus japonicus HOM05D005535 ORTHO05D006753 3.6e-09 66.6 225 30.7
PSO478G1818 Papaver somniferum HOM05D005535 ORTHO05D006753 3.6e-09 66.6 215 28.8
PSO591G0334 Papaver somniferum HOM05D005535 ORTHO05D006753 3.6e-09 66.6 142 33.1
unitig_26.g9639 Utricularia gibba HOM05D005535 ORTHO05D006753 3.6e-09 66.6 165 32.1
AUR62021726 Chenopodium quinoa HOM05D005535 ORTHO05D006753 4.7e-09 66.2 148 33.1
Eucgr.B00441 Eucalyptus grandis HOM05D005535 ORTHO05D006753 4.7e-09 66.2 160 32.5
QL10p015851 Quercus lobata HOM05D005535 ORTHO05D006753 4.7e-09 66.2 187 29.4
Sc10g0009960 Simmondsia chinensis HOM05D005535 ORTHO05D006753 4.7e-09 66.2 224 29.0
SGA_v2.0_scaffold162G37926 Striga asiatica HOM05D005535 ORTHO05D006753 6.2e-09 65.9 72 47.2
AUR62008371 Chenopodium quinoa HOM05D005535 ORTHO05D006753 1.1e-08 65.1 150 32.7
ClCG06G016340 Citrullus lanatus HOM05D005535 ORTHO05D006753 1.1e-08 65.1 204 30.9
ECA232G4425 Erigeron canadensis HOM05D005535 ORTHO05D006753 1.1e-08 65.1 108 37.0
FAN18G1286 Fragaria x ananassa HOM05D005535 ORTHO05D006753 1.1e-08 65.1 150 33.3
Psat4g052400 Pisum sativum HOM05D005535 ORTHO05D006753 1.1e-08 65.1 176 31.2
Sed0009946 Sechium edule HOM05D005535 ORTHO05D006753 1.1e-08 65.1 238 29.8
Sopen03g032160 Solanum pennellii HOM05D005535 ORTHO05D006753 1.1e-08 65.1 243 28.0
PGSC0003DMG401018143 Solanum tuberosum HOM05D005535 ORTHO05D006753 1.1e-08 65.1 249 27.7
TAR629G1161 Trochodendron aralioides HOM05D005535 ORTHO05D006753 1.1e-08 65.1 121 36.4
Zm00001eb277070 Zea mays HOM05D005535 ORTHO05D006753 1.1e-08 65.1 170 31.2
MBI01_g12912_MAGBIO Magnolia biondii HOM05D005535 ORTHO05D006753 1.4e-08 64.7 228 28.5
Ah.02g113290 Amaranthus hybridus HOM05D005535 ORTHO05D006753 1.8e-08 64.3 194 29.9
Actinidia34981 Actinidia chinensis HOM05D005535 ORTHO05D006753 2.3e-08 63.9 151 32.5
Cfa018977 Carpinus fangiana HOM05D005535 ORTHO05D006753 2.3e-08 63.9 183 28.4
MELO3C017158.2 Cucumis melo HOM05D005535 ORTHO05D006753 2.3e-08 63.9 218 31.2
Duzib084G1387 Durio zibethinus HOM05D005535 ORTHO05D006753 2.3e-08 63.9 203 25.6
Duzib205G0302 Durio zibethinus HOM05D005535 ORTHO05D006753 2.3e-08 63.9 202 25.2
Sopen06g027240 Solanum pennellii HOM05D005535 ORTHO05D006753 2.3e-08 63.9 163 27.6
vmacro16564 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 2.3e-08 63.9 244 27.9
SalBow5G0107 Salvia bowleyana HOM05D005535 ORTHO05D006753 3.1e-08 63.5 197 28.4
SalBow5G2281 Salvia bowleyana HOM05D005535 ORTHO05D006753 3.1e-08 63.5 197 27.4
Actinidia04914 Actinidia chinensis HOM05D005535 ORTHO05D006753 4.0e-08 63.2 91 39.6
FvH4_5g15300 Fragaria vesca HOM05D005535 ORTHO05D006753 4.0e-08 63.2 161 32.9
FAN13G1299 Fragaria x ananassa HOM05D005535 ORTHO05D006753 4.0e-08 63.2 161 33.5
Nitab4.5_0004785g0010 Nicotiana tabacum HOM05D005535 ORTHO05D006753 4.0e-08 63.2 251 28.3
Glyma.04G173200 Glycine max HOM05D005535 ORTHO05D006753 5.2e-08 62.8 139 29.5
Manes.06G095400 Manihot esculenta HOM05D005535 ORTHO05D006753 5.2e-08 62.8 178 28.1
Aqoxy3G00718 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 6.8e-08 62.4 123 33.3
COL.COLO4_14041 Corchorus olitorius HOM05D005535 ORTHO05D006753 6.8e-08 62.4 243 26.7
Glyma.05G028700 Glycine max HOM05D005535 ORTHO05D006753 6.8e-08 62.4 172 30.8
HanXRQChr05g0158021 Helianthus annuus HOM05D005535 ORTHO05D006753 6.8e-08 62.4 156 32.7
CSS0007998 Camellia sinensis var. sinensis HOM05D005535 ORTHO05D006753 8.9e-08 62.0 235 27.2
Lsat_1_v5_gn_5_19040 Lactuca sativa HOM05D005535 ORTHO05D006753 8.9e-08 62.0 70 44.3
Solyc03g113090.3 Solanum lycopersicum HOM05D005535 ORTHO05D006753 8.9e-08 62.0 177 31.6
Solyc06g070970.3 Solanum lycopersicum HOM05D005535 ORTHO05D006753 8.9e-08 62.0 164 28.7
ATR1120G167 Amborella trichopoda HOM05D005535 ORTHO05D006753 1.2e-07 61.6 212 29.2
BcaB02g09657 Brassica carinata HOM05D005535 ORTHO05D006753 1.2e-07 61.6 178 26.4
Lj9A460T58 Lonicera japonica HOM05D005535 ORTHO05D006753 1.2e-07 61.6 181 29.3
Lalb_Chr12g0196771 Lupinus albus HOM05D005535 ORTHO05D006753 1.2e-07 61.6 199 29.1
PSO832G1146 Papaver somniferum HOM05D005535 ORTHO05D006753 1.2e-07 61.6 232 26.7
VMungo1309G2126 Vigna mungo HOM05D005535 ORTHO05D006753 1.2e-07 61.6 139 33.8
Cpa.g.sc17.224 Carica papaya HOM05D005535 ORTHO05D006753 1.5e-07 61.2 97 35.1
CsaV3_1G002190 Cucumis sativus L. HOM05D005535 ORTHO05D006753 1.5e-07 61.2 288 27.8
Migut.I00138 Erythranthe guttata HOM05D005535 ORTHO05D006753 1.5e-07 61.2 160 31.2
Glyma.17G098100 Glycine max HOM05D005535 ORTHO05D006753 1.5e-07 61.2 208 29.8
Lj5A114T27 Lonicera japonica HOM05D005535 ORTHO05D006753 1.5e-07 61.2 159 32.1
Gohir.D12G178800 Gossypium hirsutum HOM05D005535 ORTHO05D006753 2.0e-07 60.8 263 26.6
MD06G1189400 Malus domestica HOM05D005535 ORTHO05D006753 2.0e-07 60.8 147 34.0
Sabra15G0089300 Salix brachista HOM05D005535 ORTHO05D006753 2.0e-07 60.8 195 31.8
SGA_v2.0_scaffold56G20044 Striga asiatica HOM05D005535 ORTHO05D006753 2.0e-07 60.8 140 32.9
TAR371G0260 Trochodendron aralioides HOM05D005535 ORTHO05D006753 2.0e-07 60.8 198 28.3
Actinidia37646 Actinidia chinensis HOM05D005535 ORTHO05D006753 2.6e-07 60.5 166 30.1
arahy.Tifrunner.gnm1.ann1.WGP01G Arachis hypogaea HOM05D005535 ORTHO05D006753 2.6e-07 60.5 224 26.3
CiPaw.12G015700 Carya illinoinensis HOM05D005535 ORTHO05D006753 2.6e-07 60.5 180 29.4
Dinv38677 Davidia involucrata HOM05D005535 ORTHO05D006753 2.6e-07 60.5 247 26.3
Thhalv10004313m.g Eutrema salsugineum HOM05D005535 ORTHO05D006753 2.6e-07 60.5 178 27.5
Glyma.06G191000 Glycine max HOM05D005535 ORTHO05D006753 2.6e-07 60.5 145 29.7
Nitab4.5_0000785g0140 Nicotiana tabacum HOM05D005535 ORTHO05D006753 2.6e-07 60.5 265 26.8
Atru.chr9.2302 Acer truncatum HOM05D005535 ORTHO05D006753 3.4e-07 60.1 242 26.9
MSTRG.11394 Avicennia marina HOM05D005535 ORTHO05D006753 3.4e-07 60.1 158 30.4
Gorai.008G191600 Gossypium raimondii HOM05D005535 ORTHO05D006753 3.4e-07 60.1 212 26.9
Sp2g25720 Schrenkiella parvula HOM05D005535 ORTHO05D006753 3.4e-07 60.1 198 24.2
Phvul.009G189600 Phaseolus vulgaris HOM05D005535 ORTHO05D006753 4.4e-07 59.7 139 33.8
TWI34G0031 Tripterygium wilfordii HOM05D005535 ORTHO05D006753 4.4e-07 59.7 184 27.7
EL10Ac5g10956 Beta vulgaris HOM05D005535 ORTHO05D006753 5.8e-07 59.3 253 24.1
A06p29250 Brassica napus HOM05D005535 ORTHO05D006753 5.8e-07 59.3 194 26.8
Gohir.A12G175600 Gossypium hirsutum HOM05D005535 ORTHO05D006753 5.8e-07 59.3 210 27.1
vmacro17524 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 5.8e-07 59.3 153 32.0
BraA06t25881Z Brassica rapa HOM05D005535 ORTHO05D006753 7.6e-07 58.9 197 26.9
Oeu006178.3 Olea europaea HOM05D005535 ORTHO05D006753 7.6e-07 58.9 177 27.7
Ca_21840_v3 Cicer arietinum L. HOM05D005535 ORTHO05D006753 1.7e-06 57.8 255 26.7
Ciclev10020848m.g Citrus clementina HOM05D005535 ORTHO05D006753 2.2e-06 57.4 142 35.9
FAN04G1197 Fragaria x ananassa HOM05D005535 ORTHO05D006753 2.2e-06 57.4 157 31.8
MD14G1196400 Malus domestica HOM05D005535 ORTHO05D006753 2.2e-06 57.4 226 28.8
VMungo1215G1657 Vigna mungo HOM05D005535 ORTHO05D006753 2.2e-06 57.4 226 25.7
Hund09363 Selenicereus undatus HOM05D005535 ORTHO05D006753 2.9e-06 57.0 176 30.7
Sed0000211 Sechium edule HOM05D005535 ORTHO05D006753 3.8e-06 56.6 231 26.8
BcaC01g02485 Brassica carinata HOM05D005535 ORTHO05D006753 4.9e-06 56.2 222 24.8
C03p64280 Brassica napus HOM05D005535 ORTHO05D006753 4.9e-06 56.2 222 24.8
BolC3t18683H Brassica oleracea HOM05D005535 ORTHO05D006753 4.9e-06 56.2 222 24.8
Aa31LG11G1090 Aethionema arabicum HOM05D005535 ORTHO05D006753 6.4e-06 55.8 182 28.0
arahy.Tifrunner.gnm1.ann1.G5WMYY Arachis hypogaea HOM05D005535 ORTHO05D006753 6.4e-06 55.8 225 24.4
Actinidia19054 Actinidia chinensis HOM05D005535 ORTHO05D006753 8.4e-06 55.5 177 29.4
AL8G39440 Arabidopsis lyrata HOM05D005535 ORTHO05D006753 8.4e-06 55.5 185 27.0
Rhsim12G0158200 Rhododendron simsii HOM05D005535 ORTHO05D006753 8.4e-06 55.5 236 28.0


User provided reference genes

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