Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 1.9e-248 862.1 441 100.0
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.3e-225 785.4 442 90.7
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 1.3e-217 759.6 443 87.1
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 3.1e-214 748.4 436 87.2
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 1.5e-213 746.1 429 88.3
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 1.9e-211 739.2 437 85.1
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 3.5e-210 734.9 438 85.2
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 2.1e-207 725.7 442 83.3
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 2.8e-207 725.3 436 82.8
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 6.2e-207 724.2 436 84.2
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 4.0e-206 721.5 441 82.8
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 2.0e-205 719.2 441 83.2
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 4.9e-204 714.5 442 82.6
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 1.1e-203 713.4 443 81.5
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 1.2e-202 709.9 440 82.5
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 7.8e-202 707.2 443 81.0
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 7.8e-202 707.2 458 79.9
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 1.3e-201 706.4 438 82.6
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 1.7e-201 706.1 436 82.1
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 2.3e-201 705.7 442 80.1
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 3.9e-201 704.9 435 81.4
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 6.6e-201 704.1 429 82.8
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 8.7e-201 703.7 439 81.1
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 1.5e-200 703.0 438 81.1
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 1.9e-200 702.6 440 81.6
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 4.3e-200 701.4 434 81.6
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 9.6e-200 700.3 414 83.8
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 9.6e-200 700.3 428 81.8
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 9.6e-200 700.3 428 81.8
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 9.6e-200 700.3 441 80.5
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 2.1e-199 699.1 444 81.3
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.1e-199 699.1 438 79.7
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 2.1e-199 699.1 400 86.0
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 4.7e-199 698.0 442 80.8
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 6.2e-199 697.6 440 79.1
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 1.1e-198 696.8 444 79.1
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 1.4e-198 696.4 437 81.9
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.8e-198 696.0 438 79.5
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 2.4e-198 695.7 455 78.9
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 2.4e-198 695.7 440 79.1
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 2.4e-198 695.7 428 81.5
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 6.9e-198 694.1 408 85.5
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 6.9e-198 694.1 428 81.3
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 9.0e-198 693.7 435 80.5
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 9.0e-198 693.7 443 79.2
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 1.2e-197 693.3 441 79.8
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.5e-197 693.0 440 78.4
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 2.0e-197 692.6 428 80.6
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 2.6e-197 692.2 440 78.6
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 2.6e-197 692.2 440 78.6
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 4.4e-197 691.4 442 80.8
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 4.4e-197 691.4 442 80.8
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 5.8e-197 691.0 445 80.4
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 7.6e-197 690.6 430 80.7
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 9.9e-197 690.3 441 79.8
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 1.3e-196 689.9 428 81.5
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.7e-196 689.5 428 82.5
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 1.7e-196 689.5 411 83.9
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 3.8e-196 688.3 428 80.4
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 3.8e-196 688.3 428 80.4
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 4.9e-196 688.0 438 80.1
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 4.9e-196 688.0 428 80.4
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 6.4e-196 687.6 428 80.1
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 6.4e-196 687.6 428 80.1
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 6.4e-196 687.6 428 80.1
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 8.4e-196 687.2 429 80.9
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 1.1e-195 686.8 428 80.1
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 1.1e-195 686.8 428 80.1
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 1.4e-195 686.4 430 82.1
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 1.9e-195 686.0 430 79.8
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 1.9e-195 686.0 436 79.4
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 2.4e-195 685.6 428 79.9
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 2.4e-195 685.6 429 81.1
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 3.2e-195 685.3 430 80.5
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 3.2e-195 685.3 428 82.2
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 3.2e-195 685.3 443 78.1
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 3.2e-195 685.3 430 80.5
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 4.2e-195 684.9 428 79.9
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 4.2e-195 684.9 442 79.4
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 4.2e-195 684.9 431 81.4
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.2e-195 684.9 428 82.0
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 5.4e-195 684.5 428 79.9
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 5.4e-195 684.5 434 79.5
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 7.1e-195 684.1 428 79.9
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 9.3e-195 683.7 399 84.7
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 1.2e-194 683.3 429 79.7
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 1.6e-194 682.9 428 80.8
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 3.5e-194 681.8 428 79.7
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 3.5e-194 681.8 430 80.0
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.6e-194 681.4 428 81.8
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 4.6e-194 681.4 427 81.5
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 4.6e-194 681.4 436 78.9
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 7.8e-194 680.6 429 79.0
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 1.0e-193 680.2 436 79.4
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 1.7e-193 679.5 428 79.4
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 2.3e-193 679.1 429 78.8
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 3.9e-193 678.3 518 69.9
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 1.1e-192 676.8 429 78.8
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 1.1e-192 676.8 441 79.8
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 1.9e-192 676.0 489 73.4
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 1.9e-192 676.0 556 65.5
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 2.5e-192 675.6 393 84.7
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 3.3e-192 675.2 434 78.8
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 7.3e-192 674.1 429 78.8
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 1.6e-191 672.9 429 78.3
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 2.8e-191 672.2 458 75.8
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 4.8e-191 671.4 438 78.3
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 1.1e-190 670.2 432 80.1
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 1.8e-190 669.5 436 78.0
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 3.1e-190 668.7 435 78.2
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 4.0e-190 668.3 441 76.6
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 6.9e-190 667.5 438 76.3
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 9.0e-190 667.2 436 78.2
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 2.6e-189 665.6 426 78.9
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 2.9e-188 662.1 431 76.6
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 4.2e-187 658.3 467 74.7
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.2e-187 658.3 438 74.9
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.1e-185 651.4 428 79.4
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 3.1e-182 642.1 426 77.7
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 3.4e-181 638.6 433 76.4
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 4.9e-180 634.8 444 73.9
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 4.9e-180 634.8 428 75.9
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 1.4e-179 633.3 395 79.5
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 7.1e-179 630.9 413 77.2
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 2.7e-178 629.0 442 72.9
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 1.0e-177 627.1 405 77.5
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 1.4e-174 616.7 404 74.5
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 2.0e-173 612.8 418 75.8
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 2.6e-173 612.5 426 75.6
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.7e-172 609.8 442 72.2
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 2.2e-172 609.4 425 73.4
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 3.8e-172 608.6 382 77.5
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 8.2e-167 590.9 342 84.2
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 9.0e-166 587.4 362 80.7
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 2.9e-164 582.4 362 80.7
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 2.5e-163 579.3 346 86.1
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 4.6e-162 575.1 350 83.7
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 1.8e-161 573.2 354 83.1
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 6.9e-158 561.2 338 83.4
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 1.0e-153 547.4 430 67.7
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 9.7e-152 540.8 346 75.4
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 4.5e-149 531.9 437 65.9
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 2.1e-146 523.1 333 77.5
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 3.9e-145 518.8 384 69.5
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 1.7e-143 513.5 347 75.5
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 5.3e-142 508.4 370 69.2
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 6.5e-140 501.5 366 71.0
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 1.2e-130 470.7 261 87.7
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 1.2e-125 454.1 331 67.4
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 1.3e-119 434.1 285 76.8
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 5.4e-118 428.7 269 81.4
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 1.5e-115 420.6 401 57.9
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 2.7e-101 373.2 232 82.3
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.3e-95 354.4 243 72.0
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 3.1e-89 333.2 232 72.4
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 2.2e-87 327.0 188 88.3
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.1e-81 308.1 191 80.6
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 1.4e-81 307.8 355 50.4
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 1.5e-80 304.3 365 46.0
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.6e-69 267.7 155 80.0
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.7e-69 266.9 188 70.7
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.7e-69 266.9 188 70.7
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 4.6e-61 239.6 146 80.8
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 1.3e-60 238.0 220 63.2
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 9.0e-57 225.3 244 55.7
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 3.7e-42 176.8 157 59.9
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 2.6e-40 170.6 99 84.8
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.1e-36 156.4 295 40.0
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 4.8e-34 149.8 220 49.1
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 6.3e-26 122.9 84 75.0
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 6.5e-23 112.8 60 93.3
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 8.8e-20 102.4 89 64.0
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 7.5e-19 99.4 79 67.1
QL07p006183 Quercus lobata HOM05D003701 ORTHO05D030296 2.8e-18 97.4 59 83.1
QL09p045974 Quercus lobata HOM05D003701 ORTHO05D030296 2.8e-18 97.4 59 83.1
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.6e-16 91.7 90 54.4
Medtr0368s0020 Medicago truncatula HOM05D003701 ORTHO05D026922 1.3e-15 88.6 65 70.8
Glyma.14G185666 Glycine max HOM05D003701 ORTHO05D026922 2.9e-15 87.4 47 93.6
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 2.5e-14 84.3 46 82.6
Actinidia38274 Actinidia chinensis HOM05D003701 ORTHO05D012924 1.7e-10 71.6 44 77.3
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 3.1e-09 67.4 74 50.0
BolC2t09870H Brassica oleracea HOM05D003701 ORTHO05D041413 9.2e-09 65.9 74 51.4
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 9.2e-09 65.9 43 76.7
C05p40290 Brassica napus HOM05D003701 ORTHO05D041413 7.7e-08 62.8 74 50.0
MBI09_g06128_MAGBIO Magnolia biondii HOM05D018637 ORTHO05D012924 1.7e-07 61.6 43 65.1
Rhsim05G0028600 Rhododendron simsii HOM05D000745 ORTHO05D000641 1.9e-06 58.2 28 82.1


User provided reference genes

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