Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1838 Trochodendron aralioides HOM05D005224 ORTHO05D006372 5.6e-34 147.1 79 100.0
TAR365G0183 Trochodendron aralioides HOM05D005224 ORTHO05D006372 8.7e-27 123.2 78 79.5
Dinv29760 Davidia involucrata HOM05D005224 ORTHO05D006372 1.1e-26 122.9 78 75.6
Dinv44366 Davidia involucrata HOM05D005224 ORTHO05D006372 1.1e-26 122.9 78 75.6
ECA246G3542 Erigeron canadensis HOM05D005224 ORTHO05D006372 1.6e-25 119.0 64 87.5
HanXRQChr06g0173941 Helianthus annuus HOM05D005224 ORTHO05D006372 1.6e-25 119.0 64 87.5
HanXRQChr17g0538761 Helianthus annuus HOM05D005224 ORTHO05D006372 1.6e-25 119.0 64 87.5
Hma1.2p1_1185F.1_g264980 Hydrangea macrophylla HOM05D005224 ORTHO05D006372 1.6e-25 119.0 64 84.4
Lsat_1_v5_gn_3_24761 Lactuca sativa HOM05D005224 ORTHO05D006372 1.6e-25 119.0 64 87.5
Nn4g25791 Nelumbo nucifera HOM05D005224 ORTHO05D006372 2.1e-25 118.6 78 73.1
GSVIVG01035146001 Vitis vinifera HOM05D005224 ORTHO05D006372 3.6e-25 117.9 64 85.9
MBI18_g06871_MAGBIO Magnolia biondii HOM05D005224 ORTHO05D006372 4.7e-25 117.5 63 87.3
Aqoxy2G02950 Aquilegia oxysepala HOM05D005224 ORTHO05D006372 6.2e-25 117.1 64 84.4
Eucgr.K03475 Eucalyptus grandis HOM05D005224 ORTHO05D006372 6.2e-25 117.1 63 85.7
Hund11874 Selenicereus undatus HOM05D005224 ORTHO05D006372 6.2e-25 117.1 76 75.0
Cc04_g11150 Coffea canephora HOM05D005224 ORTHO05D006372 8.1e-25 116.7 63 85.7
Actinidia24346 Actinidia chinensis HOM05D001413 ORTHO05D001385 1.1e-24 116.3 64 82.8
DCAR_027069 Daucus carota HOM05D005224 ORTHO05D006372 1.1e-24 116.3 64 84.4
ECA240G1836 Erigeron canadensis HOM05D002891 ORTHO05D003369 1.1e-24 116.3 63 87.3
PGR042G0105 Punica granatum HOM05D005224 ORTHO05D006372 1.1e-24 116.3 64 84.4
Ah.02g128370 Amaranthus hybridus HOM05D005224 ORTHO05D006372 1.4e-24 115.9 76 73.7
Ciclev10033216m.g Citrus clementina HOM05D005224 ORTHO05D006372 1.4e-24 115.9 64 84.4
PSO210G2815 Papaver somniferum HOM05D005224 ORTHO05D006372 1.4e-24 115.9 64 82.8
PSO832G3231 Papaver somniferum HOM05D005224 ORTHO05D006372 1.4e-24 115.9 64 82.8
Phvul.001G207200 Phaseolus vulgaris HOM05D005224 ORTHO05D006372 1.8e-24 115.5 63 85.7
Thecc.01G299700 Theobroma cacao HOM05D005224 ORTHO05D006372 1.8e-24 115.5 63 84.1
TWI14G1007 Tripterygium wilfordii HOM05D005224 ORTHO05D006372 1.8e-24 115.5 63 84.1
ATR0796G245 Amborella trichopoda HOM05D005224 ORTHO05D006372 2.4e-24 115.2 64 84.4
PSO210G7006 Papaver somniferum HOM05D005224 ORTHO05D006372 2.4e-24 115.2 76 69.7
HPP92_017223 Vanilla planifolia HOM05D005224 ORTHO05D006372 2.4e-24 115.2 76 71.1
TWI23G0618 Tripterygium wilfordii HOM05D005224 ORTHO05D006372 3.1e-24 114.8 63 82.5
vmacro03691 Vaccinium macrocarpon HOM05D005224 ORTHO05D006372 3.1e-24 114.8 63 84.1
CANSAT25G2283 Cannabis sativa HOM05D005224 ORTHO05D006372 4.0e-24 114.4 63 84.1
unitig_0.g663 Utricularia gibba HOM05D005224 ORTHO05D006372 4.0e-24 114.4 64 79.7
EL10Ac3g05917 Beta vulgaris HOM05D005224 ORTHO05D006372 5.2e-24 114.0 64 81.2
Cfa005919 Carpinus fangiana HOM05D005224 ORTHO05D006372 5.2e-24 114.0 76 69.7
CDE09G0321 Ceratophyllum demersum HOM05D005224 ORTHO05D006372 5.2e-24 114.0 63 84.1
Haze_04931 Corylus avellana HOM05D005224 ORTHO05D006372 5.2e-24 114.0 76 69.7
Gohir.D08G085200 Gossypium hirsutum HOM05D005224 ORTHO05D006372 5.2e-24 114.0 63 84.1
Manes.01G218400 Manihot esculenta HOM05D005224 ORTHO05D006372 5.2e-24 114.0 63 84.1
Manes.05G062300 Manihot esculenta HOM05D005224 ORTHO05D006372 5.2e-24 114.0 63 84.1
Potri.014G129600 Populus trichocarpa HOM05D005224 ORTHO05D006372 5.2e-24 114.0 64 81.2
Duzib133G0273 Durio zibethinus HOM05D005224 ORTHO05D006372 6.9e-24 113.6 63 82.5
Glyma.03G214500 Glycine max HOM05D005224 ORTHO05D006372 6.9e-24 113.6 63 82.5
Glyma.19G211200 Glycine max HOM05D005224 ORTHO05D006372 6.9e-24 113.6 63 82.5
PSO170G2085 Papaver somniferum HOM05D005224 ORTHO05D006372 6.9e-24 113.6 76 68.4
Gohir.A12G130700 Gossypium hirsutum HOM05D005224 ORTHO05D006372 9.0e-24 113.2 63 82.5
Gohir.D12G134600 Gossypium hirsutum HOM05D005224 ORTHO05D006372 9.0e-24 113.2 63 82.5
Gorai.008G145500 Gossypium raimondii HOM05D005224 ORTHO05D006372 9.0e-24 113.2 63 82.5
Lalb_Chr04g0259841 Lupinus albus HOM05D005224 ORTHO05D006372 9.0e-24 113.2 63 82.5
MD03G1287600 Malus domestica HOM05D005224 ORTHO05D006372 9.0e-24 113.2 62 83.9
CSS0034435 Camellia sinensis var. sinensis HOM05D005224 ORTHO05D006372 1.2e-23 112.8 63 81.0
CDE02G3260 Ceratophyllum demersum HOM05D005224 ORTHO05D006372 1.2e-23 112.8 63 82.5
FvH4_2g25680 Fragaria vesca HOM05D005224 ORTHO05D006372 1.2e-23 112.8 62 83.9
FAN15G2088 Fragaria x ananassa HOM05D005224 ORTHO05D006372 1.2e-23 112.8 62 83.9
FAN20G0551 Fragaria x ananassa HOM05D005224 ORTHO05D006372 1.2e-23 112.8 62 83.9
FAN27G2170 Fragaria x ananassa HOM05D005224 ORTHO05D006372 1.2e-23 112.8 62 83.9
BolC6t38010H Brassica oleracea HOM05D005224 ORTHO05D006372 1.5e-23 112.5 63 82.5
Migut.D00213 Erythranthe guttata HOM05D005224 ORTHO05D006372 1.5e-23 112.5 64 79.7
Potri.002G204800 Populus trichocarpa HOM05D005224 ORTHO05D006372 1.5e-23 112.5 64 79.7
Zm00001eb039670 Zea mays HOM05D005224 ORTHO05D006372 1.5e-23 112.5 64 81.2
arahy.Tifrunner.gnm1.ann1.8KN71Z Arachis hypogaea HOM05D005224 ORTHO05D006372 2.0e-23 112.1 63 82.5
arahy.Tifrunner.gnm1.ann1.EEQ3S4 Arachis hypogaea HOM05D005224 ORTHO05D006372 2.0e-23 112.1 63 82.5
arahy.Tifrunner.gnm1.ann1.U5VDRT Arachis hypogaea HOM05D005224 ORTHO05D006372 2.0e-23 112.1 63 82.5
ClCG10G010880 Citrullus lanatus HOM05D005224 ORTHO05D006372 2.0e-23 112.1 64 79.7
Gohir.A08G075800 Gossypium hirsutum HOM05D005224 ORTHO05D006372 2.0e-23 112.1 63 82.5
Gorai.004G089700 Gossypium raimondii HOM05D005224 ORTHO05D006372 2.0e-23 112.1 63 82.5
Prupe.8G260800 Prunus persica HOM05D005224 ORTHO05D006372 2.0e-23 112.1 62 82.3
RcHm_v2.0_Chr6g0293941 Rosa chinensis HOM05D005224 ORTHO05D006372 2.0e-23 112.1 62 82.3
Sed0018249 Sechium edule HOM05D005224 ORTHO05D006372 2.0e-23 112.1 64 79.7
Sed0019318 Sechium edule HOM05D005224 ORTHO05D006372 2.0e-23 112.1 64 79.7
AL4G47260 Arabidopsis lyrata HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
AL5G45570 Arabidopsis lyrata HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
AT2G47690 Arabidopsis thaliana HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
AT3G62790 Arabidopsis thaliana HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
BcaB02g08753 Brassica carinata HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
BcaC02g12549 Brassica carinata HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
BcaC07g40762 Brassica carinata HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
BcaC07g42731 Brassica carinata HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
BcaNung06420 Brassica carinata HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
A07p26090 Brassica napus HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
A09p54640 Brassica napus HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
C04p00180 Brassica napus HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
C08p37540 Brassica napus HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
BolC4t21665H Brassica oleracea HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
BraA05t19024Z Brassica rapa HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
BraA09t40875Z Brassica rapa HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
Carub.0004s3041 Capsella rubella HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
Carub.0005s2944 Capsella rubella HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
CARHR143080 Cardamine hirsuta HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
CARHR173060 Cardamine hirsuta HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
Cpa.g.sc19.280 Carica papaya HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
Thhalv10001702m.g Eutrema salsugineum HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
Thhalv10006347m.g Eutrema salsugineum HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
Lalb_Chr15g0078521 Lupinus albus HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
Nitab4.5_0011375g0020 Nicotiana tabacum HOM05D005224 ORTHO05D006372 2.6e-23 111.7 61 83.6
Sp4g29630 Schrenkiella parvula HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
Sp5g00730 Schrenkiella parvula HOM05D005224 ORTHO05D006372 2.6e-23 111.7 63 81.0
Gohir.A08G042400 Gossypium hirsutum HOM05D005224 ORTHO05D006372 3.4e-23 111.3 63 81.0
Gohir.D08G052200 Gossypium hirsutum HOM05D005224 ORTHO05D006372 3.4e-23 111.3 63 81.0
Gorai.004G052300 Gossypium raimondii HOM05D005224 ORTHO05D006372 3.4e-23 111.3 63 81.0
Lj1g0012977 Lotus japonicus HOM05D005224 ORTHO05D006372 3.4e-23 111.3 63 81.0
Duzib211G0376 Durio zibethinus HOM05D005224 ORTHO05D006372 4.4e-23 110.9 63 81.0
Psat3g022120 Pisum sativum HOM05D005224 ORTHO05D006372 4.4e-23 110.9 63 81.0
QL12p028550 Quercus lobata HOM05D005224 ORTHO05D006372 4.4e-23 110.9 75 68.0
A05p00270 Brassica napus HOM05D005224 ORTHO05D006372 5.8e-23 110.5 63 79.4
THA.LOC104817499 Tarenaya hassleriana HOM05D005224 ORTHO05D006372 5.8e-23 110.5 63 79.4
Actinidia32220 Actinidia chinensis HOM05D005224 ORTHO05D006372 7.6e-23 110.2 75 68.0
Aa31LG1G29010 Aethionema arabicum HOM05D005224 ORTHO05D006372 7.6e-23 110.2 63 79.4
BcaB02g07318 Brassica carinata HOM05D005224 ORTHO05D006372 7.6e-23 110.2 63 79.4
C06p28410 Brassica napus HOM05D005224 ORTHO05D006372 9.9e-23 109.8 63 81.0
Medtr7g108810 Medicago truncatula HOM05D001413 ORTHO05D001385 9.9e-23 109.8 63 79.4
TPR.G9599 Trifolium pratense HOM05D005224 ORTHO05D006372 9.9e-23 109.8 63 79.4
CsaV3_4G000760 Cucumis sativus L. HOM05D005224 ORTHO05D006372 1.3e-22 109.4 64 76.6
Migut.D02475 Erythranthe guttata HOM05D005224 ORTHO05D006372 1.3e-22 109.4 64 76.6
TAR370G0003 Trochodendron aralioides HOM05D005224 ORTHO05D006372 1.3e-22 109.4 78 78.2
MELO3C017960.2 Cucumis melo HOM05D005224 ORTHO05D006372 1.7e-22 109.0 64 76.6
Os08g0556600 Oryza sativa ssp. japonica HOM05D005224 ORTHO05D006372 3.8e-22 107.8 63 77.8
Peaxi162Scf00589g00224 Petunia axillaris HOM05D005224 ORTHO05D006372 3.8e-22 107.8 57 86.0
CiPaw.07G108200 Carya illinoinensis HOM05D005224 ORTHO05D006372 4.9e-22 107.5 76 65.8
Sc25g0004000 Simmondsia chinensis HOM05D005224 ORTHO05D006372 2.4e-21 105.1 84 64.3
PGSC0003DMG400028681 Solanum tuberosum HOM05D005224 ORTHO05D006372 4.2e-21 104.4 53 88.7
Nitab4.5_0000805g0100 Nicotiana tabacum HOM05D005224 ORTHO05D006372 5.4e-21 104.0 53 88.7
Solyc11g005880.2 Solanum lycopersicum HOM05D005224 ORTHO05D006372 5.4e-21 104.0 54 87.0
Sopen11g001830 Solanum pennellii HOM05D005224 ORTHO05D006372 5.4e-21 104.0 54 87.0
COL.COLO4_23352 Corchorus olitorius HOM05D005224 ORTHO05D006372 1.2e-20 102.8 84 63.1
SHI19781 Sapria himalayana HOM05D005224 ORTHO05D006372 1.2e-20 102.8 64 73.4
CAN.G652.1 Capsicum annuum HOM05D005224 ORTHO05D006372 4.6e-20 100.9 52 86.5
SalBow3G4056 Salvia bowleyana HOM05D005224 ORTHO05D006372 6.0e-20 100.5 89 58.4
BcaC08g45239 Brassica carinata HOM05D005224 ORTHO05D006372 9.6e-18 93.2 49 83.7
Oeu054123.1 Olea europaea HOM05D005224 ORTHO05D006372 7.6e-15 83.6 42 85.7
BraA07t30257Z Brassica rapa HOM05D005224 ORTHO05D006372 9.9e-15 83.2 42 85.7
HanXRQChr08g0223921 Helianthus annuus HOM05D005224 ORTHO05D006372 1.7e-14 82.4 42 85.7
HanXRQChr09g0263651 Helianthus annuus HOM05D005224 ORTHO05D006372 2.9e-14 81.6 42 85.7
CiPaw.08G095500 Carya illinoinensis HOM05D005224 ORTHO05D006372 3.8e-14 81.3 60 65.0
MD02G1095800 Malus domestica HOM05D005224 ORTHO05D006372 3.8e-14 81.3 41 82.9
CBR_g52287 Chara braunii HOM05D005224 ORTHO05D006372 1.2e-12 76.3 62 56.5
Mapoly0155s0025 Marchantia polymorpha HOM05D005224 ORTHO05D006372 1.2e-12 76.3 56 66.1
AagrBONN_evm.TU.Sc2ySwM_344.1353 Anthoceros agrestis HOM05D005224 ORTHO05D006372 1.6e-12 75.9 76 52.6
Pp3c11_13470 Physcomitrium patens HOM05D005224 ORTHO05D006372 8.7e-11 70.1 56 58.9
Pp3c7_20680 Physcomitrium patens HOM05D005224 ORTHO05D006372 8.7e-11 70.1 56 58.9


User provided reference genes

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