Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 5.0e-257 890.6 444 100.0
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 1.4e-190 669.8 444 73.6
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 1.1e-187 660.2 432 74.8
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 3.4e-181 638.6 443 71.1
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 8.5e-180 634.0 447 70.0
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 4.8e-175 618.2 434 70.3
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 6.3e-175 617.8 434 70.3
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 1.4e-171 606.7 454 67.8
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 7.4e-168 594.3 442 68.1
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 2.8e-167 592.4 444 65.3
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 1.8e-166 589.7 441 66.2
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 2.4e-166 589.3 444 64.9
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 5.3e-166 588.2 442 67.6
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 2.6e-165 585.9 449 65.3
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 5.9e-165 584.7 441 66.2
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 2.5e-163 579.3 431 65.9
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 8.0e-162 574.3 446 63.7
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 4.4e-160 568.5 444 64.0
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 5.7e-160 568.2 451 64.3
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 1.8e-158 563.1 426 64.3
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 3.5e-157 558.9 461 61.6
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 6.5e-156 554.7 444 62.8
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 5.5e-155 551.6 442 60.4
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 9.4e-155 550.8 461 63.3
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 4.7e-154 548.5 442 60.2
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 6.1e-154 548.1 426 63.8
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 1.4e-153 547.0 428 63.6
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 4.0e-153 545.4 437 60.9
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 5.7e-152 541.6 438 60.0
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 1.4e-150 537.0 442 60.9
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 4.1e-150 535.4 429 62.0
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.3e-148 530.4 433 61.0
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 6.6e-148 528.1 429 61.5
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 1.1e-147 527.3 438 59.6
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 1.0e-145 520.8 444 59.9
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 2.3e-145 519.6 429 59.2
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 3.0e-145 519.2 429 59.9
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 5.2e-145 518.5 434 59.4
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 6.8e-145 518.1 429 62.7
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 5.7e-144 515.0 445 59.6
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 1.3e-143 513.8 444 59.0
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 1.3e-143 513.8 438 57.8
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.7e-143 513.5 445 58.9
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 2.2e-143 513.1 438 58.4
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 2.2e-143 513.1 434 57.8
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.9e-143 511.9 438 59.4
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.9e-143 511.9 438 59.4
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.8e-142 510.0 429 59.2
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 2.4e-142 509.6 450 59.8
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 7.0e-142 508.1 428 58.9
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 9.2e-142 507.7 444 59.0
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 2.0e-141 506.5 443 57.8
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 2.7e-141 506.1 506 52.8
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 7.8e-141 504.6 313 75.7
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 2.9e-140 502.7 426 58.7
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 2.9e-140 502.7 484 56.6
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 8.6e-140 501.1 439 57.4
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 9.5e-139 497.7 431 57.8
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 2.8e-138 496.1 438 58.2
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 6.1e-138 495.0 418 58.6
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 1.8e-137 493.4 427 56.7
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 1.8e-137 493.4 439 57.9
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 2.3e-137 493.0 432 56.2
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 1.7e-135 486.9 439 56.9
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 2.9e-135 486.1 444 57.0
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 4.9e-135 485.3 419 57.5
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 4.9e-135 485.3 432 54.2
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 6.4e-135 485.0 444 56.5
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 1.2e-133 480.7 430 56.0
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 2.7e-133 479.6 305 74.1
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 1.0e-132 477.6 430 55.6
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 1.0e-132 477.6 431 57.8
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 3.0e-132 476.1 433 54.7
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 3.0e-132 476.1 427 55.5
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 3.9e-132 475.7 454 55.7
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 6.6e-132 474.9 415 57.1
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 2.5e-131 473.0 427 54.1
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 2.5e-131 473.0 427 54.3
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 1.6e-130 470.3 438 55.7
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 4.7e-130 468.8 374 60.2
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 1.4e-129 467.2 436 55.7
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 3.1e-129 466.1 429 55.0
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 5.2e-129 465.3 427 53.9
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 8.9e-129 464.5 429 53.8
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 4.4e-128 462.2 439 56.0
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 7.5e-128 461.5 421 58.9
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 3.2e-126 456.1 419 55.8
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 7.0e-126 454.9 437 52.6
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 2.7e-125 453.0 449 53.9
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 6.0e-125 451.8 432 52.3
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 6.2e-122 441.8 441 54.0
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 4.4e-120 435.6 437 54.5
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 1.3e-119 434.1 381 57.2
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 2.2e-119 433.3 421 53.4
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 8.6e-116 421.4 420 52.1
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 4.0e-105 386.0 343 57.7
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 6.9e-105 385.2 448 48.0
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 1.2e-104 384.4 440 48.0
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 6.4e-103 378.6 424 46.2
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 5.6e-91 339.0 323 54.5
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 2.4e-89 333.6 430 43.7
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 7.7e-72 275.4 282 51.1
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 1.4e-62 244.6 390 40.0
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 7.2e-62 242.3 172 65.1
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 1.4e-60 238.0 375 37.9
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 5.1e-60 236.1 155 71.6
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 1.5e-59 234.6 259 47.5
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 6.3e-58 229.2 148 72.3
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 1.8e-57 227.6 364 36.8
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 5.9e-56 222.6 224 55.8
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 1.0e-55 221.9 341 36.7
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 8.5e-55 218.8 432 34.7
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 2.8e-50 203.8 326 36.8
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 3.8e-47 193.4 142 61.3
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 5.2e-44 183.0 148 62.2
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.7e-42 177.9 159 57.2
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 3.0e-36 157.1 162 48.1
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 3.4e-35 153.7 321 31.8
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 2.8e-21 107.5 270 24.8
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 5.4e-17 93.2 109 45.9
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 1.2e-16 92.0 65 63.1
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 2.0e-16 91.3 65 63.1
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 5.8e-11 73.2 183 26.8
Nitab4.5_0001379g0140 Nicotiana tabacum HOM05D006228 ORTHO05D007847 5.1e-07 60.1 29 89.7


User provided reference genes

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