Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1809 Trochodendron aralioides HOM05D005258 ORTHO05D006525 5.3e-165 584.3 304 100.0
Dinv09684 Davidia involucrata HOM05D005258 ORTHO05D006525 5.9e-124 448.0 274 80.3
Dinv12244 Davidia involucrata HOM05D005258 ORTHO05D006525 5.9e-124 448.0 274 80.3
TAR624G0064 Trochodendron aralioides HOM05D005258 ORTHO05D006525 1.7e-123 446.4 281 82.6
Actinidia01232 Actinidia chinensis HOM05D005258 ORTHO05D006525 5.0e-123 444.9 280 79.3
GSVIVG01024619001 Vitis vinifera HOM05D005258 ORTHO05D006525 1.4e-120 436.8 282 78.0
CSS0008764 Camellia sinensis var. sinensis HOM05D005258 ORTHO05D006525 9.7e-119 430.6 274 77.7
CSS0033097 Camellia sinensis var. sinensis HOM05D005258 ORTHO05D006525 1.8e-117 426.4 274 77.4
Rhsim11G0040500 Rhododendron simsii HOM05D005258 ORTHO05D006525 3.4e-111 405.6 282 72.7
Gohir.A08G203600 Gossypium hirsutum HOM05D005258 ORTHO05D006525 4.4e-111 405.2 272 75.4
Lj2C1095G3 Lonicera japonica HOM05D005258 ORTHO05D006525 3.7e-110 402.1 296 70.3
Gohir.D08G220900 Gossypium hirsutum HOM05D005258 ORTHO05D006525 8.3e-110 401.0 276 72.8
Manes.18G136600 Manihot esculenta HOM05D005258 ORTHO05D006525 2.4e-109 399.4 296 68.2
Duzib168G0041 Durio zibethinus HOM05D005258 ORTHO05D006525 4.1e-109 398.7 276 72.5
Thecc.09G359400 Theobroma cacao HOM05D005258 ORTHO05D006525 4.1e-109 398.7 276 72.1
CiPaw.14G053300 Carya illinoinensis HOM05D005258 ORTHO05D006525 1.3e-107 393.7 283 69.6
Sc21g0004960 Simmondsia chinensis HOM05D005258 ORTHO05D006525 2.9e-107 392.5 301 66.4
CDE06G2080 Ceratophyllum demersum HOM05D005258 ORTHO05D006525 1.5e-106 390.2 249 78.7
QL04p095946 Quercus lobata HOM05D005258 ORTHO05D006525 1.5e-106 390.2 273 70.7
vmacro00112 Vaccinium macrocarpon HOM05D005258 ORTHO05D006525 1.9e-106 389.8 290 70.7
MELO3C020493.2 Cucumis melo HOM05D005258 ORTHO05D006525 4.2e-106 388.7 274 73.0
Gorai.004G234600 Gossypium raimondii HOM05D005258 ORTHO05D006525 4.2e-106 388.7 272 72.4
Prupe.6G046100 Prunus persica HOM05D005258 ORTHO05D006525 9.5e-106 387.5 273 71.8
TWI75G0534 Tripterygium wilfordii HOM05D005258 ORTHO05D006525 9.5e-106 387.5 277 70.8
CANSAT54G1230 Cannabis sativa HOM05D005258 ORTHO05D006525 2.8e-105 386.0 301 66.4
DCAR_028395 Daucus carota HOM05D005258 ORTHO05D006525 4.7e-105 385.2 284 70.1
Eucgr.B04012 Eucalyptus grandis HOM05D005258 ORTHO05D006525 1.4e-104 383.6 261 72.4
FvH4_3g39930 Fragaria vesca HOM05D005258 ORTHO05D006525 1.8e-104 383.3 286 68.9
MD03G1058000 Malus domestica HOM05D005258 ORTHO05D006525 1.8e-104 383.3 284 68.7
Lj2g0020421 Lotus japonicus HOM05D005258 ORTHO05D006525 2.3e-104 382.9 281 68.7
Sed0015134 Sechium edule HOM05D005258 ORTHO05D006525 5.2e-104 381.7 272 72.1
Sabra13G0123700 Salix brachista HOM05D005258 ORTHO05D006525 6.8e-104 381.3 281 67.3
Nitab4.5_0015019g0010 Nicotiana tabacum HOM05D005258 ORTHO05D006525 1.2e-103 380.6 278 68.7
PSO384G2283 Papaver somniferum HOM05D005258 ORTHO05D006525 1.2e-103 380.6 284 67.6
Psat5g152360 Pisum sativum HOM05D005258 ORTHO05D006525 1.2e-103 380.6 262 71.4
Cpa.g.sc53.44 Carica papaya HOM05D005258 ORTHO05D006525 2.0e-103 379.8 293 65.9
CsaV3_6G022490 Cucumis sativus L. HOM05D005258 ORTHO05D006525 4.4e-103 378.6 274 71.2
Lj6g0021320 Lotus japonicus HOM05D005258 ORTHO05D006525 4.4e-103 378.6 281 67.6
MBI18_g09779_MAGBIO Magnolia biondii HOM05D005258 ORTHO05D006525 5.7e-103 378.3 277 70.8
PSO339G6698 Papaver somniferum HOM05D005258 ORTHO05D006525 5.7e-103 378.3 276 68.1
MD11G1060300 Malus domestica HOM05D005258 ORTHO05D006525 9.8e-103 377.5 284 67.6
Medtr3g031280 Medicago truncatula HOM05D005258 ORTHO05D006525 1.3e-102 377.1 262 70.6
Potri.013G153900 Populus trichocarpa HOM05D005258 ORTHO05D006525 1.3e-102 377.1 281 66.5
PGR102G1249 Punica granatum HOM05D005258 ORTHO05D006525 1.3e-102 377.1 274 70.4
CsaV3_1G036740 Cucumis sativus L. HOM05D005258 ORTHO05D006525 2.2e-102 376.3 274 70.8
Haze_24429 Corylus avellana HOM05D005258 ORTHO05D006525 3.7e-102 375.6 290 66.9
HanXRQChr08g0228541 Helianthus annuus HOM05D005258 ORTHO05D006525 4.9e-102 375.2 283 68.6
Solyc06g082370.4 Solanum lycopersicum HOM05D005258 ORTHO05D006525 4.9e-102 375.2 304 64.8
Ca_15017_v3 Cicer arietinum L. HOM05D005258 ORTHO05D006525 6.3e-102 374.8 301 63.8
Aqoxy2G00760 Aquilegia oxysepala HOM05D005258 ORTHO05D006525 8.3e-102 374.4 280 67.1
PGSC0003DMG400030379 Solanum tuberosum HOM05D005258 ORTHO05D006525 8.3e-102 374.4 304 64.8
ClCG03G000160 Citrullus lanatus HOM05D005258 ORTHO05D006525 2.4e-101 372.9 285 68.4
Glyma.11G163000 Glycine max HOM05D005258 ORTHO05D006525 5.4e-101 371.7 262 67.9
Phvul.006G074900 Phaseolus vulgaris HOM05D005258 ORTHO05D006525 5.4e-101 371.7 264 68.9
Sopen06g033760 Solanum pennellii HOM05D005258 ORTHO05D006525 7.0e-101 371.3 278 67.6
THA.LOC104812325 Tarenaya hassleriana HOM05D005258 ORTHO05D006525 2.7e-100 369.4 261 68.6
Glyma.18G056300 Glycine max HOM05D005258 ORTHO05D006525 7.8e-100 367.9 264 67.0
Hund19201 Selenicereus undatus HOM05D005258 ORTHO05D006525 1.7e-99 366.7 254 71.7
Lalb_Chr18g0051461 Lupinus albus HOM05D005258 ORTHO05D006525 2.3e-99 366.3 274 67.9
FAN11G2675 Fragaria x ananassa HOM05D005258 ORTHO05D006525 1.5e-98 363.6 286 66.8
ATR0681G175 Amborella trichopoda HOM05D005258 ORTHO05D006525 1.9e-98 363.2 248 73.8
THA.LOC104813633 Tarenaya hassleriana HOM05D005258 ORTHO05D006525 1.9e-98 363.2 259 69.1
Lsat_1_v5_gn_9_14481 Lactuca sativa HOM05D005258 ORTHO05D006525 5.6e-98 361.7 300 65.3
arahy.Tifrunner.gnm1.ann1.R5QLIS Arachis hypogaea HOM05D005258 ORTHO05D006525 1.2e-97 360.5 262 68.7
Ciclev10001075m.g Citrus clementina HOM05D005258 ORTHO05D006525 2.1e-97 359.8 271 66.4
Nn6g33319 Nelumbo nucifera HOM05D005258 ORTHO05D006525 2.1e-97 359.8 213 82.6
Atru.chr1.2577 Acer truncatum HOM05D005258 ORTHO05D006525 3.6e-97 359.0 287 64.8
arahy.Tifrunner.gnm1.ann1.0U7N6T Arachis hypogaea HOM05D005258 ORTHO05D006525 4.7e-97 358.6 283 64.0
Nitab4.5_0002768g0050 Nicotiana tabacum HOM05D005258 ORTHO05D006525 6.4e-94 348.2 278 65.1
ECA247G3025 Erigeron canadensis HOM05D005258 ORTHO05D006525 3.2e-93 345.9 280 63.9
Cc01_g14990 Coffea canephora HOM05D005258 ORTHO05D006525 1.6e-92 343.6 261 65.5
CARHR017340 Cardamine hirsuta HOM05D005258 ORTHO05D006525 2.7e-92 342.8 262 65.6
HPP92_026488 Vanilla planifolia HOM05D005258 ORTHO05D006525 7.8e-92 341.3 248 69.8
Carub.0001s1661 Capsella rubella HOM05D005258 ORTHO05D006525 1.1e-90 337.4 262 64.9
BcaB02g06669 Brassica carinata HOM05D005258 ORTHO05D006525 1.5e-90 337.0 262 64.1
Sp1g15010 Schrenkiella parvula HOM05D005258 ORTHO05D006525 1.9e-90 336.7 262 63.4
Os07g0202900 Oryza sativa ssp. japonica HOM05D005258 ORTHO05D006525 2.5e-90 336.3 248 65.3
AT1G16870 Arabidopsis thaliana HOM05D005258 ORTHO05D006525 5.6e-90 335.1 262 64.5
Zm00001eb116240 Zea mays HOM05D005258 ORTHO05D006525 9.5e-90 334.3 248 66.1
AL1G29040 Arabidopsis lyrata HOM05D005258 ORTHO05D006525 2.1e-89 333.2 259 64.5
MSTRG.21245 Avicennia marina HOM05D005258 ORTHO05D006525 2.8e-89 332.8 262 66.8
A06p12780 Brassica napus HOM05D005258 ORTHO05D006525 2.8e-89 332.8 263 63.9
TPR.G25689 Trifolium pratense HOM05D005258 ORTHO05D006525 8.0e-89 331.3 212 74.5
BcaC05g25543 Brassica carinata HOM05D005258 ORTHO05D006525 2.3e-88 329.7 262 63.7
Migut.D00841 Erythranthe guttata HOM05D005258 ORTHO05D006525 2.3e-88 329.7 277 64.3
Thhalv10007506m.g Eutrema salsugineum HOM05D005258 ORTHO05D006525 4.0e-88 328.9 262 63.0
Peaxi162Scf00390g00538 Petunia axillaris HOM05D005258 ORTHO05D006525 1.2e-87 327.4 270 64.1
Lj2g0010469 Lotus japonicus HOM05D005258 ORTHO05D006525 5.8e-87 325.1 219 71.7
C05p15090 Brassica napus HOM05D005258 ORTHO05D006525 1.7e-86 323.6 274 61.3
FAN25G3091 Fragaria x ananassa HOM05D005258 ORTHO05D006525 2.1e-81 306.6 248 63.7
Cfa011791 Carpinus fangiana HOM05D005258 ORTHO05D006525 6.2e-81 305.1 275 61.8
QL01p025810 Quercus lobata HOM05D005258 ORTHO05D006525 6.2e-81 305.1 276 59.8
EL10Ac7g15872 Beta vulgaris HOM05D005258 ORTHO05D006525 5.2e-80 302.0 278 58.6
SalBow6G5766 Salvia bowleyana HOM05D005258 ORTHO05D006525 5.2e-80 302.0 281 57.7
SGA_v2.0_scaffold80G25693 Striga asiatica HOM05D005258 ORTHO05D006525 5.2e-80 302.0 326 53.7
Ah.08g215410 Amaranthus hybridus HOM05D005258 ORTHO05D006525 8.9e-80 301.2 276 58.7
SalBow6G5836 Salvia bowleyana HOM05D005258 ORTHO05D006525 2.2e-78 296.6 281 57.3
HPP92_014227 Vanilla planifolia HOM05D005258 ORTHO05D006525 3.2e-77 292.7 198 74.2
TAR628G0009 Trochodendron aralioides HOM05D005258 ORTHO05D006525 2.3e-75 286.6 160 89.4
CiPaw.13G067700 Carya illinoinensis HOM05D005258 ORTHO05D006525 5.6e-74 282.0 254 59.8
SEGI_17098 Sequoiadendron giganteum HOM05D005258 ORTHO05D006525 1.4e-72 277.3 238 58.0
Nitab4.5_0002494g0040 Nicotiana tabacum HOM05D005258 ORTHO05D006525 1.2e-71 274.2 278 54.3
CAN.G1095.26 Capsicum annuum HOM05D005258 ORTHO05D000750 3.5e-68 262.7 234 59.0
Aa31LG7G1300 Aethionema arabicum HOM05D005258 ORTHO05D006525 2.3e-67 260.0 262 55.3
RcHm_v2.0_Chr5g0071911 Rosa chinensis HOM05D005258 ORTHO05D006525 1.1e-66 257.7 197 64.0
AUR62036231 Chenopodium quinoa HOM05D005258 ORTHO05D006525 1.5e-66 257.3 301 50.8
FAN16G1300 Fragaria x ananassa HOM05D005258 ORTHO05D006525 7.3e-66 255.0 198 63.6
VMungo0540G2447 Vigna mungo HOM05D005258 ORTHO05D006525 6.2e-65 251.9 187 65.2
AUR62009714 Chenopodium quinoa HOM05D005258 ORTHO05D006525 2.4e-64 250.0 301 50.2
FAN21G1740 Fragaria x ananassa HOM05D005258 ORTHO05D006525 6.9e-64 248.4 198 62.6
Dinv28705 Davidia involucrata HOM05D005258 ORTHO05D006525 2.6e-63 246.5 159 77.4
unitig_747.g21452 Utricularia gibba HOM05D005258 ORTHO05D006525 7.1e-61 238.4 258 50.8
Rhsim06G0112000 Rhododendron simsii HOM05D005258 ORTHO05D006525 1.8e-56 223.8 275 50.2
Pp3c11_22290 Physcomitrium patens HOM05D005258 ORTHO05D006525 3.4e-55 219.5 240 47.5
BolC5t30224H Brassica oleracea HOM05D005258 ORTHO05D006525 2.9e-54 216.5 176 61.9
Mapoly0019s0020 Marchantia polymorpha HOM05D005258 ORTHO05D006525 4.2e-53 212.6 284 38.7
AagrBONN_evm.TU.Sc2ySwM_117.1403 Anthoceros agrestis HOM05D005258 ORTHO05D006525 1.3e-46 191.0 282 40.1
COL.COLO4_11171 Corchorus olitorius HOM05D005258 ORTHO05D006525 6.5e-46 188.7 300 42.7
SMO353G0383 Selaginella moellendorffii HOM05D005258 ORTHO05D006525 1.0e-38 164.9 158 49.4
MBI11_g20619_MAGBIO Magnolia biondii HOM05D000666 ORTHO05D001431 1.0e-35 154.8 142 62.7
CAN.G403.12 Capsicum annuum HOM05D005258 ORTHO05D006525 3.2e-29 133.3 116 61.2
CBR_g40648 Chara braunii HOM05D005258 ORTHO05D006525 1.4e-27 127.9 177 42.9
VMungo0540G0790 Vigna mungo HOM05D005258 ORTHO05D006525 3.9e-27 126.3 87 72.4
CAN.G1095.27 Capsicum annuum HOM05D005258 ORTHO05D006525 4.8e-25 119.4 95 61.1
Lsat_1_v5_gn_3_46641 Lactuca sativa HOM05D005258 ORTHO05D006525 2.7e-20 103.6 123 47.2
TAR628G1613 Trochodendron aralioides HOM05D005258 ORTHO05D006525 5.1e-19 99.4 198 38.4
RcHm_v2.0_Chr5g0071921 Rosa chinensis HOM05D005258 ORTHO05D006525 1.7e-14 84.3 54 83.3
CAN.G1538.6 Capsicum annuum HOM05D005258 ORTHO05D006525 4.2e-13 79.7 68 63.2
PRCOL_00003540 Prasinoderma coloniale HOM05D005258 ORTHO05D006525 2.1e-12 77.4 255 28.6
Lsat_1_v5_gn_3_46621 Lactuca sativa HOM05D005258 ORTHO05D006525 2.3e-11 73.9 65 60.0
BraA06t24438Z Brassica rapa HOM05D005258 ORTHO05D006525 7.5e-10 68.9 50 74.0
BcaC07g38819 Brassica carinata HOM05D005258 ORTHO05D006525 8.2e-09 65.5 129 33.3
Cre03.g176700 Chlamydomonas reinhardtii HOM05D005258 ORTHO05D006525 8.2e-09 65.5 81 39.5


User provided reference genes

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