Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 1.9e-141 505.8 248 100.0
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 8.0e-95 350.9 236 69.9
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 1.8e-91 339.7 236 65.7
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 1.6e-90 336.7 236 68.6
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 1.1e-88 330.5 236 65.7
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 1.5e-88 330.1 236 66.1
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.9e-88 329.7 236 65.3
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 3.3e-88 328.9 239 64.0
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 5.6e-88 328.2 236 65.3
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 9.5e-88 327.4 236 66.1
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 1.2e-87 327.0 243 64.6
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 3.6e-87 325.5 236 64.4
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 3.6e-87 325.5 236 64.4
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 4.0e-86 322.0 236 63.1
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 5.2e-86 321.6 238 65.1
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 1.2e-85 320.5 239 64.0
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 2.6e-85 319.3 236 62.7
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 4.4e-85 318.5 236 63.1
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 5.8e-85 318.2 236 62.3
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 5.8e-85 318.2 236 63.6
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 5.8e-85 318.2 236 63.1
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.3e-84 317.0 239 61.1
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 3.7e-84 315.5 236 62.3
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 4.9e-84 315.1 236 63.6
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 6.4e-84 314.7 236 61.9
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 8.3e-84 314.3 239 61.1
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 1.1e-83 313.9 236 61.9
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 2.4e-83 312.8 239 62.8
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 5.4e-83 311.6 241 59.8
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 9.2e-83 310.8 239 61.1
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 9.2e-83 310.8 237 61.2
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.0e-82 309.7 241 61.4
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.0e-82 309.7 239 60.3
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 4.6e-82 308.5 235 63.8
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 4.6e-82 308.5 236 60.6
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 7.8e-82 307.8 236 61.9
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.0e-81 307.4 236 62.7
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 1.0e-81 307.4 282 54.6
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 1.7e-81 306.6 237 59.5
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 2.3e-81 306.2 234 62.4
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 3.0e-81 305.8 237 60.3
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 3.9e-81 305.4 236 59.7
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 3.9e-81 305.4 234 62.4
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 5.0e-81 305.1 237 60.3
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 6.6e-81 304.7 239 59.8
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 8.6e-81 304.3 236 59.7
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 1.5e-80 303.5 237 59.9
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 2.5e-80 302.8 236 60.6
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 3.3e-80 302.4 237 60.8
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 5.6e-80 301.6 222 61.3
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 5.6e-80 301.6 234 61.1
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 7.3e-80 301.2 236 59.7
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 9.5e-80 300.8 236 61.9
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 1.6e-79 300.1 239 59.0
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 3.6e-79 298.9 236 59.3
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 3.6e-79 298.9 239 59.8
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 8.0e-79 297.7 237 57.8
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 1.4e-78 297.0 236 59.3
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.8e-78 296.6 236 60.2
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 1.8e-78 296.6 236 58.5
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 4.0e-78 295.4 237 59.5
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 4.0e-78 295.4 237 59.5
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 4.0e-78 295.4 240 58.3
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 5.2e-78 295.0 236 58.5
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 6.8e-78 294.7 237 57.8
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 9.8e-77 290.8 250 58.0
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 1.7e-76 290.0 236 57.6
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 1.1e-75 287.3 236 57.6
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 1.1e-75 287.3 236 57.6
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 1.2e-74 283.9 240 57.1
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 6.0e-74 281.6 271 51.7
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 6.0e-74 281.6 233 55.4
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 7.8e-74 281.2 236 54.7
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.7e-73 280.0 232 57.8
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.3e-73 279.6 232 57.8
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 3.9e-73 278.9 236 54.2
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 8.6e-73 277.7 236 56.4
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 4.3e-72 275.4 236 55.5
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 9.5e-72 274.2 237 57.0
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.2e-71 273.9 236 55.5
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.6e-71 273.5 236 55.5
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 2.8e-71 272.7 236 55.5
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 8.1e-71 271.2 236 55.5
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 1.5e-69 266.9 237 54.4
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 2.7e-66 256.1 180 63.9
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 3.0e-65 252.7 181 62.4
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 2.1e-63 246.5 238 47.9
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 2.1e-63 246.5 237 49.8
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 1.4e-62 243.8 236 53.4
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 3.8e-60 235.7 182 61.0
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 8.4e-60 234.6 182 59.9
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 4.2e-59 232.3 235 50.6
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 9.2e-59 231.1 229 49.8
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 3.0e-57 226.1 182 58.2
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 7.3e-56 221.5 181 56.9
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 9.6e-56 221.1 228 45.6
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 9.6e-56 221.1 183 56.3
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 2.1e-55 219.9 230 45.7
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 4.7e-55 218.8 179 56.4
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 4.7e-55 218.8 182 58.2
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.6e-53 213.0 209 50.7
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 1.0e-49 201.1 148 62.2
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 3.9e-49 199.1 215 43.7
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 8.7e-49 198.0 232 42.2
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 5.6e-48 195.3 178 55.1
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 5.8e-45 185.3 206 43.7
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 2.2e-44 183.3 181 47.0
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 3.3e-40 169.5 182 46.2
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 2.5e-35 153.3 109 58.7
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 5.8e-29 132.1 208 34.1
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 4.2e-27 125.9 236 34.3
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 1.8e-22 110.5 106 53.8
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 4.1e-22 109.4 263 27.8


User provided reference genes

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