Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 3.9e-134 481.5 248 100.0
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 1.7e-89 333.2 252 66.3
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 1.9e-83 313.2 250 61.6
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 9.2e-83 310.8 246 63.0
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.6e-82 310.1 245 61.2
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.0e-82 309.7 240 61.2
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 7.8e-82 307.8 252 59.5
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 2.3e-81 306.2 248 62.9
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 1.5e-80 303.5 245 62.0
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 7.3e-80 301.2 250 60.4
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 2.8e-79 299.3 248 59.7
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 2.8e-79 299.3 246 61.8
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 4.7e-79 298.5 257 60.3
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 4.7e-79 298.5 259 59.8
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 6.2e-79 298.1 253 60.5
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 8.0e-79 297.7 254 59.4
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 8.0e-79 297.7 253 59.7
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 2.3e-78 296.2 249 59.4
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 4.0e-78 295.4 230 62.6
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 4.0e-78 295.4 256 60.2
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 4.0e-78 295.4 246 58.5
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 8.9e-78 294.3 246 58.5
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 1.3e-76 290.4 246 57.3
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.3e-76 290.4 248 58.9
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 4.9e-76 288.5 249 59.4
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 4.9e-76 288.5 248 58.5
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 4.1e-75 285.4 245 60.4
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 5.4e-75 285.0 242 57.9
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 7.0e-75 284.6 251 57.0
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 9.2e-75 284.3 255 56.5
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.2e-74 283.9 307 49.2
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 1.6e-74 283.5 250 56.4
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 6.0e-74 281.6 250 55.2
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 6.0e-74 281.6 250 56.0
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 7.8e-74 281.2 281 51.2
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 7.8e-74 281.2 255 58.0
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 1.0e-73 280.8 253 54.5
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 2.3e-73 279.6 251 57.8
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 2.3e-73 279.6 245 56.7
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 3.9e-73 278.9 244 57.0
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 3.3e-72 275.8 253 53.8
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 4.3e-72 275.4 246 57.3
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 4.3e-72 275.4 246 55.7
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 4.3e-72 275.4 247 56.3
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 5.6e-72 275.0 246 58.1
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 7.3e-72 274.6 245 55.9
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 9.5e-72 274.2 242 56.2
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 1.6e-71 273.5 249 54.6
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 4.7e-71 271.9 244 56.1
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 6.2e-71 271.6 244 56.1
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 6.2e-71 271.6 244 55.7
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 8.1e-71 271.2 247 56.3
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 1.1e-70 270.8 247 57.1
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 2.3e-70 269.6 244 55.7
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 2.3e-70 269.6 241 55.6
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 5.2e-70 268.5 255 55.3
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 6.8e-70 268.1 245 57.1
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 8.9e-70 267.7 250 53.6
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 8.9e-70 267.7 250 52.8
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 1.5e-69 266.9 257 54.1
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 1.5e-69 266.9 250 52.8
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 2.0e-69 266.5 249 56.2
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 2.0e-69 266.5 250 55.6
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 2.6e-69 266.2 248 54.0
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 4.4e-69 265.4 245 54.7
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 5.8e-69 265.0 243 56.0
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 1.3e-68 263.8 245 53.5
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 2.2e-68 263.1 244 55.3
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 3.7e-68 262.3 242 54.1
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 1.4e-67 260.4 244 54.1
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 1.9e-67 260.0 243 54.3
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 5.4e-67 258.5 264 52.3
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 7.1e-67 258.1 160 73.8
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 1.6e-66 256.9 248 54.4
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.5e-64 250.4 261 48.7
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 1.5e-64 250.4 247 54.3
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 3.3e-64 249.2 284 48.9
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 1.8e-62 243.4 260 50.8
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 5.2e-62 241.9 234 52.1
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 1.9e-59 233.4 239 49.4
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 4.2e-59 232.3 300 45.3
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 1.2e-58 230.7 282 46.1
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 1.5e-56 223.8 198 58.1
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 4.3e-56 222.2 193 57.0
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 4.0e-54 215.7 253 45.5
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 2.0e-53 213.4 259 47.9
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 2.0e-53 213.4 248 48.8
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 2.7e-50 203.0 182 57.1
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 3.5e-50 202.6 175 57.7
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 1.0e-49 201.1 273 41.8
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 2.3e-49 199.9 190 56.8
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 2.5e-48 196.4 247 48.2
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 9.6e-48 194.5 269 42.4
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 3.6e-47 192.6 212 48.6
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 9.0e-46 188.0 252 45.6
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 4.5e-45 185.7 167 53.9
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 8.4e-44 181.4 116 72.4
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 7.9e-42 174.9 283 38.5
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 1.5e-29 134.0 134 53.0
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 1.9e-27 127.1 182 44.0
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 5.7e-24 115.5 89 59.6
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 1.3e-23 114.4 140 45.7
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 2.7e-10 70.1 40 70.0
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 1.4e-06 57.8 46 63.0


User provided reference genes

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