Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 3.6e-163 578.2 290 100.0
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 3.1e-58 229.6 228 58.3
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 2.7e-49 199.9 284 43.7
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 1.7e-48 197.2 290 45.5
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 1.8e-45 187.2 296 42.6
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 5.2e-45 185.7 269 46.5
TAR636G2227 Trochodendron aralioides HOM05D039687 ORTHO05D003325 1.6e-41 174.1 148 61.5
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 5.0e-40 169.1 288 46.9
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 6.8e-37 158.7 311 41.2
TAR636G0761 Trochodendron aralioides HOM05D004206 ORTHO05D003325 8.3e-35 151.8 135 65.9
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 7.1e-34 148.7 308 41.6
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 1.2e-33 147.9 300 40.3
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 4.6e-33 146.0 308 40.9
CSS0031426 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D000289 3.9e-32 142.9 224 44.2
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 9.5e-31 138.3 307 38.4
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 3.1e-29 133.3 261 40.6
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 4.0e-29 132.9 267 41.9
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 6.8e-29 132.1 316 35.8
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 4.4e-28 129.4 315 34.9
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 9.9e-28 128.3 263 37.3
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 6.4e-27 125.6 320 34.4
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 8.4e-27 125.2 267 38.2
MBI14_g07165_MAGBIO Magnolia biondii HOM05D039687 ORTHO05D003325 8.4e-27 125.2 283 38.2
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 1.4e-26 124.4 256 38.3
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 2.4e-26 123.6 269 36.1
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 5.4e-26 122.5 234 40.2
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 7.1e-26 122.1 264 40.2
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 1.2e-25 121.3 271 39.5
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 1.6e-25 120.9 309 34.6
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 3.5e-25 119.8 268 37.3
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 1.3e-24 117.9 322 35.1
MBI14_g24307_MAGBIO Magnolia biondii HOM05D039687 ORTHO05D003325 1.3e-24 117.9 265 38.1
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 3.9e-24 116.3 293 35.8
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 3.9e-24 116.3 257 40.1
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 5.1e-24 115.9 324 35.2
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 6.6e-24 115.5 145 53.1
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 8.6e-24 115.2 264 36.4
Nn2g12918 Nelumbo nucifera HOM05D004206 ORTHO05D003325 1.1e-23 114.8 129 58.9
Actinidia13126 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.9e-23 114.0 270 38.1
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 2.5e-23 113.6 205 41.0
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 4.3e-23 112.8 273 35.9
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 7.3e-23 112.1 279 38.7
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 9.6e-23 111.7 257 35.0
CDE02G3836 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 1.2e-22 111.3 214 42.1
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 2.8e-22 110.2 246 37.8
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 2.8e-22 110.2 266 35.0
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 3.6e-22 109.8 252 38.5
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 3.6e-22 109.8 263 36.1
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.4e-21 107.8 287 34.5
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 1.8e-21 107.5 260 38.1
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 1.8e-21 107.5 264 37.5
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 1.8e-21 107.5 293 33.4
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 3.1e-21 106.7 264 37.5
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 6.9e-21 105.5 249 38.2
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 6.9e-21 105.5 199 42.7
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 6.9e-21 105.5 260 35.0
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 8.9e-21 105.1 287 33.8
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 1.2e-20 104.8 273 38.8
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.5e-20 104.4 309 33.7
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 2.0e-20 104.0 201 42.3
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 2.0e-20 104.0 277 34.7
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 2.6e-20 103.6 266 35.7
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 4.4e-20 102.8 297 33.0
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 5.8e-20 102.4 296 33.1
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 7.6e-20 102.1 264 35.6
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 7.6e-20 102.1 205 42.4
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 7.6e-20 102.1 291 33.3
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 9.9e-20 101.7 307 34.2
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 9.9e-20 101.7 262 35.1
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 1.7e-19 100.9 206 40.8
Ca_08787_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 1.7e-19 100.9 257 36.6
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 2.2e-19 100.5 262 34.7
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 1.1e-18 98.2 263 34.6
CSS0043919 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 1.9e-18 97.4 154 40.9
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 1.9e-18 97.4 258 35.3
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 2.4e-18 97.1 297 33.3
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 3.2e-18 96.7 181 38.1
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 3.2e-18 96.7 260 35.8
vmacro03102 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 3.2e-18 96.7 203 37.4
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 4.2e-18 96.3 223 38.1
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 4.2e-18 96.3 202 35.1
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 4.2e-18 96.3 320 31.9
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 2.1e-17 94.0 270 32.6
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 2.1e-17 94.0 253 34.8
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 2.1e-17 94.0 199 36.7
SalBow4G2008 Salvia bowleyana HOM05D004206 ORTHO05D003325 2.1e-17 94.0 175 42.9
vmacro08670 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 2.1e-17 94.0 257 34.2
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 2.7e-17 93.6 205 37.6
CDE09G0187 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 6.0e-17 92.4 174 42.5
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 6.0e-17 92.4 174 41.4
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 6.0e-17 92.4 204 40.2
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 7.8e-17 92.0 286 30.4
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 1.0e-16 91.7 309 33.7
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 2.3e-16 90.5 163 42.9
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 3.0e-16 90.1 207 37.7
TWI77G0356 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 3.0e-16 90.1 203 39.4
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 5.1e-16 89.4 203 39.4
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 5.1e-16 89.4 283 33.9
ClCG10G020930 Citrullus lanatus HOM05D004206 ORTHO05D003325 6.6e-16 89.0 294 32.3
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 8.7e-16 88.6 297 32.3
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 1.1e-15 88.2 297 32.3
Lalb_Chr21g0314341 Lupinus albus HOM05D004206 ORTHO05D003325 1.5e-15 87.8 261 31.4
SEGI_05191 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 1.5e-15 87.8 281 32.0
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 1.5e-15 87.8 264 32.6
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 1.9e-15 87.4 248 34.3
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.9e-15 87.4 312 31.4
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 2.5e-15 87.0 200 39.0
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 7.3e-15 85.5 232 34.9
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 9.6e-15 85.1 158 38.6
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 9.6e-15 85.1 99 51.5
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 1.3e-14 84.7 265 34.3
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 1.6e-14 84.3 261 31.8
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 2.8e-14 83.6 183 37.7
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 3.6e-14 83.2 283 29.7
MELO3C009278.2 Cucumis melo HOM05D004206 ORTHO05D003325 1.1e-13 81.6 197 36.5
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 1.8e-13 80.9 214 34.6
Rhsim13G0085900 Rhododendron simsii HOM05D004206 ORTHO05D003325 1.8e-13 80.9 253 31.6
Lalb_Chr20g0113171 Lupinus albus HOM05D004206 ORTHO05D003325 4.0e-13 79.7 260 30.8
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 5.3e-13 79.3 209 35.4
Os05g0113500 Oryza sativa ssp. japonica HOM05D004206 ORTHO05D003325 5.3e-13 79.3 201 32.8
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 9.0e-13 78.6 209 35.4
Nn2g10438 Nelumbo nucifera HOM05D004206 ORTHO05D003325 9.0e-13 78.6 88 51.1
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 9.0e-13 78.6 279 30.1
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 1.5e-12 77.8 267 34.8
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 2.0e-12 77.4 137 44.5
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 3.4e-12 76.6 315 30.2
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 7.6e-12 75.5 206 34.5
CsaV3_3G035080 Cucumis sativus L. HOM05D004206 ORTHO05D003325 9.9e-12 75.1 196 34.7
Psat3g048840 Pisum sativum HOM05D004206 ORTHO05D003325 1.3e-11 74.7 161 38.5
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 2.2e-11 73.9 145 42.8
Actinidia11245 Actinidia chinensis HOM05D004206 ORTHO05D003325 3.8e-11 73.2 285 33.7
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 6.4e-11 72.4 160 37.5
PSO339G1969 Papaver somniferum HOM05D004206 ORTHO05D003325 6.4e-11 72.4 57 68.4
Zm00001eb266560 Zea mays HOM05D019293 ORTHO05D003325 8.4e-11 72.0 201 32.3
Medtr1g068825 Medicago truncatula HOM05D004206 ORTHO05D003325 1.1e-10 71.6 143 35.0
Sed0018769 Sechium edule HOM05D004206 ORTHO05D003325 1.4e-10 71.2 181 34.3
ECA238G1623 Erigeron canadensis HOM05D000150 ORTHO05D000108 1.9e-10 70.9 243 36.6
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 4.2e-10 69.7 152 38.8
TPR.G25989 Trifolium pratense HOM05D004206 ORTHO05D003325 5.4e-10 69.3 160 35.0
SEGI_11879 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 1.6e-09 67.8 147 35.4
HPP92_000797 Vanilla planifolia HOM05D004206 ORTHO05D003325 1.6e-09 67.8 119 42.9
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 3.5e-09 66.6 74 51.4
Hma1.2p1_1535F.1_g289470 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 6.0e-09 65.9 134 41.0
PSO648G0001 Papaver somniferum HOM05D004206 ORTHO05D003325 7.9e-09 65.5 340 29.4
ECA248G2846 Erigeron canadensis HOM05D004206 ORTHO05D003325 1.0e-08 65.1 173 32.9
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 1.0e-08 65.1 149 40.9
HPP92_009483 Vanilla planifolia HOM05D004206 ORTHO05D003325 1.8e-08 64.3 257 30.0
BcaC01g05613 Brassica carinata HOM05D008508 ORTHO05D003325 2.3e-08 63.9 149 32.9
C03p24300 Brassica napus HOM05D008508 ORTHO05D003325 2.3e-08 63.9 149 32.9
BolC3t14826H Brassica oleracea HOM05D008508 ORTHO05D003325 2.3e-08 63.9 149 32.9
HanXRQChr14g0459281 Helianthus annuus HOM05D004206 ORTHO05D003325 2.3e-08 63.9 192 30.7
unitig_578.g15702 Utricularia gibba HOM05D004206 ORTHO05D003325 5.1e-08 62.8 99 45.5
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 6.7e-08 62.4 202 30.7
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 8.7e-08 62.0 200 33.0
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 8.7e-08 62.0 200 33.0
Zm00001eb149900 Zea mays HOM05D033995 ORTHO05D003325 8.7e-08 62.0 84 44.0
Lj5g0023302 Lotus japonicus HOM05D004206 ORTHO05D003325 1.1e-07 61.6 206 30.6
CARHR132120 Cardamine hirsuta HOM05D008508 ORTHO05D003325 1.5e-07 61.2 84 46.4
TWI53G0070 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 1.9e-07 60.8 213 30.5
Aa31LG5G22930 Aethionema arabicum HOM05D008508 ORTHO05D003325 2.5e-07 60.5 111 39.6
Dinv37205 Davidia involucrata HOM05D004206 ORTHO05D003325 2.5e-07 60.5 130 35.4
Aa31LG10G9300 Aethionema arabicum HOM05D008508 ORTHO05D003325 5.6e-07 59.3 103 41.7
Carub.0005s2025 Capsella rubella HOM05D008508 ORTHO05D003325 5.6e-07 59.3 158 36.1
Sabra06G0062000 Salix brachista HOM05D004206 ORTHO05D003325 5.6e-07 59.3 143 39.9
SalBow8G2190 Salvia bowleyana HOM05D004206 ORTHO05D003325 9.6e-07 58.5 74 43.2
Glyma.13G132002 Glycine max HOM05D004206 ORTHO05D003325 1.6e-06 57.8 80 48.8
AL4G33980 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 2.1e-06 57.4 152 32.2
BcaB01g03773 Brassica carinata HOM05D008508 ORTHO05D003325 2.1e-06 57.4 171 31.6
BcaB06g28998 Brassica carinata HOM05D008508 ORTHO05D003325 2.8e-06 57.0 178 30.9
AL4G33940 Arabidopsis lyrata HOM05D008508 ORTHO05D003325 3.7e-06 56.6 62 48.4
BcaB02g09283 Brassica carinata HOM05D008508 ORTHO05D003325 3.7e-06 56.6 125 34.4
A03p20680 Brassica napus HOM05D008508 ORTHO05D003325 3.7e-06 56.6 95 40.0
BraA03t11309Z Brassica rapa HOM05D008508 ORTHO05D003325 3.7e-06 56.6 95 40.0
PGR004G2702 Punica granatum HOM05D004206 ORTHO05D003325 3.7e-06 56.6 91 41.8
BcaB02g07768 Brassica carinata HOM05D008508 ORTHO05D003325 6.2e-06 55.8 62 46.8
Thhalv10017918m.g Eutrema salsugineum HOM05D008508 ORTHO05D003325 6.2e-06 55.8 65 46.2
HanXRQChr11g0349321 Helianthus annuus HOM05D004206 ORTHO05D003325 6.2e-06 55.8 71 47.9
Cpa.g.sc11.170 Carica papaya HOM05D004206 ORTHO05D003325 8.1e-06 55.5 165 34.5
Os01g0814400 Oryza sativa ssp. japonica HOM05D033995 ORTHO05D003325 8.1e-06 55.5 83 44.6


User provided reference genes

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