Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 6.1e-157 558.1 458 100.0
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 5.7e-54 216.1 425 62.1
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 3.1e-52 210.3 458 64.4
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 3.2e-49 200.3 458 56.1
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 3.3e-46 190.3 499 46.5
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 5.7e-46 189.5 501 57.1
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 6.3e-45 186.0 457 63.2
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 6.3e-45 186.0 477 43.6
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 1.1e-44 185.3 459 52.9
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.6e-43 181.4 506 53.4
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 1.1e-41 175.3 464 61.6
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 4.0e-39 166.8 489 53.0
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 8.8e-39 165.6 473 53.9
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 2.0e-38 164.5 261 44.1
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 5.7e-38 162.9 475 43.8
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 1.3e-37 161.8 471 44.8
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.3e-37 161.8 452 56.6
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 2.2e-37 161.0 485 52.4
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 4.8e-37 159.8 501 54.3
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 6.3e-37 159.5 251 47.4
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.4e-36 158.3 455 54.7
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 3.1e-36 157.1 371 35.8
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 1.2e-35 155.2 490 56.5
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 2.7e-35 154.1 524 37.4
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 3.5e-35 153.7 496 56.2
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 7.7e-35 152.5 501 51.5
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.2e-34 151.0 475 57.3
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.2e-34 151.0 275 39.3
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 2.2e-34 151.0 483 51.1
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.9e-34 150.6 274 39.1
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 2.9e-34 150.6 493 55.8
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.8e-34 150.2 496 56.2
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 1.9e-33 147.9 500 45.8
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 3.2e-33 147.1 252 41.3
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 5.5e-33 146.4 558 50.9
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 1.2e-32 145.2 521 51.1
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 2.1e-32 144.4 520 51.3
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 6.1e-32 142.9 495 56.6
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 8.0e-32 142.5 480 51.0
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 1.4e-31 141.7 472 54.4
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 1.4e-31 141.7 513 51.9
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 1.2e-30 138.7 461 58.1
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.0e-30 137.9 480 46.7
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 4.4e-30 136.7 482 56.2
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 4.4e-30 136.7 462 57.4
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 4.4e-30 136.7 471 49.9
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 5.7e-30 136.3 479 56.2
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 1.3e-29 135.2 485 51.8
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 2.2e-29 134.4 480 54.4
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 2.8e-29 134.0 252 40.5
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 4.8e-29 133.3 316 51.9
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 4.8e-29 133.3 476 43.7
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 4.8e-29 133.3 282 38.7
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 6.3e-29 132.9 494 43.5
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 8.3e-29 132.5 458 53.1
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 1.1e-28 132.1 456 56.4
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 1.8e-28 131.3 489 55.8
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 1.8e-28 131.3 320 34.7
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 2.4e-28 131.0 481 52.4
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 4.1e-28 130.2 477 55.3
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 1.2e-27 128.6 485 48.9
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 1.2e-27 128.6 498 50.2
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 1.6e-27 128.3 467 53.5
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 2.7e-27 127.5 496 53.6
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 7.7e-27 125.9 486 54.3
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 2.3e-26 124.4 456 55.7
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 2.9e-26 124.0 444 57.2
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 5.0e-26 123.2 505 53.5
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 2.5e-25 120.9 485 44.1
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 5.5e-25 119.8 481 44.5
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 1.6e-24 118.2 481 54.7
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 6.8e-23 112.8 488 51.6
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 1.2e-22 112.1 509 42.6
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 1.7e-21 108.2 476 45.2
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 8.3e-21 105.9 297 35.4
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 1.4e-20 105.1 475 49.7
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 3.1e-20 104.0 473 53.3
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 5.4e-20 103.2 473 38.9
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 5.9e-19 99.8 467 47.3
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 1.3e-18 98.6 460 45.2
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 1.7e-18 98.2 232 35.3
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 2.3e-18 97.8 350 28.6
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 3.3e-17 94.0 459 42.9
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 1.2e-16 92.0 242 35.1
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 5.2e-15 86.7 316 32.3
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 8.9e-15 85.9 481 51.1
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 1.5e-14 85.1 261 28.7
Actinidia24231 Actinidia chinensis HOM05D007535 ORTHO05D008520 2.6e-14 84.3 171 35.7
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 5.8e-14 83.2 412 59.0
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 5.8e-14 83.2 457 49.5
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 9.8e-14 82.4 141 40.4
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.3e-13 82.0 278 28.8
BcaB08g36440 Brassica carinata HOM05D012474 ORTHO05D008520 2.9e-13 80.9 250 29.6
COL.COLO4_22633 Corchorus olitorius HOM05D007535 ORTHO05D008520 3.7e-13 80.5 184 34.2
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 9.2e-12 75.9 458 48.7
BraA10t43930Z Brassica rapa HOM05D012474 ORTHO05D008520 1.2e-11 75.5 250 26.4
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 1.2e-11 75.5 52 69.2
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 2.0e-11 74.7 459 47.7
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.0e-11 74.7 97 42.3
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 4.6e-11 73.6 52 69.2
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 6.0e-11 73.2 462 51.5
A10p18500 Brassica napus HOM05D012474 ORTHO05D008520 7.8e-11 72.8 250 26.0
AL6G33340 Arabidopsis lyrata HOM05D012474 ORTHO05D008520 3.0e-10 70.9 460 48.7
BolC9t58300H Brassica oleracea HOM05D012474 ORTHO05D008520 2.1e-08 64.7 252 26.6
C09p54250 Brassica napus HOM05D012474 ORTHO05D008520 6.2e-08 63.2 252 27.4
C09p54330 Brassica napus HOM05D012474 ORTHO05D008520 6.2e-08 63.2 74 43.2
AT5G22320 Arabidopsis thaliana HOM05D012474 ORTHO05D008520 1.4e-07 62.0 460 50.7
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 2.3e-07 61.2 74 41.9
CSS0011293 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 3.1e-07 60.8 42 71.4
Thhalv10013516m.g Eutrema salsugineum HOM05D012474 ORTHO05D008520 3.1e-07 60.8 249 24.5
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 3.1e-07 60.8 67 55.2


User provided reference genes

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