Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 2.3e-95 352.4 209 100.0
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 6.6e-66 254.6 212 71.2
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 4.4e-38 162.2 209 52.6
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 8.4e-37 157.9 207 53.6
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 7.1e-36 154.8 209 52.2
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 1.2e-35 154.1 170 59.4
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 2.5e-33 146.4 190 53.7
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 3.3e-33 146.0 200 54.5
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 3.3e-33 146.0 197 53.8
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 7.3e-33 144.8 199 51.8
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 9.6e-33 144.4 216 46.8
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 1.4e-31 140.6 214 52.8
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 9.9e-30 134.4 218 45.0
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 1.3e-29 134.0 215 47.9
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 1.3e-29 134.0 210 47.1
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 1.3e-29 134.0 222 44.6
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 1.7e-29 133.7 200 54.5
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 2.2e-29 133.3 213 46.9
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 3.8e-29 132.5 151 57.6
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 4.9e-29 132.1 109 69.7
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 6.4e-29 131.7 217 44.7
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 1.1e-28 131.0 128 60.2
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 1.4e-28 130.6 192 52.1
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 1.4e-28 130.6 109 68.8
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 4.2e-28 129.0 219 42.5
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 5.4e-28 128.6 115 67.0
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 1.2e-27 127.5 204 48.0
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 1.2e-27 127.5 151 55.6
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.2e-27 127.5 197 47.7
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 1.6e-27 127.1 149 53.0
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 2.1e-27 126.7 214 46.7
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.1e-27 126.7 197 47.7
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 3.5e-27 125.9 137 56.2
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 4.6e-27 125.6 212 45.8
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 6.0e-27 125.2 133 56.4
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 7.9e-27 124.8 219 42.9
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 1.3e-26 124.0 151 57.6
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 1.3e-26 124.0 196 50.0
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 1.3e-26 124.0 170 53.5
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 1.3e-26 124.0 194 47.4
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 1.8e-26 123.6 117 62.4
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.8e-26 123.6 181 48.1
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 3.0e-26 122.9 184 46.7
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 3.9e-26 122.5 109 69.7
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 3.9e-26 122.5 129 59.7
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 5.1e-26 122.1 151 57.0
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 6.7e-26 121.7 151 57.0
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 6.7e-26 121.7 176 50.6
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 8.7e-26 121.3 143 55.9
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 8.7e-26 121.3 199 45.7
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 1.1e-25 120.9 182 48.9
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 1.1e-25 120.9 199 47.7
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 1.1e-25 120.9 114 61.4
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 1.1e-25 120.9 126 57.9
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 1.5e-25 120.6 158 52.5
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.5e-25 120.6 177 48.6
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 1.9e-25 120.2 111 60.4
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 2.5e-25 119.8 190 43.7
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 2.5e-25 119.8 146 53.4
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 3.3e-25 119.4 172 51.2
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 4.3e-25 119.0 112 66.1
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 5.6e-25 118.6 149 56.4
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 5.6e-25 118.6 111 60.4
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 5.6e-25 118.6 167 50.3
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 7.4e-25 118.2 175 48.6
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 7.4e-25 118.2 151 51.0
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 2.8e-24 116.3 84 75.0
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 4.8e-24 115.5 85 75.3
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 8.1e-24 114.8 151 51.0
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 1.1e-23 114.4 175 44.0
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 1.4e-23 114.0 179 47.5
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.8e-23 113.6 117 58.1
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 2.4e-23 113.2 162 46.9
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 2.4e-23 113.2 189 43.4
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 3.1e-23 112.8 180 47.8
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 4.0e-23 112.5 179 48.6
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 5.3e-23 112.1 179 48.6
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 6.9e-23 111.7 156 50.6
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 1.2e-22 110.9 181 44.8
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 1.2e-22 110.9 151 54.3
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 1.2e-22 110.9 185 46.5
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 2.6e-22 109.8 192 41.1
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 4.5e-22 109.0 141 49.6
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 5.8e-22 108.6 136 49.3
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.3e-21 107.5 128 54.7
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 1.3e-21 107.5 138 55.1
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 1.7e-21 107.1 125 53.6
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.7e-21 107.1 93 67.7
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 1.7e-21 107.1 130 53.1
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 2.2e-21 106.7 138 55.1
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.2e-21 106.7 110 60.0
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 2.9e-21 106.3 126 54.0
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 2.9e-21 106.3 100 62.0
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 8.4e-21 104.8 174 44.3
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 1.1e-20 104.4 167 43.7
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 1.4e-20 104.0 132 50.8
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 3.2e-20 102.8 192 43.8
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 4.2e-20 102.4 128 50.8
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 5.5e-20 102.1 173 43.4
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 1.2e-19 100.9 102 56.9
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 1.3e-18 97.4 188 43.1
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 3.9e-18 95.9 139 46.8
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 6.7e-18 95.1 153 42.5
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 1.5e-17 94.0 181 40.3
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 1.9e-17 93.6 138 44.9
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 2.5e-17 93.2 187 43.3
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 7.4e-17 91.7 103 51.5
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 1.3e-16 90.9 93 54.8
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 5.3e-15 85.5 130 41.5
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 5.3e-15 85.5 120 50.0
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 2.0e-14 83.6 165 37.0
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 2.0e-14 83.6 145 46.2
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 1.0e-13 81.3 125 48.8
Aa31LG9G4610 Aethionema arabicum HOM05D005884 ORTHO05D007282 8.4e-13 78.2 145 38.6
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 8.4e-13 78.2 67 64.2
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 1.9e-12 77.0 176 39.8
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 5.5e-12 75.5 92 51.1
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 5.5e-12 75.5 92 51.1
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 7.1e-12 75.1 90 52.2
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 7.1e-12 75.1 90 52.2
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 9.3e-12 74.7 99 49.5
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 9.3e-12 74.7 133 42.1
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 2.1e-11 73.6 115 42.6
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 2.7e-11 73.2 86 48.8
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 6.7e-10 68.6 94 45.7
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 4.3e-09 65.9 48 68.8
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 1.6e-08 63.9 59 59.3
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 2.2e-08 63.5 106 42.5


User provided reference genes

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