Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 6.2e-182 640.6 306 100.0
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 1.1e-138 496.9 302 78.1
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 1.0e-136 490.3 291 78.0
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 1.4e-133 479.9 288 78.1
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 7.0e-133 477.6 289 76.1
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 7.0e-133 477.6 303 74.9
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 2.3e-131 472.6 291 76.3
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 3.8e-131 471.9 306 72.5
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 6.6e-131 471.1 291 75.9
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 7.2e-130 467.6 290 74.8
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 4.7e-129 464.9 289 74.0
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 6.1e-129 464.5 288 75.3
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.0e-128 463.8 284 75.7
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.4e-128 463.4 284 75.7
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 1.8e-128 463.0 284 76.1
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 5.2e-128 461.5 293 73.7
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 6.8e-128 461.1 309 71.8
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 9.8e-127 457.2 300 70.3
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.3e-126 456.8 303 71.9
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 3.7e-126 455.3 306 70.3
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 1.1e-125 453.8 300 69.7
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 1.4e-125 453.4 292 74.0
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 9.2e-125 450.7 289 71.6
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.6e-124 449.9 318 67.9
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 2.7e-124 449.1 301 70.8
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 3.5e-124 448.7 289 72.7
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 4.5e-124 448.4 282 73.8
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 5.9e-124 448.0 300 70.3
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 5.9e-124 448.0 288 72.9
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 2.9e-123 445.7 284 71.8
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 2.9e-123 445.7 300 71.3
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 8.6e-123 444.1 300 69.0
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 8.6e-123 444.1 306 67.6
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 1.1e-122 443.7 288 72.9
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 1.5e-122 443.4 292 72.9
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 1.9e-122 443.0 287 72.5
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 4.3e-122 441.8 305 67.2
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 7.3e-122 441.0 287 72.1
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 9.5e-122 440.7 291 70.8
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 2.1e-121 439.5 289 70.2
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 3.6e-121 438.7 287 71.8
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 4.7e-121 438.3 296 69.3
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 8.0e-121 437.6 287 71.4
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 8.0e-121 437.6 283 71.4
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 8.0e-121 437.6 301 67.1
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 8.0e-121 437.6 302 67.9
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 8.0e-121 437.6 301 68.8
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 3.1e-120 435.6 302 67.5
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 6.8e-120 434.5 302 67.2
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 6.8e-120 434.5 288 72.2
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 8.9e-120 434.1 286 69.9
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 5.8e-119 431.4 282 71.6
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 5.8e-119 431.4 304 67.8
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 5.8e-119 431.4 311 67.8
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 7.5e-119 431.0 297 67.7
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 6.4e-118 427.9 288 70.1
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 1.1e-117 427.2 341 62.2
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 1.1e-117 427.2 287 69.7
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 7.0e-117 424.5 305 67.9
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 2.7e-116 422.5 304 67.8
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 3.5e-116 422.2 293 68.3
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 3.0e-115 419.1 288 67.7
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 1.5e-114 416.8 284 68.3
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 1.5e-114 416.8 290 67.9
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 2.5e-114 416.0 288 67.4
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 2.5e-114 416.0 305 63.6
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 7.3e-114 414.5 286 66.4
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 9.5e-114 414.1 282 68.8
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 1.6e-113 413.3 292 65.8
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 4.7e-113 411.8 295 66.4
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 4.0e-112 408.7 293 68.3
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 2.0e-111 406.4 288 65.6
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 2.9e-110 402.5 273 69.6
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.9e-109 399.8 292 66.4
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 2.1e-108 396.4 287 68.3
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 1.0e-107 394.0 283 64.0
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 5.1e-107 391.7 286 63.6
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 7.3e-106 387.9 290 62.4
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 7.3e-106 387.9 290 62.4
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 7.3e-106 387.9 290 62.8
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 9.5e-106 387.5 291 62.5
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 1.2e-105 387.1 283 64.0
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 1.6e-105 386.7 290 62.8
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 2.8e-105 386.0 284 66.9
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 8.9e-104 380.9 363 52.1
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 8.9e-104 380.9 237 76.8
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 2.6e-103 379.4 306 63.4
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 1.4e-101 373.6 290 62.8
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 2.3e-99 366.3 293 60.8
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 5.8e-95 351.7 288 58.7
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 1.7e-94 350.1 241 69.7
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 1.3e-91 340.5 279 57.7
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 2.3e-91 339.7 462 44.4
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 1.1e-90 337.4 306 55.2
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 8.1e-89 331.3 281 59.4
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 8.1e-89 331.3 283 59.4
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 5.8e-87 325.1 205 70.2
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 7.6e-87 324.7 281 54.1
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 4.9e-86 322.0 285 55.1
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 1.1e-85 320.9 257 61.5
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 6.0e-84 315.1 283 53.0
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 3.7e-73 279.3 287 51.6
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 3.4e-71 272.7 181 71.8
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 2.9e-70 269.6 352 42.3
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.5e-69 266.5 287 49.1
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 3.1e-64 249.6 191 61.8
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 1.1e-61 241.1 164 68.3
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 9.7e-58 228.0 203 54.2
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 2.7e-52 209.9 173 56.6
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 9.1e-40 168.3 118 64.4
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.0e-38 162.5 144 59.0
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 5.7e-34 149.1 115 57.4
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 2.2e-33 147.1 209 42.6
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 2.2e-30 137.1 434 25.3
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 4.0e-27 126.3 262 29.0
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 1.6e-20 104.4 71 71.8
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 3.6e-20 103.2 68 69.1
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 1.3e-17 94.7 60 71.7
Nitab4.5_0001068g0110 Nicotiana tabacum HOM05D006681 ORTHO05D008338 3.6e-12 76.6 53 67.9
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 1.1e-08 65.1 41 70.7


User provided reference genes

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