Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1647 Trochodendron aralioides HOM05D006858 ORTHO05D008767 3.7e-84 316.2 419 100.0
TAR628G1172 Trochodendron aralioides HOM05D006858 ORTHO05D008767 6.8e-70 268.9 178 80.9
Thecc.02G097300 Theobroma cacao HOM05D006858 ORTHO05D008767 9.5e-48 195.3 175 56.0
CiPaw.06G142100 Carya illinoinensis HOM05D006858 ORTHO05D008767 3.4e-45 186.8 155 61.3
COL.COLO4_32688 Corchorus olitorius HOM05D006858 ORTHO05D008767 7.5e-45 185.7 172 70.3
MSTRG.27720 Avicennia marina HOM05D006858 ORTHO05D008767 1.3e-44 184.9 184 50.5
QL11p037400 Quercus lobata HOM05D006858 ORTHO05D008767 1.7e-44 184.5 155 62.6
Atru.chr5.2775 Acer truncatum HOM05D006858 ORTHO05D008767 4.1e-43 179.9 152 61.2
CSS0006454 Camellia sinensis var. sinensis HOM05D006858 ORTHO05D008767 4.1e-43 179.9 157 59.9
CSS0049463 Camellia sinensis var. sinensis HOM05D006858 ORTHO05D008767 4.1e-43 179.9 157 59.9
Cfa005452 Carpinus fangiana HOM05D006858 ORTHO05D008767 1.6e-42 177.9 155 60.0
Dinv23584 Davidia involucrata HOM05D006858 ORTHO05D008767 2.7e-42 177.2 155 61.3
Haze_01905 Corylus avellana HOM05D006858 ORTHO05D008767 1.3e-41 174.9 155 58.7
Gohir.D02G212500 Gossypium hirsutum HOM05D006858 ORTHO05D008767 2.3e-41 174.1 151 60.3
Manes.17G093600 Manihot esculenta HOM05D006858 ORTHO05D008767 8.6e-41 172.2 150 56.7
vmacro13394 Vaccinium macrocarpon HOM05D006858 ORTHO05D008767 1.1e-40 171.8 151 59.6
Potri.009G105600 Populus trichocarpa HOM05D006858 ORTHO05D008767 1.5e-40 171.4 157 55.4
TWI31G0517 Tripterygium wilfordii HOM05D006858 ORTHO05D008767 1.5e-40 171.4 157 55.4
Gohir.A03G191600 Gossypium hirsutum HOM05D006858 ORTHO05D008767 1.9e-40 171.0 150 58.7
FvH4_2g06720 Fragaria vesca HOM05D006858 ORTHO05D008767 4.3e-40 169.9 155 57.4
FAN24G1409 Fragaria x ananassa HOM05D006858 ORTHO05D008767 4.3e-40 169.9 155 57.4
Duzib132G0284 Durio zibethinus HOM05D006858 ORTHO05D008767 9.5e-40 168.7 149 58.4
Aqoxy6G01416 Aquilegia oxysepala HOM05D006858 ORTHO05D008767 1.2e-39 168.3 156 55.1
CANSAT25G3187 Cannabis sativa HOM05D006858 ORTHO05D008767 2.8e-39 167.2 157 54.8
RcHm_v2.0_Chr6g0258901 Rosa chinensis HOM05D006858 ORTHO05D008767 2.8e-39 167.2 155 56.8
Sc08g0000040 Simmondsia chinensis HOM05D006858 ORTHO05D008767 2.8e-39 167.2 155 54.2
FAN27G2753 Fragaria x ananassa HOM05D006858 ORTHO05D008767 3.6e-39 166.8 155 56.1
PGR142G0738 Punica granatum HOM05D006858 ORTHO05D008767 3.6e-39 166.8 156 53.8
Rhsim05G0081400 Rhododendron simsii HOM05D006858 ORTHO05D008767 4.7e-39 166.4 151 57.0
Nn4g22909 Nelumbo nucifera HOM05D006858 ORTHO05D008767 8.1e-39 165.6 151 57.0
Ciclev10028118m.g Citrus clementina HOM05D006858 ORTHO05D008767 1.4e-38 164.9 152 54.6
MD10G1090200 Malus domestica HOM05D006858 ORTHO05D008767 1.8e-38 164.5 155 54.8
Sabra09G0080800 Salix brachista HOM05D006858 ORTHO05D008767 1.8e-38 164.5 156 52.6
EL10Ac9g21827 Beta vulgaris HOM05D006858 ORTHO05D008767 3.1e-38 163.7 154 53.9
Sopen01g050630 Solanum pennellii HOM05D006858 ORTHO05D008767 4.0e-38 163.3 152 54.6
PGSC0003DMG401025809 Solanum tuberosum HOM05D006858 ORTHO05D008767 4.0e-38 163.3 152 54.6
SHI05381 Sapria himalayana HOM05D006858 ORTHO05D008767 6.8e-38 162.5 168 50.6
THA.LOC104804370 Tarenaya hassleriana HOM05D006858 ORTHO05D008767 8.9e-38 162.2 147 56.5
FAN15G2218 Fragaria x ananassa HOM05D006858 ORTHO05D008767 2.0e-37 161.0 149 56.4
FAN20G2333 Fragaria x ananassa HOM05D006858 ORTHO05D008767 3.4e-37 160.2 150 56.0
VMungo1215G0504 Vigna mungo HOM05D006858 ORTHO05D008767 3.4e-37 160.2 149 54.4
ECA234G1772 Erigeron canadensis HOM05D006858 ORTHO05D008767 4.4e-37 159.8 152 53.9
Eucgr.I01171 Eucalyptus grandis HOM05D006858 ORTHO05D008767 5.8e-37 159.5 156 51.9
Prupe.7G039700 Prunus persica HOM05D006858 ORTHO05D008767 5.8e-37 159.5 154 53.2
Glyma.20G010100 Glycine max HOM05D006858 ORTHO05D008767 7.5e-37 159.1 149 54.4
HanXRQChr10g0303231 Helianthus annuus HOM05D006858 ORTHO05D008767 7.5e-37 159.1 152 53.9
AUR62016628 Chenopodium quinoa HOM05D006858 ORTHO05D008767 9.9e-37 158.7 157 51.6
AUR62011433 Chenopodium quinoa HOM05D006858 ORTHO05D008767 1.7e-36 157.9 158 50.6
Phvul.003G012700 Phaseolus vulgaris HOM05D006858 ORTHO05D008767 2.9e-36 157.1 149 53.0
Peaxi162Scf00016g00164 Petunia axillaris HOM05D006858 ORTHO05D008767 6.4e-36 156.0 157 51.6
PGSC0003DMG402025785 Solanum tuberosum HOM05D006858 ORTHO05D008767 1.1e-35 155.2 153 51.0
arahy.Tifrunner.gnm1.ann1.3PJ361 Arachis hypogaea HOM05D006858 ORTHO05D008767 1.9e-35 154.5 150 52.0
arahy.Tifrunner.gnm1.ann1.U9N0YZ Arachis hypogaea HOM05D006858 ORTHO05D008767 2.4e-35 154.1 150 51.3
Nitab4.5_0004334g0100 Nicotiana tabacum HOM05D006858 ORTHO05D008767 2.4e-35 154.1 154 50.6
Nitab4.5_0005583g0010 Nicotiana tabacum HOM05D006858 ORTHO05D008767 4.1e-35 153.3 154 50.6
DCAR_022059 Daucus carota HOM05D006858 ORTHO05D008767 5.4e-35 152.9 151 51.7
Lsat_1_v5_gn_5_113361 Lactuca sativa HOM05D006858 ORTHO05D008767 5.4e-35 152.9 152 52.6
CAN.G322.19 Capsicum annuum HOM05D006858 ORTHO05D008767 1.6e-34 151.4 153 51.0
Lalb_Chr10g0095481 Lupinus albus HOM05D006858 ORTHO05D008767 2.7e-34 150.6 150 52.7
C04p46110 Brassica napus HOM05D006858 ORTHO05D008767 6.0e-34 149.4 148 51.4
BolC4t26195H Brassica oleracea HOM05D006858 ORTHO05D008767 6.0e-34 149.4 148 51.4
Gorai.005G240500 Gossypium raimondii HOM05D006858 ORTHO05D008767 1.3e-33 148.3 134 58.2
Ca_12460_v3 Cicer arietinum L. HOM05D006858 ORTHO05D008767 1.7e-33 147.9 149 52.3
Ca_29767_v3 Cicer arietinum L. HOM05D006858 ORTHO05D008767 1.7e-33 147.9 149 52.3
Lj9A359T74 Lonicera japonica HOM05D006858 ORTHO05D008767 2.3e-33 147.5 185 46.5
GSVIVG01031787001 Vitis vinifera HOM05D006858 ORTHO05D008767 3.0e-33 147.1 135 57.0
A04p12420 Brassica napus HOM05D006858 ORTHO05D008767 3.9e-33 146.7 148 56.8
BraA04t16905Z Brassica rapa HOM05D006858 ORTHO05D008767 3.9e-33 146.7 148 56.8
Migut.N01200 Erythranthe guttata HOM05D006858 ORTHO05D008767 6.6e-33 146.0 152 46.7
Aa31LG9G16400 Aethionema arabicum HOM05D006858 ORTHO05D008767 8.6e-33 145.6 148 51.4
Lj2g0007949 Lotus japonicus HOM05D006858 ORTHO05D008767 8.6e-33 145.6 150 51.3
Sp7g02300 Schrenkiella parvula HOM05D006858 ORTHO05D008767 1.1e-32 145.2 148 49.3
BcaB06g27362 Brassica carinata HOM05D006858 ORTHO05D008767 1.9e-32 144.4 149 51.7
ClCG02G005770 Citrullus lanatus HOM05D006858 ORTHO05D008767 3.3e-32 143.7 148 50.0
Thhalv10027654m.g Eutrema salsugineum HOM05D006858 ORTHO05D008767 3.3e-32 143.7 147 50.3
AT5G39710 Arabidopsis thaliana HOM05D006858 ORTHO05D008767 5.6e-32 142.9 147 50.3
RcHm_v2.0_Chr7g0233241 Rosa chinensis HOM05D006858 ORTHO05D008767 7.3e-32 142.5 155 52.9
Ah.01g020130 Amaranthus hybridus HOM05D006858 ORTHO05D008767 4.7e-31 139.8 157 44.6
Sed0026070 Sechium edule HOM05D006858 ORTHO05D008767 6.2e-31 139.4 149 49.0
Oeu013687.1 Olea europaea HOM05D006858 ORTHO05D008767 1.1e-30 138.7 138 50.0
Medtr1g033960 Medicago truncatula HOM05D006858 ORTHO05D008767 3.1e-30 137.1 149 48.3
Psat6g096520 Pisum sativum HOM05D006858 ORTHO05D008767 5.2e-30 136.3 149 48.3
CDE09G0572 Ceratophyllum demersum HOM05D006858 ORTHO05D008767 7.6e-29 132.5 145 46.9
TPR.G11140 Trifolium pratense HOM05D006858 ORTHO05D008767 1.3e-28 131.7 149 47.7
Os06g0152500 Oryza sativa ssp. japonica HOM05D006858 ORTHO05D008767 2.9e-28 130.6 147 44.9
Zm00001eb376700 Zea mays HOM05D006858 ORTHO05D008767 4.9e-28 129.8 152 44.7
CsaV3_7G008750 Cucumis sativus L. HOM05D006858 ORTHO05D008767 6.4e-28 129.4 147 44.9
MELO3C018437.2 Cucumis melo HOM05D006858 ORTHO05D008767 1.2e-26 125.2 147 44.2
SGA_v2.0_scaffold13G06572 Striga asiatica HOM05D006858 ORTHO05D008767 2.3e-25 120.9 152 42.1
Zm00001eb348200 Zea mays HOM05D006858 ORTHO05D008767 6.2e-23 112.8 152 57.2
Cpa.g.sc62.38 Carica papaya HOM05D006858 ORTHO05D008767 8.1e-23 112.5 75 74.7
Prupe.8G118500 Prunus persica HOM05D006858 ORTHO05D008767 3.9e-17 93.6 134 44.0
Carub.0007s3617 Capsella rubella HOM05D006858 ORTHO05D008767 2.0e-13 81.3 147 33.3
Actinidia17852 Actinidia chinensis HOM05D006858 ORTHO05D008767 1.7e-12 78.2 121 40.5
AL7G50600 Arabidopsis lyrata HOM05D006858 ORTHO05D008767 4.2e-11 73.6 48 66.7
CAN.G322.17 Capsicum annuum HOM05D002196 ORTHO05D011452 1.5e-08 65.1 50 60.0
ATR0043G025 Amborella trichopoda HOM05D006858 ORTHO05D008767 7.4e-08 62.8 83 42.2
TPR.G6774 Trifolium pratense HOM05D006858 ORTHO05D008767 2.1e-07 61.2 65 49.2
ATR1120G070 Amborella trichopoda HOM05D006858 ORTHO05D008767 3.7e-07 60.5 38 68.4
Cpa.g.c47004 Carica papaya HOM05D006858 ORTHO05D008767 3.1e-06 57.4 35 68.6
Carub.0007s3621 Capsella rubella HOM05D006858 ORTHO05D008767 9.0e-06 55.8 36 63.9


User provided reference genes

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