Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.8e-47 192.2 96 100.0
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 1.1e-39 166.4 87 97.7
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 3.9e-37 157.9 86 94.2
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 5.2e-34 147.5 83 88.0
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 4.4e-33 144.4 81 88.9
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 5.8e-33 144.1 86 81.4
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 1.3e-32 142.9 81 87.7
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 1.3e-32 142.9 81 87.7
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 1.7e-32 142.5 81 87.7
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 1.7e-32 142.5 86 83.7
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 1.7e-32 142.5 82 85.4
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 4.9e-32 141.0 81 87.7
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 6.4e-32 140.6 81 86.4
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 6.4e-32 140.6 81 86.4
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 8.3e-32 140.2 81 86.4
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 4.1e-31 137.9 86 76.7
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 4.1e-31 137.9 86 76.7
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 4.1e-31 137.9 81 85.2
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 5.4e-31 137.5 81 81.5
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 7.0e-31 137.1 86 79.1
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 7.0e-31 137.1 86 80.2
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 7.0e-31 137.1 86 80.2
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 7.0e-31 137.1 86 79.1
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 9.2e-31 136.7 79 88.6
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 9.2e-31 136.7 86 76.7
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 9.2e-31 136.7 81 85.2
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 9.2e-31 136.7 81 84.0
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 1.2e-30 136.3 87 75.9
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 1.2e-30 136.3 81 81.5
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 1.2e-30 136.3 81 84.0
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 1.6e-30 136.0 81 82.7
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 1.6e-30 136.0 82 79.3
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 1.6e-30 136.0 81 81.5
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 2.0e-30 135.6 81 80.2
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 2.0e-30 135.6 81 82.7
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 2.0e-30 135.6 81 81.5
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 2.7e-30 135.2 81 82.7
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 2.7e-30 135.2 81 84.0
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.7e-30 135.2 81 84.0
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 2.7e-30 135.2 81 79.0
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 3.5e-30 134.8 81 81.5
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 3.5e-30 134.8 81 82.7
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 4.6e-30 134.4 86 76.7
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 6.0e-30 134.0 81 79.0
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 6.0e-30 134.0 81 82.7
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 6.0e-30 134.0 81 82.7
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 6.0e-30 134.0 81 82.7
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 6.0e-30 134.0 81 79.0
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 6.0e-30 134.0 81 79.0
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 7.8e-30 133.7 86 76.7
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 7.8e-30 133.7 81 81.5
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 1.0e-29 133.3 81 82.7
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 1.0e-29 133.3 81 81.5
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 1.3e-29 132.9 88 73.9
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 1.3e-29 132.9 81 82.7
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 1.7e-29 132.5 81 79.0
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 1.7e-29 132.5 81 79.0
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 1.7e-29 132.5 81 80.2
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 1.7e-29 132.5 81 79.0
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 1.7e-29 132.5 81 79.0
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 2.3e-29 132.1 81 79.0
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.3e-29 132.1 81 81.5
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 3.0e-29 131.7 81 76.5
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 3.0e-29 131.7 81 81.5
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 3.9e-29 131.3 86 75.6
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 3.9e-29 131.3 81 79.0
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 3.9e-29 131.3 81 79.0
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 3.9e-29 131.3 81 79.0
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 3.9e-29 131.3 86 77.9
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 5.0e-29 131.0 81 80.2
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 5.0e-29 131.0 81 79.0
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 8.6e-29 130.2 81 79.0
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 8.6e-29 130.2 81 80.2
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 1.1e-28 129.8 86 75.6
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.9e-28 129.0 81 79.0
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 4.3e-28 127.9 81 77.8
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 7.3e-28 127.1 79 79.7
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 7.3e-28 127.1 81 76.5
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 7.3e-28 127.1 81 79.0
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 1.2e-27 126.3 81 77.8
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 1.2e-27 126.3 81 79.0
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.6e-27 125.9 86 72.1
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 1.6e-27 125.9 81 76.5
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.1e-27 125.6 81 77.8
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 2.1e-27 125.6 80 82.5
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 8.0e-27 123.6 81 75.3
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 1.1e-26 123.2 81 75.3
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.1e-26 123.2 81 76.5
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 1.4e-26 122.9 80 77.5
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 1.8e-26 122.5 76 75.0
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 2.3e-26 122.1 86 69.8
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 3.1e-26 121.7 86 68.6
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 4.0e-26 121.3 87 69.0
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 5.2e-26 120.9 81 71.6
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 6.8e-26 120.6 81 72.8
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 1.2e-25 119.8 86 70.9
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 3.4e-25 118.2 81 72.8
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 9.8e-25 116.7 82 73.2
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 1.3e-24 116.3 81 72.8
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 1.1e-23 113.2 88 67.0
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 6.0e-22 107.5 81 71.6
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 3.2e-15 85.1 81 58.0
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 4.1e-15 84.7 54 74.1
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 4.1e-15 84.7 87 49.4
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 1.2e-14 83.2 53 73.6
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 3.0e-13 78.6 65 63.1
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 2.4e-10 68.9 72 48.6
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 6.8e-10 67.4 85 45.9
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 2.0e-09 65.9 93 41.9


User provided reference genes

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