Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1587 Trochodendron aralioides HOM05D005943 ORTHO05D007328 6.4e-79 297.4 150 100.0
Nn3g21529 Nelumbo nucifera HOM05D005943 ORTHO05D007328 2.3e-44 182.6 154 64.9
ATR0796G119 Amborella trichopoda HOM05D005943 ORTHO05D007328 3.9e-44 181.8 154 66.2
Duzib128G1848 Durio zibethinus HOM05D005943 ORTHO05D007328 3.9e-44 181.8 163 63.2
Dinv40356 Davidia involucrata HOM05D005943 ORTHO05D007328 5.1e-44 181.4 154 66.2
CSS0008719 Camellia sinensis var. sinensis HOM05D005943 ORTHO05D007328 8.7e-44 180.6 154 64.9
Nn4g25770 Nelumbo nucifera HOM05D005943 ORTHO05D007328 8.7e-44 180.6 154 64.9
GSVIVG01031169001 Vitis vinifera HOM05D005943 ORTHO05D007328 1.1e-43 180.3 154 64.9
Duzib177G0451 Durio zibethinus HOM05D005943 ORTHO05D007328 1.5e-43 179.9 154 65.6
Thecc.05G315300 Theobroma cacao HOM05D005943 ORTHO05D007328 1.9e-43 179.5 154 65.6
COL.COLO4_10548 Corchorus olitorius HOM05D005943 ORTHO05D007328 2.5e-43 179.1 153 66.0
TWI12G0949 Tripterygium wilfordii HOM05D005943 ORTHO05D007328 2.5e-43 179.1 154 64.9
PSO170G5805 Papaver somniferum HOM05D005943 ORTHO05D007328 3.3e-43 178.7 154 63.6
PSO407G0008 Papaver somniferum HOM05D005943 ORTHO05D007328 3.3e-43 178.7 154 63.6
Prupe.6G319400 Prunus persica HOM05D005943 ORTHO05D007328 3.3e-43 178.7 154 64.3
Gohir.A11G269200 Gossypium hirsutum HOM05D005943 ORTHO05D007328 4.3e-43 178.3 154 64.9
Gohir.D11G279400 Gossypium hirsutum HOM05D005943 ORTHO05D007328 4.3e-43 178.3 154 64.9
Aqoxy5G00777 Aquilegia oxysepala HOM05D005943 ORTHO05D007328 5.6e-43 177.9 154 63.6
Dinv30834 Davidia involucrata HOM05D005943 ORTHO05D007328 5.6e-43 177.9 154 63.6
RcHm_v2.0_Chr3g0456101 Rosa chinensis HOM05D005943 ORTHO05D007328 7.3e-43 177.6 155 63.2
Gorai.007G301600 Gossypium raimondii HOM05D005943 ORTHO05D007328 9.6e-43 177.2 154 64.3
Potri.005G023600 Populus trichocarpa HOM05D005943 ORTHO05D007328 9.6e-43 177.2 154 64.3
Sabra13G0012200 Salix brachista HOM05D001727 ORTHO05D007328 9.6e-43 177.2 154 63.6
TWI56G0702 Tripterygium wilfordii HOM05D005943 ORTHO05D007328 9.6e-43 177.2 155 63.9
Eucgr.L02935 Eucalyptus grandis HOM05D005943 ORTHO05D007328 1.3e-42 176.8 154 64.3
Atru.chr2.102 Acer truncatum HOM05D001727 ORTHO05D001758 2.1e-42 176.0 153 64.1
Cpa.g.sc48.107 Carica papaya HOM05D005943 ORTHO05D007328 2.1e-42 176.0 154 63.6
MD04G1198400 Malus domestica HOM05D005943 ORTHO05D007328 2.1e-42 176.0 154 63.6
Potri.013G013700 Populus trichocarpa HOM05D005943 ORTHO05D007328 2.1e-42 176.0 154 63.6
Manes.08G116100 Manihot esculenta HOM05D005943 ORTHO05D007328 3.6e-42 175.3 154 63.6
CDE02G2801 Ceratophyllum demersum HOM05D005943 ORTHO05D007328 4.8e-42 174.9 154 61.7
MD12G1211900 Malus domestica HOM05D005943 ORTHO05D007328 4.8e-42 174.9 154 63.0
PGR031G0471 Punica granatum HOM05D005943 ORTHO05D007328 4.8e-42 174.9 154 63.6
QL03p019642 Quercus lobata HOM05D005943 ORTHO05D007328 4.8e-42 174.9 154 64.3
CsaV3_1G038680 Cucumis sativus L. HOM05D005943 ORTHO05D007328 6.2e-42 174.5 154 63.0
Sabra05G0029200 Salix brachista HOM05D001727 ORTHO05D050481 6.2e-42 174.5 153 64.1
Migut.E01764 Erythranthe guttata HOM05D005943 ORTHO05D007328 1.1e-41 173.7 154 63.6
CANSAT35G1584 Cannabis sativa HOM05D005943 ORTHO05D007328 1.4e-41 173.3 154 62.3
MELO3C015293.2 Cucumis melo HOM05D001727 ORTHO05D001758 1.8e-41 172.9 153 62.7
HanXRQChr11g0339821 Helianthus annuus HOM05D005943 ORTHO05D007328 1.8e-41 172.9 154 63.0
MSTRG.4510 Avicennia marina HOM05D005943 ORTHO05D007328 3.1e-41 172.2 154 61.7
Ciclev10002634m.g Citrus clementina HOM05D005943 ORTHO05D007328 3.1e-41 172.2 154 61.7
Lj7A623G46 Lonicera japonica HOM05D005943 ORTHO05D007328 3.1e-41 172.2 151 62.9
Lalb_Chr11g0067091 Lupinus albus HOM05D005943 ORTHO05D007328 3.1e-41 172.2 154 61.7
HPP92_018258 Vanilla planifolia HOM05D005943 ORTHO05D007328 3.1e-41 172.2 154 61.0
Haze_04120 Corylus avellana HOM05D005943 ORTHO05D007328 4.0e-41 171.8 152 62.5
Os01g0314300 Oryza sativa ssp. japonica HOM05D005943 ORTHO05D007328 4.0e-41 171.8 154 61.7
CiPaw.07G023200 Carya illinoinensis HOM05D005943 ORTHO05D007328 6.9e-41 171.0 154 61.0
Ca_16733_v3 Cicer arietinum L. HOM05D005943 ORTHO05D007328 6.9e-41 171.0 154 61.7
Lalb_Chr23g0271691 Lupinus albus HOM05D005943 ORTHO05D007328 6.9e-41 171.0 154 61.0
Medtr3g091920 Medicago truncatula HOM05D005943 ORTHO05D007328 6.9e-41 171.0 153 62.1
Nitab4.5_0003497g0010 Nicotiana tabacum HOM05D005943 ORTHO05D007328 6.9e-41 171.0 153 62.1
unitig_0.g32 Utricularia gibba HOM05D005943 ORTHO05D007328 9.0e-41 170.6 154 61.0
ECA236G0332 Erigeron canadensis HOM05D005943 ORTHO05D007328 1.2e-40 170.2 154 61.7
TPR.G33656 Trifolium pratense HOM05D005943 ORTHO05D007328 1.2e-40 170.2 154 61.0
Cc02_g34350 Coffea canephora HOM05D005943 ORTHO05D007328 1.5e-40 169.9 154 60.4
Psat3g152320 Pisum sativum HOM05D005943 ORTHO05D007328 1.5e-40 169.9 154 61.0
Rhsim05G0137500 Rhododendron simsii HOM05D005943 ORTHO05D007328 2.6e-40 169.1 174 55.7
Sc06g0003910 Simmondsia chinensis HOM05D005943 ORTHO05D007328 2.6e-40 169.1 154 60.4
Lj1g0013041 Lotus japonicus HOM05D005943 ORTHO05D007328 4.5e-40 168.3 154 60.4
EL10Ac4g09897 Beta vulgaris HOM05D005943 ORTHO05D007328 5.8e-40 167.9 146 62.3
Glyma.04G232900 Glycine max HOM05D005943 ORTHO05D007328 5.8e-40 167.9 154 61.0
Glyma.06G132000 Glycine max HOM05D005943 ORTHO05D007328 5.8e-40 167.9 154 60.4
arahy.Tifrunner.gnm1.ann1.KZ6QJ9 Arachis hypogaea HOM05D005943 ORTHO05D007328 7.6e-40 167.5 153 60.1
Phvul.009G047900 Phaseolus vulgaris HOM05D005943 ORTHO05D007328 7.6e-40 167.5 154 60.4
Solyc01g099890.3 Solanum lycopersicum HOM05D005943 ORTHO05D007328 7.6e-40 167.5 154 61.0
Sopen01g043410 Solanum pennellii HOM05D005943 ORTHO05D007328 7.6e-40 167.5 154 61.0
Lsat_1_v5_gn_7_72860 Lactuca sativa HOM05D005943 ORTHO05D007328 9.9e-40 167.2 153 60.8
Hund07108 Selenicereus undatus HOM05D005943 ORTHO05D007328 9.9e-40 167.2 152 60.5
PGSC0003DMG400024722 Solanum tuberosum HOM05D005943 ORTHO05D007328 9.9e-40 167.2 152 61.8
DCAR_022176 Daucus carota HOM05D005943 ORTHO05D007328 2.2e-39 166.0 166 57.2
AagrBONN_evm.TU.Sc2ySwM_228.5507 Anthoceros agrestis HOM05D005943 ORTHO05D007328 2.9e-39 165.6 154 59.1
BcaC07g38477 Brassica carinata HOM05D005943 ORTHO05D007328 2.9e-39 165.6 155 60.0
Sed0012379 Sechium edule HOM05D005943 ORTHO05D007328 2.9e-39 165.6 154 59.1
Sed0027178 Sechium edule HOM05D005943 ORTHO05D007328 2.9e-39 165.6 154 59.1
AUR62005222 Chenopodium quinoa HOM05D005943 ORTHO05D007328 3.8e-39 165.2 154 59.1
THA.LOC104820740 Tarenaya hassleriana HOM05D005943 ORTHO05D007328 8.4e-39 164.1 152 61.2
AUR62000742 Chenopodium quinoa HOM05D005943 ORTHO05D007328 1.1e-38 163.7 152 59.2
THA.LOC104805894 Tarenaya hassleriana HOM05D005943 ORTHO05D007328 1.9e-38 162.9 154 59.1
Mapoly0028s0141 Marchantia polymorpha HOM05D005943 ORTHO05D007328 2.4e-38 162.5 154 58.4
C08p12460 Brassica napus HOM05D005943 ORTHO05D007328 3.2e-38 162.2 153 58.8
BolC8t48886H Brassica oleracea HOM05D005943 ORTHO05D007328 3.2e-38 162.2 152 59.2
Nitab4.5_0003113g0010 Nicotiana tabacum HOM05D005943 ORTHO05D007328 3.2e-38 162.2 146 64.4
C08p12470 Brassica napus HOM05D005943 ORTHO05D007328 4.2e-38 161.8 153 58.8
CARHR009020 Cardamine hirsuta HOM05D005943 ORTHO05D007328 7.1e-38 161.0 154 57.8
Sp1g07730 Schrenkiella parvula HOM05D005943 ORTHO05D007328 7.1e-38 161.0 154 57.8
AL1G19590 Arabidopsis lyrata HOM05D005943 ORTHO05D007328 1.2e-37 160.2 154 57.8
AT1G09150 Arabidopsis thaliana HOM05D005943 ORTHO05D007328 1.2e-37 160.2 154 57.8
Pp3c25_690 Physcomitrium patens HOM05D005943 ORTHO05D007328 1.2e-37 160.2 154 57.1
SGA_v2.0_scaffold42G16032 Striga asiatica HOM05D005943 ORTHO05D007328 2.1e-37 159.5 171 56.1
Aa31sc55G100 Aethionema arabicum HOM05D005943 ORTHO05D007328 2.7e-37 159.1 153 57.5
A08p34800 Brassica napus HOM05D005943 ORTHO05D007328 3.5e-37 158.7 153 57.5
BcaC05g24766 Brassica carinata HOM05D005943 ORTHO05D007328 4.6e-37 158.3 154 56.5
BraA06t23801Z Brassica rapa HOM05D005943 ORTHO05D007328 4.6e-37 158.3 154 56.5
Carub.0001s0844 Capsella rubella HOM05D005943 ORTHO05D007328 4.6e-37 158.3 154 56.5
Thhalv10008886m.g Eutrema salsugineum HOM05D005943 ORTHO05D007328 4.6e-37 158.3 154 56.5
A06p05940 Brassica napus HOM05D005943 ORTHO05D007328 6.0e-37 157.9 153 56.9
C05p07140 Brassica napus HOM05D005943 ORTHO05D007328 6.0e-37 157.9 153 56.9
Oeu048875.1 Olea europaea HOM05D005943 ORTHO05D007328 7.9e-37 157.5 163 55.2
vmacro19698 Vaccinium macrocarpon HOM05D005943 ORTHO05D007328 6.7e-36 154.5 85 87.1
Zm00001eb339860 Zea mays HOM05D005943 ORTHO05D007328 1.5e-35 153.3 85 87.1
Atru.chr6.2339 Acer truncatum HOM05D005943 ORTHO05D007328 1.9e-35 152.9 156 60.3
MD04G1083700 Malus domestica HOM05D005943 ORTHO05D007328 1.9e-35 152.9 182 53.3
Peaxi162Scf00037g01419 Petunia axillaris HOM05D005943 ORTHO05D007328 2.5e-35 152.5 152 59.9
FvH4_6g06770 Fragaria vesca HOM05D005943 ORTHO05D007328 3.3e-35 152.1 154 58.4
Duzib106G1343 Durio zibethinus HOM05D005943 ORTHO05D007328 5.6e-35 151.4 155 59.4
CDE09G0522 Ceratophyllum demersum HOM05D005943 ORTHO05D007328 3.7e-34 148.7 83 83.1
MBI18_g25341_MAGBIO Magnolia biondii HOM05D005943 ORTHO05D007328 6.2e-34 147.9 79 91.1
TAR362G1289 Trochodendron aralioides HOM05D005943 ORTHO05D007328 1.4e-33 146.7 79 89.9
arahy.Tifrunner.gnm1.ann1.2NZ4WG Arachis hypogaea HOM05D000716 ORTHO05D004822 9.0e-33 144.1 85 78.8
VMungo1309G2765 Vigna mungo HOM05D005943 ORTHO05D007328 2.6e-32 142.5 86 79.1
Eucgr.H03253 Eucalyptus grandis HOM05D005943 ORTHO05D007328 2.2e-31 139.4 79 87.3
SEGI_36457 Sequoiadendron giganteum HOM05D005943 ORTHO05D007328 2.2e-31 139.4 82 79.3
SMO169G0068 Selaginella moellendorffii HOM05D005943 ORTHO05D007328 4.9e-31 138.3 142 54.9
BraA08t35391Z Brassica rapa HOM05D005943 ORTHO05D007328 1.1e-30 137.1 85 76.5
FAN02G3650 Fragaria x ananassa HOM05D005943 ORTHO05D007328 1.4e-30 136.7 143 53.8
FAN09G2521 Fragaria x ananassa HOM05D005943 ORTHO05D007328 3.2e-30 135.6 134 56.7
Phvul.009G047833 Phaseolus vulgaris HOM05D005943 ORTHO05D007328 2.1e-29 132.9 79 81.0
SalBow1G5257 Salvia bowleyana HOM05D005943 ORTHO05D007328 1.0e-28 130.6 115 61.7
HPP92_018260 Vanilla planifolia HOM05D005943 ORTHO05D007328 1.9e-27 126.3 69 88.4
Eucgr.H03249 Eucalyptus grandis HOM05D005943 ORTHO05D007328 1.4e-25 120.2 66 90.9
Eucgr.H03239 Eucalyptus grandis HOM05D005943 ORTHO05D007328 1.5e-24 116.7 65 89.2
Haze_26177 Corylus avellana HOM05D005943 ORTHO05D007328 2.6e-24 115.9 155 41.3
PRCOL_00003880 Prasinoderma coloniale HOM05D005943 ORTHO05D007328 2.6e-24 115.9 156 44.9
MCO12G098 Micromonas commoda HOM05D005943 ORTHO05D007328 5.8e-24 114.8 144 45.1
CBR_g36436 Chara braunii HOM05D005943 ORTHO05D007328 1.0e-23 114.0 69 78.3
BcaC07g38474 Brassica carinata HOM05D005943 ORTHO05D007328 5.5e-22 108.2 66 78.8
Eucgr.H03245 Eucalyptus grandis HOM05D005943 ORTHO05D007328 1.5e-16 90.1 66 75.8
Cre50.g761397 Chlamydomonas reinhardtii HOM05D005943 ORTHO05D007328 2.0e-16 89.7 126 42.1
ClCG03G017220 Citrullus lanatus HOM05D001727 ORTHO05D001758 5.0e-15 85.1 46 89.1


User provided reference genes

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