Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.1e-295 1017.7 512 100.0
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 2.8e-219 765.4 512 75.4
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 2.2e-216 755.7 513 73.9
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 2.1e-214 749.2 512 73.0
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 2.2e-211 739.2 512 72.5
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 4.8e-211 738.0 526 71.7
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 2.9e-208 728.8 511 71.2
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 3.2e-207 725.3 512 72.3
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 3.6e-206 721.8 512 72.7
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 3.1e-202 708.8 512 70.5
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 4.1e-202 708.4 550 66.0
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 5.3e-202 708.0 512 71.3
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 5.3e-202 708.0 553 65.3
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 9.1e-202 707.2 513 71.0
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 5.9e-201 704.5 512 68.4
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.9e-200 702.2 512 69.5
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.1e-199 700.3 512 69.3
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 5.5e-199 698.0 512 66.4
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 3.6e-198 695.3 516 67.2
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 6.1e-198 694.5 512 67.8
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 8.0e-198 694.1 530 66.6
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 1.8e-197 693.0 512 67.0
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 4.0e-197 691.8 513 68.4
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 8.8e-197 690.6 523 67.7
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 8.8e-197 690.6 512 69.1
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.5e-196 689.9 512 67.6
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 1.5e-196 689.9 512 67.6
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 1.7e-195 686.4 512 68.4
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.8e-194 682.9 512 65.8
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 5.3e-194 681.4 512 66.0
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 1.6e-193 679.9 513 65.3
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 3.5e-193 678.7 512 65.6
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 5.9e-193 677.9 512 66.0
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 1.1e-191 673.7 518 64.5
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 7.2e-191 671.0 512 65.8
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 4.0e-189 665.2 512 63.5
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 8.8e-189 664.1 513 64.1
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.6e-188 662.5 512 64.8
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 2.6e-188 662.5 512 65.4
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 4.4e-188 661.8 513 65.9
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.3e-187 660.2 543 64.3
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 2.4e-186 656.0 512 64.1
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 2.4e-186 656.0 512 63.9
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 4.1e-186 655.2 512 65.2
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 4.1e-186 655.2 513 64.3
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 7.0e-186 654.4 512 65.4
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 5.9e-185 651.4 513 64.1
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 1.0e-184 650.6 513 63.9
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 2.2e-184 649.4 512 63.7
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 2.2e-184 649.4 514 63.2
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 3.8e-184 648.7 512 64.5
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 6.5e-184 647.9 522 65.5
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 1.5e-183 646.7 512 64.8
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 4.2e-183 645.2 512 63.3
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 3.6e-182 642.1 519 62.8
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 6.1e-182 641.3 515 63.1
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 5.2e-181 638.3 510 62.4
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 1.5e-180 636.7 427 75.6
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 5.7e-180 634.8 513 63.0
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 2.4e-178 629.4 507 61.9
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 5.4e-178 628.2 462 72.3
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 9.2e-178 627.5 512 63.3
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 3.5e-177 625.5 516 61.6
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 4.5e-177 625.2 516 61.8
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 1.7e-176 623.2 555 59.3
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 2.3e-176 622.9 516 60.7
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.0e-176 621.7 461 69.4
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 4.3e-175 618.6 514 60.5
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 2.1e-174 616.3 512 61.1
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 1.0e-173 614.0 513 61.6
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 3.0e-173 612.5 516 60.3
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 6.8e-173 611.3 517 60.9
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 6.8e-173 611.3 518 59.8
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 6.8e-173 611.3 497 62.6
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 1.5e-172 610.1 517 60.3
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 2.2e-171 606.3 522 60.2
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.8e-170 603.2 516 58.9
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 5.4e-170 601.7 512 61.7
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 7.0e-170 601.3 517 60.2
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 1.6e-169 600.1 487 62.8
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 2.0e-169 599.7 439 71.5
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 7.8e-169 597.8 515 59.0
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 1.3e-168 597.0 514 59.9
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 1.3e-168 597.0 514 59.9
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 1.7e-168 596.7 514 59.9
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 5.0e-168 595.1 592 55.1
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 5.6e-167 591.7 500 59.6
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 5.2e-165 585.1 512 57.4
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 9.8e-164 580.9 586 53.2
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 7.0e-162 574.7 532 58.3
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 1.2e-161 573.9 453 64.5
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 3.5e-161 572.4 515 57.7
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 1.7e-152 543.5 533 53.8
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 7.3e-151 538.1 512 56.1
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 5.8e-140 501.9 461 58.4
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 6.6e-136 488.4 341 73.3
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.8e-133 480.3 377 66.6
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 1.2e-132 477.6 469 52.5
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 1.9e-130 470.3 388 62.4
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 1.3e-128 464.2 520 47.5
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 1.9e-119 433.7 534 44.2
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.5e-111 406.8 379 59.6
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 2.5e-106 390.2 326 61.3
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 4.6e-105 386.0 387 53.5
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 2.3e-104 383.6 529 42.3
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 5.3e-101 372.5 431 49.9
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 3.9e-96 356.3 459 46.6
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.2e-89 334.7 186 90.3
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 1.2e-89 334.7 345 51.3
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 2.5e-82 310.5 323 52.6
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.6e-79 300.4 251 62.5
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 1.4e-77 294.7 434 43.1
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 1.8e-77 294.3 456 39.3
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 4.0e-72 276.6 196 71.9
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 2.0e-68 264.2 378 43.4
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 1.3e-59 235.0 545 31.7
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 2.3e-59 234.2 356 40.4
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.4e-56 224.9 131 88.5
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.4e-56 224.9 131 88.5
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 1.8e-48 198.0 135 71.9
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 4.4e-47 193.4 136 70.6
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 9.9e-39 165.6 200 47.5
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 2.9e-30 137.5 506 27.9
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 1.3e-27 128.6 223 39.5
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 2.1e-25 121.3 116 53.4
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.8e-25 120.9 65 87.7
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 3.4e-23 114.0 60 85.0
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.8e-22 110.5 57 89.5
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.6e-18 96.7 52 80.8
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 2.1e-17 94.7 61 62.3
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 4.0e-16 90.5 67 61.2
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 4.0e-16 90.5 67 61.2
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 9.9e-15 85.9 65 58.5
TAR636G1344 Trochodendron aralioides HOM05D005843 ORTHO05D415917 3.0e-11 74.3 43 83.7
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 1.1e-10 72.4 74 48.6


User provided reference genes

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