Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1738.0 869 100.0
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1348.2 876 78.0
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1286.9 874 74.9
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1269.6 853 74.6
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1256.9 879 73.5
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1256.5 898 74.1
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1255.0 876 72.1
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1247.3 871 73.5
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1245.7 875 72.2
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1245.3 879 73.2
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1241.1 872 72.1
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1240.3 817 76.1
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1238.8 872 73.6
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1238.4 884 73.2
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1233.8 873 73.0
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1229.2 818 75.2
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1223.4 875 70.2
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1218.0 873 70.9
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1213.7 842 73.4
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1211.8 915 67.9
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1200.7 875 70.3
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1198.7 880 68.3
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1198.7 819 72.3
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 0.0e+00 1196.4 888 70.2
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1196.4 876 68.6
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1193.7 877 68.4
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 0.0e+00 1191.4 920 66.7
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1189.5 818 71.6
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1187.2 876 69.3
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1185.2 874 69.2
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1184.9 882 67.5
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1179.1 873 67.4
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1176.4 875 70.2
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1176.4 761 76.3
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1173.3 842 71.0
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 0.0e+00 1169.5 821 72.4
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1168.3 873 67.8
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 0.0e+00 1159.8 887 69.9
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1159.8 876 68.3
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1157.1 877 68.4
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 0.0e+00 1155.6 839 71.0
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 0.0e+00 1154.4 814 69.2
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1153.7 874 65.4
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1153.3 867 69.0
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 0.0e+00 1153.3 959 63.5
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1151.7 877 65.5
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 0.0e+00 1146.0 887 65.4
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 0.0e+00 1144.4 871 65.6
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1142.1 864 65.9
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 0.0e+00 1141.7 907 66.3
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 0.0e+00 1137.5 827 68.4
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1135.6 822 69.0
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 0.0e+00 1134.4 838 68.7
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1134.0 927 62.0
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 0.0e+00 1134.0 873 65.6
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 0.0e+00 1127.9 870 66.2
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1125.5 864 66.6
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 0.0e+00 1117.1 820 68.0
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 0.0e+00 1115.9 802 71.1
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 0.0e+00 1114.0 882 66.1
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 0.0e+00 1113.2 892 63.1
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 0.0e+00 1113.2 885 63.3
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1110.5 817 66.2
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 0.0e+00 1108.2 887 62.8
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1107.0 817 66.0
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 0.0e+00 1105.1 695 79.4
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 0.0e+00 1102.8 884 62.9
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 0.0e+00 1102.0 886 62.9
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 0.0e+00 1100.5 814 67.2
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 0.0e+00 1097.8 884 62.6
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1097.8 873 63.5
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 0.0e+00 1095.9 837 66.8
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1094.0 873 62.8
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 0.0e+00 1094.0 873 62.8
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1093.2 885 62.0
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 0.0e+00 1092.0 879 61.9
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 0.0e+00 1092.0 869 66.5
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1088.2 875 62.7
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 0.0e+00 1088.2 841 66.3
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 0.0e+00 1083.9 909 64.9
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 0.0e+00 1077.4 819 64.5
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 2.0e-310 1068.9 885 63.1
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 5.5e-308 1060.8 878 62.6
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 2.1e-307 1058.9 863 63.8
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 3.5e-302 1041.6 834 62.6
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 2.1e-299 1032.3 874 63.3
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 1.8e-298 1029.2 806 62.4
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 4.8e-296 1021.1 761 68.7
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 2.2e-293 1012.3 641 76.4
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 4.2e-292 1008.1 738 66.0
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 1.6e-291 1006.1 709 71.1
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 9.4e-284 980.3 700 70.0
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 2.1e-283 979.2 895 57.2
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 1.7e-280 969.5 785 65.7
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 7.8e-270 934.1 666 70.6
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 6.8e-250 867.8 743 60.7
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 1.6e-246 856.7 848 51.1
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 7.3e-244 847.8 854 50.5
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 6.4e-240 834.7 844 51.3
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 1.1e-220 770.8 741 52.0
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 3.9e-213 745.7 806 52.2
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 2.5e-204 716.5 505 72.3
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 2.7e-190 669.8 566 54.8
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 4.0e-181 639.4 480 67.3
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 7.7e-169 598.6 545 57.8
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 8.9e-157 558.5 806 39.8
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 1.5e-148 531.2 761 39.0
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 7.3e-127 459.1 401 57.1
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.6e-126 458.0 298 75.2
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 5.6e-119 433.0 297 72.4
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 2.1e-110 404.4 398 56.3
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 8.7e-96 355.9 197 82.7
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.5e-95 355.1 188 86.2
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 9.6e-95 352.4 186 86.6
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 4.8e-94 350.1 248 69.8
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 1.3e-91 342.0 244 66.8
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 2.7e-81 307.8 217 70.0
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 1.4e-77 295.4 416 36.8
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 9.4e-66 256.1 201 57.7
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 2.8e-46 191.4 147 59.2
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 5.7e-39 167.2 144 50.0
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 4.1e-37 161.0 244 48.0
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 3.2e-29 134.8 159 45.3
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 6.2e-17 94.0 94 59.6
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 1.2e-12 79.7 107 43.9
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.5e-10 72.8 53 71.7
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 7.6e-07 60.5 192 28.1
Actinidia04126 Actinidia chinensis HOM05D005937 ORTHO05D019459 4.9e-06 57.8 73 47.9


User provided reference genes

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