Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1503 Trochodendron aralioides HOM05D007342 ORTHO05D009252 9.8e-104 380.2 198 100.0
Nn4g25834 Nelumbo nucifera HOM05D007342 ORTHO05D009252 3.2e-38 162.5 214 51.4
Aqoxy5G00727 Aquilegia oxysepala HOM05D007342 ORTHO05D009252 1.0e-20 104.4 197 41.6
Dinv29744 Davidia involucrata HOM05D007342 ORTHO05D009252 1.8e-20 103.6 186 41.4
PSO210G2737 Papaver somniferum HOM05D007342 ORTHO05D009252 9.8e-19 97.8 176 41.5
GSVIVG01017735001 Vitis vinifera HOM05D007342 ORTHO05D009252 4.5e-16 89.0 188 39.9
Cpa.g.sc16.174 Carica papaya HOM05D007342 ORTHO05D009252 5.9e-16 88.6 187 35.8
Actinidia00019 Actinidia chinensis HOM05D007342 ORTHO05D009252 1.2e-13 80.9 209 37.8
PGR031G1889 Punica granatum HOM05D007342 ORTHO05D009252 1.6e-13 80.5 207 34.8
Sabra08G0152900 Salix brachista HOM05D007342 ORTHO05D009252 1.6e-13 80.5 159 39.0
CSS0019788 Camellia sinensis var. sinensis HOM05D007342 ORTHO05D009252 2.1e-13 80.1 190 34.2
Potri.008G222000 Populus trichocarpa HOM05D007342 ORTHO05D009252 4.7e-13 79.0 164 39.0
QL06p008994 Quercus lobata HOM05D007342 ORTHO05D009252 1.0e-12 77.8 135 37.8
Actinidia14301 Actinidia chinensis HOM05D007342 ORTHO05D009252 8.8e-12 74.7 189 36.0
Cc03_g01870 Coffea canephora HOM05D007342 ORTHO05D009252 1.5e-11 73.9 158 36.7
COL.COLO4_13866 Corchorus olitorius HOM05D007342 ORTHO05D009252 2.6e-11 73.2 193 32.6
Rhsim02G0008900 Rhododendron simsii HOM05D007342 ORTHO05D009252 9.8e-11 71.2 206 34.0
Sc19g0005330 Simmondsia chinensis HOM05D007342 ORTHO05D009252 1.3e-10 70.9 192 34.9
Cfa015389 Carpinus fangiana HOM05D007342 ORTHO05D009252 1.7e-10 70.5 180 33.9
Solyc01g080760.4 Solanum lycopersicum HOM05D007342 ORTHO05D009252 2.2e-10 70.1 211 30.8
Haze_01197 Corylus avellana HOM05D007342 ORTHO05D009252 1.4e-09 67.4 172 32.6
Duzib212G0754 Durio zibethinus HOM05D007342 ORTHO05D009252 1.4e-09 67.4 145 34.5
Sopen01g030760 Solanum pennellii HOM05D007342 ORTHO05D009252 1.4e-09 67.4 209 32.1
THA.LOC104820266 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 4.1e-09 65.9 176 34.1
TWI53G0473 Tripterygium wilfordii HOM05D007342 ORTHO05D009252 9.2e-09 64.7 168 31.5
Gorai.006G262500 Gossypium raimondii HOM05D007342 ORTHO05D009252 1.2e-08 64.3 190 34.2
Manes.03G195600 Manihot esculenta HOM05D007342 ORTHO05D009252 1.6e-08 63.9 191 35.1
MSTRG.10096 Avicennia marina HOM05D007342 ORTHO05D009252 2.7e-08 63.2 179 32.4
Eucgr.B01323 Eucalyptus grandis HOM05D007342 ORTHO05D009252 2.7e-08 63.2 162 28.4
Thecc.04G285100 Theobroma cacao HOM05D007342 ORTHO05D009252 4.5e-08 62.4 161 34.8
Prupe.1G135700 Prunus persica HOM05D007342 ORTHO05D009252 5.9e-08 62.0 166 28.9
Hund19378 Selenicereus undatus HOM05D007342 ORTHO05D009252 5.9e-08 62.0 171 34.5
Eucgr.L03117 Eucalyptus grandis HOM05D007342 ORTHO05D009252 2.3e-07 60.1 159 31.4
Gohir.A09G238800 Gossypium hirsutum HOM05D007342 ORTHO05D009252 2.3e-07 60.1 190 31.1
RcHm_v2.0_Chr4g0422351 Rosa chinensis HOM05D007342 ORTHO05D009252 2.3e-07 60.1 156 35.3
ATR0796G152 Amborella trichopoda HOM05D007342 ORTHO05D009252 2.9e-07 59.7 176 37.5
Ciclev10004639m.g Citrus clementina HOM05D007342 ORTHO05D009252 5.0e-07 58.9 204 32.4
MD13G1168100 Malus domestica HOM05D007342 ORTHO05D009252 5.0e-07 58.9 170 27.6
Peaxi162Scf01123g00234 Petunia axillaris HOM05D007342 ORTHO05D009252 5.0e-07 58.9 158 33.5
CANSAT78G2360 Cannabis sativa HOM05D007342 ORTHO05D009252 6.6e-07 58.5 192 29.7
AL7G39470 Arabidopsis lyrata HOM05D007342 ORTHO05D009252 8.6e-07 58.2 156 30.1
PGSC0003DMG400006281 Solanum tuberosum HOM05D007342 ORTHO05D009252 1.5e-06 57.4 196 28.1
Migut.G00157 Erythranthe guttata HOM05D007342 ORTHO05D009252 1.9e-06 57.0 156 32.1
FAN17G1678 Fragaria x ananassa HOM05D007342 ORTHO05D009252 4.3e-06 55.8 147 36.1
Nitab4.5_0000191g0200 Nicotiana tabacum HOM05D007342 ORTHO05D009252 4.3e-06 55.8 213 28.2
TPR.G3194 Trifolium pratense HOM05D007342 ORTHO05D009252 4.3e-06 55.8 161 32.3
AUR62028039 Chenopodium quinoa HOM05D007342 ORTHO05D009252 7.3e-06 55.1 145 35.2
Medtr4g119920 Medicago truncatula HOM05D007342 ORTHO05D009252 7.3e-06 55.1 177 31.6
SGA_v2.0_scaffold67G22631 Striga asiatica HOM05D007342 ORTHO05D009252 7.3e-06 55.1 195 30.3


User provided reference genes

Program Settings