Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 1.2e-211 739.6 368 100.0
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 1.1e-132 477.2 318 70.8
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 9.3e-132 474.2 322 71.7
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 2.9e-125 452.6 325 67.4
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 3.2e-124 449.1 301 70.1
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 3.2e-124 449.1 319 64.9
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 4.2e-124 448.7 306 69.3
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 2.1e-123 446.4 347 62.5
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 3.5e-123 445.7 330 65.2
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 3.0e-122 442.6 313 64.9
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 1.1e-121 440.7 351 61.8
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 1.1e-121 440.7 332 63.9
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 1.9e-121 439.9 314 64.6
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 4.3e-121 438.7 301 66.8
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 7.4e-121 438.0 312 66.3
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.1e-119 434.1 341 62.5
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 1.4e-119 433.7 335 62.4
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 5.3e-119 431.8 328 64.0
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 9.0e-119 431.0 356 59.8
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 4.5e-118 428.7 334 60.5
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 4.5e-118 428.7 302 66.9
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 2.2e-117 426.4 299 68.6
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 2.2e-117 426.4 348 62.4
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 3.8e-117 425.6 333 63.1
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 8.5e-117 424.5 326 62.6
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 9.4e-116 421.0 334 62.0
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 4.6e-115 418.7 327 60.6
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 8.8e-114 414.5 328 61.6
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 4.3e-113 412.1 308 62.0
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 1.7e-112 410.2 332 60.2
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 1.7e-112 410.2 301 63.1
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 4.8e-112 408.7 318 59.7
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 4.8e-112 408.7 301 63.8
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 6.3e-112 408.3 301 63.1
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 6.3e-112 408.3 283 68.9
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 8.2e-112 407.9 353 56.9
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 8.2e-112 407.9 339 59.9
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 1.4e-111 407.1 351 55.8
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 6.9e-111 404.8 323 61.6
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 6.9e-111 404.8 305 64.6
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 2.0e-110 403.3 338 59.8
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 2.6e-110 402.9 307 60.3
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 4.5e-110 402.1 283 65.0
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.9e-110 401.7 301 63.1
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 1.0e-109 401.0 322 60.6
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 1.3e-109 400.6 322 58.7
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 2.2e-109 399.8 303 60.7
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 3.8e-109 399.1 309 62.5
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 5.0e-109 398.7 294 61.6
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 5.0e-109 398.7 308 59.1
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 5.0e-109 398.7 331 55.3
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 1.1e-108 397.5 307 60.9
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 1.9e-108 396.7 295 61.7
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 4.2e-108 395.6 295 61.4
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 7.2e-108 394.8 328 57.9
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 2.1e-107 393.3 326 57.7
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 4.7e-107 392.1 304 61.5
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 2.3e-106 389.8 284 62.3
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 5.1e-106 388.7 311 58.5
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 1.5e-105 387.1 302 61.6
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 9.7e-105 384.4 349 55.6
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 2.8e-104 382.9 359 54.3
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 2.4e-103 379.8 299 57.9
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 2.2e-101 373.2 340 55.0
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 1.9e-100 370.2 282 60.3
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 7.2e-100 368.2 431 46.9
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 1.6e-99 367.1 317 56.5
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 1.4e-98 364.0 280 62.5
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 3.3e-97 359.4 279 62.0
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 2.2e-96 356.7 303 58.4
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 3.7e-96 355.9 287 56.1
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 1.4e-95 354.0 467 42.8
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 1.2e-94 350.9 282 56.7
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 7.7e-94 348.2 262 59.5
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 1.0e-90 337.8 309 51.1
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 4.0e-90 335.9 242 64.9
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 5.7e-89 332.0 340 50.9
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 7.5e-89 331.6 239 65.7
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 2.8e-88 329.7 259 61.0
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 1.1e-87 327.8 340 51.8
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 1.2e-86 324.3 335 46.9
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 9.4e-84 314.7 234 62.4
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.6e-83 313.9 249 59.4
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 2.7e-83 313.2 230 66.5
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 1.0e-82 311.2 283 52.3
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 3.0e-82 309.7 235 61.3
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 4.8e-80 302.4 339 50.4
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 2.9e-77 293.1 323 48.3
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 3.8e-77 292.7 202 68.8
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 4.4e-73 279.3 281 48.0
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 1.8e-71 273.9 209 63.6
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 5.4e-71 272.3 210 60.5
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 2.8e-67 260.0 311 43.1
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 3.4e-57 226.5 174 62.1
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 1.1e-55 221.5 145 69.7
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 5.4e-55 219.2 192 57.3
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 3.5e-54 216.5 192 57.8
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 1.3e-53 214.5 327 41.6
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 1.6e-51 207.6 144 66.7
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 8.1e-51 205.3 319 37.6
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 5.8e-49 199.1 304 37.5
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 1.3e-48 198.0 440 34.1
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 6.0e-46 189.1 145 59.3
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 5.6e-44 182.6 182 46.2
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 1.8e-42 177.6 128 62.5
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 7.6e-41 172.2 173 50.9
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.7e-40 171.0 104 72.1
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 4.9e-32 142.9 99 62.6
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 2.4e-31 140.6 95 69.5
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 4.2e-31 139.8 88 67.0
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 4.6e-30 136.3 232 40.5
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 5.3e-26 122.9 76 69.7
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 6.9e-26 122.5 86 60.5
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 1.7e-24 117.9 291 27.1
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 7.1e-23 112.5 333 27.6
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 2.8e-19 100.5 69 63.8
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 2.4e-18 97.4 302 26.8
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 3.4e-09 67.0 43 67.4
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 5.8e-09 66.2 44 68.2
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 1.3e-08 65.1 47 68.1
Hund19874 Selenicereus undatus HOM05D006689 ORTHO05D008349 8.4e-08 62.4 43 65.1
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 3.2e-07 60.5 52 51.9
Ca_12392_v3 Cicer arietinum L. HOM05D000112 ORTHO05D023238 3.2e-07 60.5 49 63.3


User provided reference genes

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