Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1446 Trochodendron aralioides HOM05D007104 ORTHO05D008851 0.0e+00 1458.4 860 100.0
Nn2g12960 Nelumbo nucifera HOM05D007104 ORTHO05D008851 3.8e-269 931.8 859 71.0
GSVIVG01025541001 Vitis vinifera HOM05D007104 ORTHO05D008851 1.6e-251 873.2 858 67.9
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 4.0e-234 815.5 815 67.9
Thecc.05G052200 Theobroma cacao HOM05D007104 ORTHO05D008851 2.3e-226 789.6 848 65.7
Dinv35696 Davidia involucrata HOM05D007104 ORTHO05D008851 3.1e-226 789.3 860 65.0
Duzib128G0648 Durio zibethinus HOM05D007104 ORTHO05D008851 3.2e-223 779.2 851 64.2
Manes.08G001800 Manihot esculenta HOM05D007104 ORTHO05D008851 1.2e-214 750.7 861 62.5
CiPaw.09G181900 Carya illinoinensis HOM05D007104 ORTHO05D008851 7.8e-214 748.0 858 62.6
Gorai.009G420800 Gossypium raimondii HOM05D007104 ORTHO05D008851 1.7e-213 746.9 843 62.9
RcHm_v2.0_Chr3g0468421 Rosa chinensis HOM05D007104 ORTHO05D008851 1.7e-213 746.9 858 61.1
Gohir.A04G077100 Gossypium hirsutum HOM05D007104 ORTHO05D008851 5.6e-212 741.9 835 62.8
Ciclev10011055m.g Citrus clementina HOM05D007104 ORTHO05D008851 1.6e-211 740.3 864 61.2
PSO339G1446 Papaver somniferum HOM05D007104 ORTHO05D008851 2.1e-211 740.0 880 62.3
MD12G1126500 Malus domestica HOM05D007104 ORTHO05D008851 3.6e-211 739.2 871 60.5
Actinidia05278 Actinidia chinensis HOM05D007104 ORTHO05D008851 1.1e-210 737.6 860 62.4
FAN05G0960 Fragaria x ananassa HOM05D007104 ORTHO05D008851 2.3e-210 736.5 858 60.3
PSO384G2670 Papaver somniferum HOM05D007104 ORTHO05D008851 1.3e-208 730.7 879 62.5
FAN14G4814 Fragaria x ananassa HOM05D007104 ORTHO05D008851 3.8e-208 729.2 862 60.1
Haze_20670 Corylus avellana HOM05D007104 ORTHO05D008851 3.2e-207 726.1 863 61.8
FvH4_6g15120 Fragaria vesca HOM05D007104 ORTHO05D008851 2.5e-204 716.5 859 59.7
Potri.006G132700 Populus trichocarpa HOM05D007104 ORTHO05D008851 3.3e-204 716.1 866 60.2
MBI05_g33311_MAGBIO Magnolia biondii HOM05D007104 ORTHO05D008851 8.1e-203 711.4 870 62.1
Sabra06G0104200 Salix brachista HOM05D007104 ORTHO05D008851 4.4e-201 705.7 865 58.7
Cfa017487 Carpinus fangiana HOM05D007104 ORTHO05D008851 2.9e-200 703.0 824 61.5
Peaxi162Scf00005g05111 Petunia axillaris HOM05D007104 ORTHO05D008851 3.8e-200 702.6 820 61.8
EL10Ac7g17325 Beta vulgaris HOM05D007104 ORTHO05D008851 1.4e-199 700.7 794 56.3
Prupe.6G243100 Prunus persica HOM05D007104 ORTHO05D008851 2.1e-198 696.8 854 59.8
CSS0009185 Camellia sinensis var. sinensis HOM05D007104 ORTHO05D008851 7.8e-198 694.9 805 62.6
QL07p045556 Quercus lobata HOM05D007104 ORTHO05D008851 1.1e-196 691.0 874 59.4
Sed0027238 Sechium edule HOM05D007104 ORTHO05D008851 1.2e-193 681.0 861 58.7
Nitab4.5_0006316g0040 Nicotiana tabacum HOM05D007104 ORTHO05D008851 9.9e-193 677.9 855 58.5
COL.COLO4_27102 Corchorus olitorius HOM05D007104 ORTHO05D008851 4.2e-191 672.5 698 68.3
FAN09G1206 Fragaria x ananassa HOM05D007104 ORTHO05D008851 4.2e-191 672.5 866 57.4
HanXRQChr05g0129241 Helianthus annuus HOM05D007104 ORTHO05D008851 4.2e-191 672.5 812 60.1
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 7.1e-191 671.8 751 62.7
MSTRG.19128 Avicennia marina HOM05D007104 ORTHO05D008851 9.3e-191 671.4 830 60.2
PGR004G2266 Punica granatum HOM05D007104 ORTHO05D008851 9.3e-191 671.4 803 59.4
Cc06_g03420 Coffea canephora HOM05D007104 ORTHO05D008851 3.5e-190 669.5 860 59.2
DCAR_017721 Daucus carota HOM05D007104 ORTHO05D008851 4.6e-190 669.1 856 58.8
ATR0594G196 Amborella trichopoda HOM05D007104 ORTHO05D008851 1.6e-187 660.6 866 55.7
Lsat_1_v5_gn_2_109900 Lactuca sativa HOM05D007104 ORTHO05D008851 1.8e-186 657.1 817 59.1
AUR62040527 Chenopodium quinoa HOM05D007104 ORTHO05D008851 2.4e-186 656.8 836 53.6
Gohir.D04G116200 Gossypium hirsutum HOM05D007104 ORTHO05D008851 5.3e-186 655.6 719 65.1
Sopen09g002070 Solanum pennellii HOM05D007104 ORTHO05D008851 5.3e-186 655.6 855 57.5
BcaC06g32013 Brassica carinata HOM05D007104 ORTHO05D008851 2.0e-185 653.7 865 56.8
Solyc09g007200.4 Solanum lycopersicum HOM05D007104 ORTHO05D008851 2.0e-185 653.7 855 57.4
Lj1g0014647 Lotus japonicus HOM05D007104 ORTHO05D008851 2.6e-185 653.3 819 58.4
Migut.J00404 Erythranthe guttata HOM05D007104 ORTHO05D008851 3.4e-185 652.9 853 57.4
Sp6g39750 Schrenkiella parvula HOM05D007104 ORTHO05D008851 5.8e-185 652.1 864 56.6
A10p32890 Brassica napus HOM05D007104 ORTHO05D008851 7.6e-185 651.7 842 57.8
BraA10t45326Z Brassica rapa HOM05D007104 ORTHO05D008851 7.6e-185 651.7 842 57.8
C09p73820 Brassica napus HOM05D007104 ORTHO05D008851 2.9e-184 649.8 846 57.2
BolC9t60116H Brassica oleracea HOM05D007104 ORTHO05D008851 2.9e-184 649.8 846 57.2
SalBow3G1198 Salvia bowleyana HOM05D007104 ORTHO05D008851 4.9e-184 649.0 832 52.4
Glyma.19G177700 Glycine max HOM05D007104 ORTHO05D008851 6.4e-184 648.7 855 57.8
Nitab4.5_0000848g0180 Nicotiana tabacum HOM05D007104 ORTHO05D008851 8.4e-184 648.3 855 51.6
vmacro08689 Vaccinium macrocarpon HOM05D007104 ORTHO05D008851 2.4e-183 646.7 860 57.2
AT5G02830 Arabidopsis thaliana HOM05D007104 ORTHO05D008851 4.2e-183 646.0 875 56.2
Carub.0006s0163 Capsella rubella HOM05D007104 ORTHO05D008851 4.2e-183 646.0 862 56.7
AL6G12100 Arabidopsis lyrata HOM05D007104 ORTHO05D008851 5.5e-183 645.6 853 56.9
TWI18G0316 Tripterygium wilfordii HOM05D007104 ORTHO05D008851 6.0e-182 642.1 837 58.2
Thhalv10012661m.g Eutrema salsugineum HOM05D007104 ORTHO05D008851 8.7e-181 638.3 871 50.5
CANSAT80G1630 Cannabis sativa HOM05D007104 ORTHO05D008851 4.3e-180 636.0 867 56.3
Hund12063 Selenicereus undatus HOM05D007104 ORTHO05D008851 3.7e-179 632.9 879 50.3
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 4.8e-179 632.5 857 52.7
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea HOM05D007104 ORTHO05D008851 9.0e-178 628.2 790 51.8
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea HOM05D007104 ORTHO05D008851 9.0e-178 628.2 790 51.8
CsaV3_4G024380 Cucumis sativus L. HOM05D007104 ORTHO05D008851 1.5e-177 627.5 864 56.6
Lj3C977G16 Lonicera japonica HOM05D007104 ORTHO05D008851 3.4e-177 626.3 873 54.6
Phvul.001G174000 Phaseolus vulgaris HOM05D007104 ORTHO05D008851 3.2e-175 619.8 815 57.2
Ca_08818_v3 Cicer arietinum L. HOM05D007104 ORTHO05D008851 1.2e-174 617.8 857 54.4
Lalb_Chr20g0112911 Lupinus albus HOM05D007104 ORTHO05D008851 7.9e-174 615.1 761 59.1
CAN.G350.45 Capsicum annuum HOM05D007104 ORTHO05D008851 1.3e-173 614.4 774 59.7
Medtr7g100550 Medicago truncatula HOM05D007104 ORTHO05D008851 1.3e-173 614.4 814 57.2
MELO3C003069.2 Cucumis melo HOM05D007104 ORTHO05D008851 1.8e-173 614.0 876 47.9
THA.LOC104826989 Tarenaya hassleriana HOM05D007104 ORTHO05D008851 3.0e-173 613.2 791 59.3
Aa31LG1G22070 Aethionema arabicum HOM05D007104 ORTHO05D008851 3.9e-173 612.8 868 48.8
ClCG04G008780 Citrullus lanatus HOM05D007104 ORTHO05D008851 3.9e-173 612.8 863 54.9
TPR.G36926 Trifolium pratense HOM05D007104 ORTHO05D008851 6.7e-173 612.1 746 58.6
Psat3g045920 Pisum sativum HOM05D007104 ORTHO05D008851 1.9e-167 594.0 749 59.3
SGA_v2.0_scaffold126G33879 Striga asiatica HOM05D007104 ORTHO05D008851 1.7e-160 570.9 856 54.7
VMungo1383G0332 Vigna mungo HOM05D007104 ORTHO05D008851 5.0e-160 569.3 778 55.7
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 1.1e-154 551.6 798 46.1
HPP92_003603 Vanilla planifolia HOM05D007104 ORTHO05D008851 9.4e-151 538.5 744 55.4
Os03g0284900 Oryza sativa ssp. japonica HOM05D007104 ORTHO05D008851 2.3e-141 507.3 812 43.7
Eucgr.K03203 Eucalyptus grandis HOM05D007104 ORTHO05D008851 6.1e-134 482.6 597 65.0
SEGI_02163 Sequoiadendron giganteum HOM05D007104 ORTHO05D008851 1.3e-128 464.9 827 47.4
Aqoxy2G01885 Aquilegia oxysepala HOM05D007104 ORTHO05D008851 3.1e-122 443.7 536 58.6
Glyma.03G177000 Glycine max HOM05D007104 ORTHO05D008851 3.1e-109 400.6 530 64.2
Zm00001eb397200 Zea mays HOM05D007104 ORTHO05D008851 7.3e-95 352.8 667 35.5
Pp3c22_3070 Physcomitrium patens HOM05D007104 ORTHO05D008851 1.5e-87 328.6 807 43.0
Cpa.g.sc45.26 Carica papaya HOM05D007104 ORTHO05D008851 3.3e-87 327.4 539 58.4
Oeu034822.1 Olea europaea HOM05D007104 ORTHO05D008851 4.0e-85 320.5 377 61.5
Atru.chr8.2537 Acer truncatum HOM05D007104 ORTHO05D008851 3.9e-80 303.9 412 63.6
Pp3c21_12360 Physcomitrium patens HOM05D007104 ORTHO05D008851 6.2e-78 296.6 844 40.4
Mapoly0039s0098 Marchantia polymorpha HOM05D007104 ORTHO05D008851 3.2e-74 284.3 840 39.6
Atru.chr8.2538 Acer truncatum HOM05D007104 ORTHO05D008851 6.2e-70 270.0 289 50.2
SMO351G0222 Selaginella moellendorffii HOM05D007104 ORTHO05D008851 8.2e-54 216.5 508 36.6
CARHR210500 Cardamine hirsuta HOM05D007104 ORTHO05D008851 5.0e-51 207.2 226 51.8
CDE02G1389 Ceratophyllum demersum HOM05D007104 ORTHO05D008851 4.6e-49 200.7 315 55.9
unitig_16.g32855 Utricularia gibba HOM05D007104 ORTHO05D008851 1.4e-45 189.1 228 50.0
Oeu027653.1 Olea europaea HOM05D007104 ORTHO05D008851 8.0e-33 146.7 162 48.8
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla HOM05D007104 ORTHO05D008851 1.4e-32 146.0 136 55.9
Rhsim04G0181000 Rhododendron simsii HOM05D007104 ORTHO05D008851 3.1e-21 108.2 106 51.9
Pp3c22_3080 Physcomitrium patens HOM05D007104 ORTHO05D008851 2.7e-20 105.1 168 39.3
RcHm_v2.0_Chr3g0468351 Rosa chinensis HOM05D007104 ORTHO05D008851 9.1e-13 80.1 77 51.9
CBR_g39241 Chara braunii HOM05D007104 ORTHO05D008851 4.2e-10 71.2 172 54.7
PRCOL_00006441 Prasinoderma coloniale HOM05D007104 ORTHO05D008851 3.6e-09 68.2 195 26.7
AagrBONN_evm.TU.Sc2ySwM_368.1398 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.4e-07 61.2 241 22.4
Phvul.006G093100 Phaseolus vulgaris HOM05D000001 ORTHO05D000003 1.3e-06 59.7 139 31.7
Nn1g01467 Nelumbo nucifera HOM05D007104 ORTHO05D008851 1.7e-06 59.3 46 67.4
PSO063G0176 Papaver somniferum HOM05D007251 ORTHO05D009266 1.7e-06 59.3 108 37.0
PSO782G5553 Papaver somniferum HOM05D007251 ORTHO05D009266 1.7e-06 59.3 108 37.0
CiPaw.08G020100 Carya illinoinensis HOM05D007251 ORTHO05D009266 2.2e-06 58.9 117 35.0
AL6G21210 Arabidopsis lyrata HOM05D007251 ORTHO05D009266 8.3e-06 57.0 199 25.1


User provided reference genes

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