Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1440 Trochodendron aralioides HOM05D009231 ORTHO05D010800 3.2e-150 535.0 263 100.0
TAR636G0160 Trochodendron aralioides HOM05D009231 ORTHO05D010800 9.1e-89 330.9 265 66.4
Nn6g34706 Nelumbo nucifera HOM05D009231 ORTHO05D010800 3.7e-58 229.2 236 54.2
Nn2g14291 Nelumbo nucifera HOM05D009231 ORTHO05D010800 1.1e-54 217.6 227 55.1
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 2.9e-34 149.8 295 39.0
Cfa021528 Carpinus fangiana HOM05D009231 ORTHO05D010800 1.1e-30 137.9 272 37.1
Haze_07057 Corylus avellana HOM05D009231 ORTHO05D010800 3.6e-29 132.9 293 36.5
Hma1.2p1_0079F.1_g041880 Hydrangea macrophylla HOM05D009231 ORTHO05D010800 6.9e-28 128.6 299 36.5
Duzib093G0513 Durio zibethinus HOM05D009231 ORTHO05D010800 1.3e-26 124.4 285 36.8
Thecc.05G103300 Theobroma cacao HOM05D009231 ORTHO05D010800 2.9e-26 123.2 286 35.7
Actinidia32045 Actinidia chinensis HOM05D009231 ORTHO05D010800 3.8e-26 122.9 287 35.5
Dinv31754 Davidia involucrata HOM05D009231 ORTHO05D010800 6.4e-26 122.1 211 41.2
Manes.08G032900 Manihot esculenta HOM05D009231 ORTHO05D010800 2.4e-25 120.2 278 35.3
Gohir.A01G201800 Gossypium hirsutum HOM05D009231 ORTHO05D010800 3.2e-25 119.8 272 36.0
Aqoxy1G00673 Aquilegia oxysepala HOM05D009231 ORTHO05D010800 1.2e-24 117.9 297 35.7
Gorai.002G235600 Gossypium raimondii HOM05D009231 ORTHO05D010800 1.6e-24 117.5 272 35.7
QL07p036848 Quercus lobata HOM05D009231 ORTHO05D010800 1.3e-23 114.4 290 35.5
Manes.09G044800 Manihot esculenta HOM05D009231 ORTHO05D010800 3.0e-23 113.2 286 33.9
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 1.5e-22 110.9 294 33.0
Actinidia03894 Actinidia chinensis HOM05D009231 ORTHO05D010800 5.6e-22 109.0 281 35.2
Cpa.g.sc104.38 Carica papaya HOM05D009231 ORTHO05D010800 1.3e-21 107.8 301 32.9
Prupe.7G095600 Prunus persica HOM05D015804 ORTHO05D010800 4.8e-21 105.9 274 32.8
ATR0772G209 Amborella trichopoda HOM05D009231 ORTHO05D010800 5.3e-20 102.4 288 35.1
RcHm_v2.0_Chr3g0475841 Rosa chinensis HOM05D015804 ORTHO05D010800 1.3e-18 97.8 281 33.1
Gohir.D01G191700 Gossypium hirsutum HOM05D009231 ORTHO05D010800 2.9e-18 96.7 222 36.5
FAN14G2856 Fragaria x ananassa HOM05D015804 ORTHO05D010800 4.2e-17 92.8 278 34.2
FvH4_6g20250 Fragaria vesca HOM05D015804 ORTHO05D010800 1.6e-16 90.9 277 33.6
CDE08G0923 Ceratophyllum demersum HOM05D009231 ORTHO05D010800 2.1e-16 90.5 267 31.5
COL.COLO4_29583 Corchorus olitorius HOM05D009231 ORTHO05D010800 2.3e-15 87.0 195 38.5
FAN05G3991 Fragaria x ananassa HOM05D015804 ORTHO05D010800 4.3e-14 82.8 280 32.9
PGR142G1154 Punica granatum HOM05D009231 ORTHO05D010800 2.8e-13 80.1 288 32.3
FAN02G3496 Fragaria x ananassa HOM05D015804 ORTHO05D010800 3.1e-12 76.6 274 30.3
HPP92_023078 Vanilla planifolia HOM05D009231 ORTHO05D010800 4.0e-12 76.3 279 30.1
Potri.006G203800 Populus trichocarpa HOM05D009231 ORTHO05D010800 6.9e-12 75.5 112 46.4
Oeu052622.2 Olea europaea HOM05D022101 ORTHO05D022209 1.5e-11 74.3 215 33.5
PSO339G1113 Papaver somniferum HOM05D027017 ORTHO05D010800 1.5e-11 74.3 251 31.5
PSO384G1383 Papaver somniferum HOM05D027017 ORTHO05D010800 2.0e-11 73.9 251 31.5
Sc20g0006710 Simmondsia chinensis HOM05D009231 ORTHO05D010800 2.0e-11 73.9 273 30.4
Duzib106G2060 Durio zibethinus HOM05D009231 ORTHO05D010800 2.6e-11 73.6 147 35.4
FAN05G1852 Fragaria x ananassa HOM05D015804 ORTHO05D010800 2.6e-11 73.6 281 30.6
MD12G1039600 Malus domestica HOM05D015804 ORTHO05D010800 2.9e-10 70.1 243 33.7
FAN09G0232 Fragaria x ananassa HOM05D015804 ORTHO05D010800 8.4e-10 68.6 274 29.9
Hund03818 Selenicereus undatus HOM05D009231 ORTHO05D010800 1.4e-09 67.8 277 27.1
Ah.08g210080 Amaranthus hybridus HOM05D009231 ORTHO05D010800 2.7e-08 63.5 284 28.9
PSO339G3628 Papaver somniferum HOM05D027017 ORTHO05D010800 3.5e-08 63.2 246 28.0
Dinv08588 Davidia involucrata HOM05D030328 ORTHO05D026420 7.9e-08 62.0 227 27.8
Nitab4.5_0002958g0010 Nicotiana tabacum HOM05D019826 ORTHO05D022411 1.8e-07 60.8 266 27.8
Nitab4.5_0000020g0100 Nicotiana tabacum HOM05D019826 ORTHO05D022411 6.7e-07 58.9 268 27.6
CiPaw.14G034700 Carya illinoinensis HOM05D024410 ORTHO05D024910 1.5e-06 57.8 292 25.0


User provided reference genes

Program Settings