Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 8.3e-258 893.3 474 100.0
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 9.1e-180 634.0 481 68.6
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 1.9e-169 599.7 440 67.5
Nn1g02268 Nelumbo nucifera HOM05D006774 ORTHO05D008411 2.7e-168 595.9 397 76.6
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 3.6e-160 568.9 496 61.9
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 8.8e-159 564.3 491 62.7
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 1.2e-158 563.9 445 66.3
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 1.8e-156 556.6 459 64.3
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 4.1e-156 555.4 490 60.4
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 1.2e-150 537.3 481 60.9
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 1.8e-148 530.0 483 59.4
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 1.8e-148 530.0 482 60.0
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 7.0e-148 528.1 483 60.9
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 2.0e-147 526.6 488 57.4
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 1.7e-146 523.5 493 57.6
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 2.1e-144 516.5 477 57.7
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 3.6e-144 515.8 489 58.9
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 1.4e-143 513.8 479 58.9
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 1.8e-143 513.5 492 55.3
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 2.3e-143 513.1 484 57.4
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 8.8e-143 511.1 486 58.2
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 8.8e-143 511.1 483 57.8
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 1.2e-142 510.8 483 57.1
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 4.9e-141 505.4 474 56.1
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 6.3e-141 505.0 435 61.1
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 1.4e-140 503.8 488 57.0
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 1.6e-139 500.4 437 60.2
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.0e-138 497.7 445 55.1
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 2.5e-137 493.0 505 56.4
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 3.3e-137 492.7 432 60.6
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 3.3e-137 492.7 494 55.3
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 7.3e-137 491.5 480 56.2
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 7.3e-137 491.5 480 56.5
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 3.6e-136 489.2 425 59.1
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 4.7e-136 488.8 416 61.3
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 8.0e-136 488.0 419 60.6
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 1.8e-135 486.9 432 58.1
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 1.8e-135 486.9 447 54.1
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 3.0e-135 486.1 486 54.3
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 3.0e-135 486.1 433 58.4
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 5.2e-135 485.3 426 60.3
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 2.0e-134 483.4 427 58.1
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 4.4e-134 482.3 393 59.3
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 5.7e-134 481.9 480 54.8
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 9.8e-134 481.1 476 52.5
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 4.9e-133 478.8 390 58.5
Duzib128G0809 Durio zibethinus HOM05D006774 ORTHO05D008411 1.1e-132 477.6 454 57.5
RcHm_v2.0_Chr3g0454971 Rosa chinensis HOM05D006774 ORTHO05D008411 4.1e-132 475.7 457 54.5
BcaC09g49602 Brassica carinata HOM05D006774 ORTHO05D008411 9.2e-132 474.6 474 53.8
C01p34610 Brassica napus HOM05D006774 ORTHO05D008411 5.9e-131 471.9 474 53.6
BolC1t03432H Brassica oleracea HOM05D006774 ORTHO05D008411 5.9e-131 471.9 474 53.6
Haze_04191 Corylus avellana HOM05D006774 ORTHO05D008411 5.9e-131 471.9 413 58.4
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 5.9e-131 471.9 474 53.8
CSS0040526 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 1.7e-130 470.3 396 61.6
Sed0009699 Sechium edule HOM05D006774 ORTHO05D008411 2.3e-130 469.9 487 52.4
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 3.9e-130 469.2 443 56.2
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 5.0e-130 468.8 484 54.1
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 5.0e-130 468.8 484 54.1
BraA01t02861Z Brassica rapa HOM05D006774 ORTHO05D008411 1.1e-129 467.6 474 53.4
CsaV3_1G038960 Cucumis sativus L. HOM05D006774 ORTHO05D008411 1.9e-129 466.8 426 57.7
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 5.6e-129 465.3 481 55.3
A01p27210 Brassica napus HOM05D006774 ORTHO05D008411 7.3e-129 464.9 474 53.2
Lj1g0013332 Lotus japonicus HOM05D006774 ORTHO05D008411 9.5e-129 464.5 446 55.8
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 1.6e-128 463.8 481 55.9
BcaB04g20150 Brassica carinata HOM05D006774 ORTHO05D008411 4.7e-128 462.2 477 52.6
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 4.7e-128 462.2 485 53.4
CDE05G2690 Ceratophyllum demersum HOM05D006774 ORTHO05D008411 1.4e-127 460.7 424 54.7
AL1G65540 Arabidopsis lyrata HOM05D006774 ORTHO05D008411 1.2e-126 457.6 475 54.7
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 3.4e-126 456.1 389 61.2
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 5.8e-126 455.3 431 56.6
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 1.7e-125 453.8 418 59.3
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 2.2e-125 453.4 380 59.5
Ca_05814_v3 Cicer arietinum L. HOM05D006774 ORTHO05D008411 6.4e-125 451.8 422 57.8
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 1.1e-124 451.1 432 55.1
Lsat_1_v5_gn_9_86761 Lactuca sativa HOM05D006774 ORTHO05D008411 1.6e-123 447.2 448 52.5
RhsimUnG0226700 Rhododendron simsii HOM05D006774 ORTHO05D008411 1.6e-123 447.2 351 62.7
vmacro05013 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 1.6e-123 447.2 375 59.5
vmacro23279 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 1.6e-123 447.2 375 59.5
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 4.6e-123 445.7 351 66.1
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 6.0e-123 445.3 474 51.1
Lj9C83T13 Lonicera japonica HOM05D006774 ORTHO05D008411 2.3e-122 443.4 405 57.5
AT1G54990 Arabidopsis thaliana HOM05D006774 ORTHO05D008411 8.6e-122 441.4 481 53.2
AUR62000820 Chenopodium quinoa HOM05D006774 ORTHO05D008411 1.4e-119 434.1 397 54.7
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 1.3e-117 427.6 426 53.3
Lj9C82T10 Lonicera japonica HOM05D006774 ORTHO05D008411 4.1e-116 422.5 405 55.3
HanXRQChr11g0338551 Helianthus annuus HOM05D006774 ORTHO05D008411 3.0e-114 416.4 420 51.7
COL.COLO4_13460 Corchorus olitorius HOM05D006774 ORTHO05D008411 5.6e-113 412.1 407 54.5
Lj9C84T1 Lonicera japonica HOM05D006774 ORTHO05D008411 2.9e-109 399.8 329 59.9
Sabra13G0023900 Salix brachista HOM05D006774 ORTHO05D008411 1.0e-106 391.3 462 48.5
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 2.8e-104 383.3 343 56.9
Psat0s3041g0040 Pisum sativum HOM05D006774 ORTHO05D008411 8.1e-104 381.7 358 55.9
Dinv40294 Davidia involucrata HOM05D006774 ORTHO05D008411 1.4e-100 370.9 310 61.9
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 3.2e-100 369.8 343 55.7
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 1.0e-90 338.2 334 52.7
AUR62005151 Chenopodium quinoa HOM05D006774 ORTHO05D008411 5.3e-87 325.9 271 58.7
unitig_736.g22755 Utricularia gibba HOM05D006774 ORTHO05D008411 9.6e-81 305.1 458 38.9
PSO478G2742 Papaver somniferum HOM05D006774 ORTHO05D008411 1.3e-77 294.7 317 52.7
PSO782G1046 Papaver somniferum HOM05D006774 ORTHO05D008411 1.9e-65 254.2 294 50.0
Actinidia05698 Actinidia chinensis HOM05D006774 ORTHO05D008411 8.2e-64 248.8 182 66.5
Pp3c11_22860 Physcomitrium patens HOM05D006774 ORTHO05D008411 3.1e-63 246.9 452 33.4
Os11g0544100 Oryza sativa ssp. japonica HOM05D006774 ORTHO05D008411 2.5e-60 237.3 412 37.6
Zm00001eb197590 Zea mays HOM05D006774 ORTHO05D008411 2.2e-56 224.2 337 38.3
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 2.7e-51 207.2 476 33.4
Atru.chr12.689 Acer truncatum HOM05D006774 ORTHO05D008411 3.1e-47 193.7 196 52.6
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 3.1e-39 167.2 174 52.9
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 5.3e-39 166.4 178 51.7
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 5.3e-39 166.4 177 52.0
SMO145G0196 Selaginella moellendorffii HOM05D006774 ORTHO05D008411 5.9e-38 162.9 384 30.5
HPP92_006104 Vanilla planifolia HOM05D006774 ORTHO05D008411 5.5e-36 156.4 204 43.6
CSS0005750 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 2.9e-16 90.9 81 71.6
Oeu035485.2 Olea europaea HOM05D006774 ORTHO05D001341 4.1e-15 87.0 104 48.1
vmacro23280 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 1.7e-13 81.6 89 61.8
TAR362G0529 Trochodendron aralioides HOM05D006774 ORTHO05D008411 2.3e-13 81.3 63 58.7
vmacro05012 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 3.9e-13 80.5 89 60.7
RhsimUnG0226800 Rhododendron simsii HOM05D006774 ORTHO05D008411 7.3e-12 76.3 90 58.9
Nn3g21217 Nelumbo nucifera HOM05D006774 ORTHO05D008411 2.3e-10 71.2 43 79.1
Oeu051834.1 Olea europaea HOM05D006774 ORTHO05D008411 2.3e-10 71.2 83 57.8
SEGI_31760 Sequoiadendron giganteum HOM05D006774 ORTHO05D008411 2.6e-09 67.8 78 60.3
VMungo1127G0243 Vigna mungo HOM05D006774 ORTHO05D008411 5.4e-07 60.1 61 49.2


User provided reference genes

Program Settings