Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1272 Trochodendron aralioides HOM05D004325 ORTHO05D005470 1.2e-95 353.2 188 100.0
TAR362G0217 Trochodendron aralioides HOM05D004325 ORTHO05D005470 1.9e-88 329.3 186 93.0
CANSAT78G0850 Cannabis sativa HOM05D004325 ORTHO05D005470 3.5e-82 308.5 191 85.3
MBI19_g03261_MAGBIO Magnolia biondii HOM05D004325 ORTHO05D005470 5.9e-82 307.8 175 90.3
Cfa015290 Carpinus fangiana HOM05D004325 ORTHO05D005470 1.3e-81 306.6 184 85.3
Thecc.04G303800 Theobroma cacao HOM05D004325 ORTHO05D005470 1.3e-81 306.6 184 85.3
COL.COLO4_34588 Corchorus olitorius HOM05D004325 ORTHO05D005470 2.9e-81 305.4 177 87.6
Haze_01324 Corylus avellana HOM05D004325 ORTHO05D005470 2.9e-81 305.4 184 85.3
Duzib151G0878 Durio zibethinus HOM05D004325 ORTHO05D005470 3.8e-81 305.1 179 87.2
PSO421G0271 Papaver somniferum HOM05D004325 ORTHO05D005470 3.8e-81 305.1 187 84.5
arahy.Tifrunner.gnm1.ann1.H88EK8 Arachis hypogaea HOM05D004325 ORTHO05D005470 6.5e-81 304.3 185 84.9
arahy.Tifrunner.gnm1.ann1.RG9184 Arachis hypogaea HOM05D004325 ORTHO05D005470 6.5e-81 304.3 185 84.9
Cc03_g00680 Coffea canephora HOM05D004325 ORTHO05D005470 6.5e-81 304.3 187 84.5
Dinv44270 Davidia involucrata HOM05D004325 ORTHO05D005470 6.5e-81 304.3 181 87.8
Eucgr.E02007 Eucalyptus grandis HOM05D004325 ORTHO05D005470 8.5e-81 303.9 189 84.7
arahy.Tifrunner.gnm1.ann1.NK7FC1 Arachis hypogaea HOM05D004325 ORTHO05D005470 1.1e-80 303.5 185 84.3
PSO832G3679 Papaver somniferum HOM05D004325 ORTHO05D005470 1.5e-80 303.1 186 85.5
Duzib052G1161 Durio zibethinus HOM05D004325 ORTHO05D005470 2.5e-80 302.4 183 85.2
Gohir.A01G034900 Gossypium hirsutum HOM05D004325 ORTHO05D005470 4.2e-80 301.6 184 83.2
VMungo0540G0568 Vigna mungo HOM05D004325 ORTHO05D005470 4.2e-80 301.6 182 85.2
Ciclev10005911m.g Citrus clementina HOM05D004325 ORTHO05D005470 7.2e-80 300.8 187 84.5
Peaxi162Scf00228g00059 Petunia axillaris HOM05D004325 ORTHO05D005470 7.2e-80 300.8 184 84.8
Atru.chr4.3046 Acer truncatum HOM05D004325 ORTHO05D005470 9.4e-80 300.4 190 83.2
Glyma.09G034400 Glycine max HOM05D004325 ORTHO05D005470 9.4e-80 300.4 185 83.8
PSO063G1209 Papaver somniferum HOM05D004325 ORTHO05D005470 9.4e-80 300.4 186 84.4
Prupe.1G115000 Prunus persica HOM05D004325 ORTHO05D005470 1.2e-79 300.1 178 86.0
Lalb_Chr12g0200831 Lupinus albus HOM05D004325 ORTHO05D005470 1.6e-79 299.7 184 83.7
Migut.N00036 Erythranthe guttata HOM05D004325 ORTHO05D005470 3.6e-79 298.5 184 82.6
Glyma.15G139100 Glycine max HOM05D004325 ORTHO05D005470 4.7e-79 298.1 182 84.1
Gohir.D01G023556 Gossypium hirsutum HOM05D004325 ORTHO05D005470 6.1e-79 297.7 184 82.6
Gorai.002G030800 Gossypium raimondii HOM05D004325 ORTHO05D005470 6.1e-79 297.7 184 82.6
Actinidia13352 Actinidia chinensis HOM05D004325 ORTHO05D005470 8.0e-79 297.4 180 86.1
FvH4_4g20250 Fragaria vesca HOM05D004325 ORTHO05D005470 8.0e-79 297.4 184 83.2
Cpa.g.sc9.38 Carica papaya HOM05D004325 ORTHO05D005470 1.0e-78 297.0 173 86.1
Manes.03G206300 Manihot esculenta HOM05D004325 ORTHO05D005470 1.0e-78 297.0 184 82.1
CSS0027180 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D005470 1.4e-78 296.6 187 81.3
PGR004G2019 Punica granatum HOM05D004325 ORTHO05D005470 1.4e-78 296.6 184 84.2
RcHm_v2.0_Chr4g0425791 Rosa chinensis HOM05D004325 ORTHO05D005470 1.8e-78 296.2 184 82.6
Sc25g0003210 Simmondsia chinensis HOM05D004325 ORTHO05D005470 1.8e-78 296.2 187 81.3
MD13G1150800 Malus domestica HOM05D004325 ORTHO05D005470 2.3e-78 295.8 178 84.8
MD16G1151300 Malus domestica HOM05D004325 ORTHO05D005470 2.3e-78 295.8 178 84.8
Medtr2g033830 Medicago truncatula HOM05D004325 ORTHO05D005470 4.0e-78 295.0 181 84.0
Potri.008G103400 Populus trichocarpa HOM05D004325 ORTHO05D005470 4.0e-78 295.0 181 84.5
Hma1.2p1_0013F.1_g008360 Hydrangea macrophylla HOM05D004325 ORTHO05D005470 5.2e-78 294.7 180 85.0
ECA233G2476 Erigeron canadensis HOM05D004325 ORTHO05D005470 6.7e-78 294.3 175 85.7
Os12g0562900 Oryza sativa ssp. japonica HOM05D004325 ORTHO05D005470 1.2e-77 293.5 179 83.8
PSO724G0368 Papaver somniferum HOM05D004325 ORTHO05D005470 2.0e-77 292.7 187 81.3
CSS0047955 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D005470 2.6e-77 292.4 178 84.3
AUR62016229 Chenopodium quinoa HOM05D004325 ORTHO05D005470 3.3e-77 292.0 182 83.5
AUR62039261 Chenopodium quinoa HOM05D004325 ORTHO05D005470 3.3e-77 292.0 185 82.2
Sabra08G0078100 Salix brachista HOM05D004325 ORTHO05D005470 3.3e-77 292.0 187 80.7
MSTRG.24825 Avicennia marina HOM05D004325 ORTHO05D005470 4.4e-77 291.6 179 84.4
Potri.010G147600 Populus trichocarpa HOM05D004325 ORTHO05D005470 5.7e-77 291.2 188 83.0
Hund03133 Selenicereus undatus HOM05D004325 ORTHO05D005470 5.7e-77 291.2 180 83.9
Eucgr.D01575 Eucalyptus grandis HOM05D004325 ORTHO05D005470 7.5e-77 290.8 189 81.5
Phvul.006G119000 Phaseolus vulgaris HOM05D004325 ORTHO05D005470 9.7e-77 290.4 180 82.8
Ca_00969_v3 Cicer arietinum L. HOM05D004325 ORTHO05D005470 1.3e-76 290.0 187 80.2
ATR0693G272 Amborella trichopoda HOM05D004325 ORTHO05D005470 1.7e-76 289.7 180 82.8
Zm00001eb136920 Zea mays HOM05D004325 ORTHO05D005470 1.7e-76 289.7 174 85.1
Psat1g162400 Pisum sativum HOM05D004325 ORTHO05D005470 2.2e-76 289.3 187 80.2
Solyc05g053390.4 Solanum lycopersicum HOM05D004325 ORTHO05D005470 2.2e-76 289.3 176 84.1
Sopen05g031900 Solanum pennellii HOM05D004325 ORTHO05D005470 2.2e-76 289.3 176 84.1
THA.LOC104827099 Tarenaya hassleriana HOM05D004325 ORTHO05D005470 2.2e-76 289.3 180 81.7
Nitab4.5_0004165g0020 Nicotiana tabacum HOM05D004325 ORTHO05D005470 2.8e-76 288.9 173 85.0
PGSC0003DMG400027209 Solanum tuberosum HOM05D004325 ORTHO05D005470 3.7e-76 288.5 176 84.1
Rhsim02G0002800 Rhododendron simsii HOM05D004325 ORTHO05D005470 4.8e-76 288.1 179 82.7
SGA_v2.0_scaffold528G52737 Striga asiatica HOM05D004325 ORTHO05D005470 4.8e-76 288.1 206 73.8
CARHR287830 Cardamine hirsuta HOM05D004325 ORTHO05D005470 6.3e-76 287.7 185 80.5
TWI73G0086 Tripterygium wilfordii HOM05D004325 ORTHO05D005470 8.2e-76 287.3 187 79.1
Lj6g0013793 Lotus japonicus HOM05D004325 ORTHO05D005470 1.1e-75 287.0 185 80.0
Sed0024233 Sechium edule HOM05D004325 ORTHO05D005470 1.4e-75 286.6 189 80.4
Zm00001eb028520 Zea mays HOM05D004325 ORTHO05D005470 1.8e-75 286.2 174 83.9
Ah.13g071390 Amaranthus hybridus HOM05D004325 ORTHO05D005470 2.4e-75 285.8 187 81.3
TPR.G30807 Trifolium pratense HOM05D004325 ORTHO05D005470 2.4e-75 285.8 187 79.1
AT5G49510 Arabidopsis thaliana HOM05D004325 ORTHO05D005470 3.1e-75 285.4 181 80.1
AL8G23260 Arabidopsis lyrata HOM05D004325 ORTHO05D005470 5.3e-75 284.6 185 79.5
Carub.0008s0936 Capsella rubella HOM05D004325 ORTHO05D005470 5.3e-75 284.6 181 80.7
Nitab4.5_0000647g0250 Nicotiana tabacum HOM05D004325 ORTHO05D005470 5.3e-75 284.6 173 83.8
CDE01G0033 Ceratophyllum demersum HOM05D004325 ORTHO05D005470 9.1e-75 283.9 179 81.6
Thhalv10004957m.g Eutrema salsugineum HOM05D004325 ORTHO05D005470 9.1e-75 283.9 177 80.2
unitig_0.g2580 Utricularia gibba HOM05D004325 ORTHO05D005470 2.0e-74 282.7 189 77.8
Lsat_1_v5_gn_1_117981 Lactuca sativa HOM05D004325 ORTHO05D005470 2.7e-74 282.3 174 82.8
Nitab4.5_0000177g0050 Nicotiana tabacum HOM05D004325 ORTHO05D005470 2.7e-74 282.3 200 77.0
Aa31LG11G8140 Aethionema arabicum HOM05D004325 ORTHO05D005470 3.5e-74 282.0 204 75.0
HanXRQChr17g0569361 Helianthus annuus HOM05D004325 ORTHO05D005470 5.9e-74 281.2 172 83.1
Nitab4.5_0000891g0010 Nicotiana tabacum HOM05D004325 ORTHO05D005470 7.7e-74 280.8 200 77.0
Sed0016650 Sechium edule HOM05D004325 ORTHO05D005470 7.7e-74 280.8 181 80.1
FAN12G3971 Fragaria x ananassa HOM05D004325 ORTHO05D005470 1.0e-73 280.4 217 70.5
ClCG05G006650 Citrullus lanatus HOM05D004325 ORTHO05D005470 2.2e-73 279.3 180 81.7
Sp2g19810 Schrenkiella parvula HOM05D004325 ORTHO05D005470 2.2e-73 279.3 177 79.1
SpUn0021_0040 Schrenkiella parvula HOM05D004325 ORTHO05D005470 2.2e-73 279.3 177 79.1
THA.LOC104802708 Tarenaya hassleriana HOM05D004325 ORTHO05D005470 2.2e-73 279.3 179 81.0
Hund11985 Selenicereus undatus HOM05D004325 ORTHO05D005470 3.8e-73 278.5 182 78.0
BcaC04g23736 Brassica carinata HOM05D004325 ORTHO05D005470 5.0e-73 278.1 181 78.5
C09p05230 Brassica napus HOM05D004325 ORTHO05D005470 5.0e-73 278.1 181 78.5
A06p38330 Brassica napus HOM05D004325 ORTHO05D005470 1.1e-72 276.9 177 79.1
A09p04850 Brassica napus HOM05D004325 ORTHO05D005470 1.1e-72 276.9 181 78.5
C07p39920 Brassica napus HOM05D004325 ORTHO05D005470 1.1e-72 276.9 177 79.1
BolC7t44524H Brassica oleracea HOM05D004325 ORTHO05D005470 1.1e-72 276.9 177 79.1
BraA06t26747Z Brassica rapa HOM05D004325 ORTHO05D005470 1.1e-72 276.9 177 79.1
BraA09t36122Z Brassica rapa HOM05D004325 ORTHO05D005470 1.1e-72 276.9 181 77.9
CsaV3_3G015280 Cucumis sativus L. HOM05D004325 ORTHO05D005470 1.1e-72 276.9 189 78.8
vmacro15176 Vaccinium macrocarpon HOM05D004325 ORTHO05D005470 1.5e-72 276.6 221 69.2
BcaB04g19615 Brassica carinata HOM05D004325 ORTHO05D005470 1.9e-72 276.2 178 77.5
HPP92_027563 Vanilla planifolia HOM05D004325 ORTHO05D005470 1.9e-72 276.2 185 78.4
Aqoxy3G01635 Aquilegia oxysepala HOM05D004325 ORTHO05D005470 5.5e-72 274.6 187 78.1
FAN07G0536 Fragaria x ananassa HOM05D004325 ORTHO05D005470 5.5e-72 274.6 226 67.3
Lj3A833G34 Lonicera japonica HOM05D004325 ORTHO05D005470 1.6e-71 273.1 156 91.7
Sabra10G0113800 Salix brachista HOM05D004325 ORTHO05D005470 4.0e-70 268.5 225 67.1
Nn3g21742 Nelumbo nucifera HOM05D004325 ORTHO05D005470 6.3e-68 261.2 187 77.0
SalBow5G2618 Salvia bowleyana HOM05D004325 ORTHO05D005470 7.0e-67 257.7 160 81.9
TWI09G1034 Tripterygium wilfordii HOM05D004325 ORTHO05D005470 1.6e-66 256.5 187 73.3
EL10Ac3g05527 Beta vulgaris HOM05D004325 ORTHO05D005470 3.5e-66 255.4 159 83.6
BolC9t53449H Brassica oleracea HOM05D004325 ORTHO05D005470 8.6e-65 250.8 241 58.9
Mapoly0057s0039 Marchantia polymorpha HOM05D004325 ORTHO05D005470 8.0e-63 244.2 175 70.9
Eucgr.E01999 Eucalyptus grandis HOM05D004325 ORTHO05D005470 4.4e-61 238.4 189 70.9
SEGI_09014 Sequoiadendron giganteum HOM05D004325 ORTHO05D005470 7.5e-61 237.7 177 68.9
GSVIVG01034969001 Vitis vinifera HOM05D004325 ORTHO05D005470 1.3e-60 236.9 131 92.4
SMO116G0307 Selaginella moellendorffii HOM05D004325 ORTHO05D005470 1.4e-59 233.4 173 69.4
CAN.G945.3 Capsicum annuum HOM05D004325 ORTHO05D005470 1.8e-59 233.0 137 86.1
TPR.G28959 Trifolium pratense HOM05D004325 ORTHO05D005470 1.7e-57 226.5 144 81.9
Oeu001162.1 Olea europaea HOM05D004325 ORTHO05D005470 2.9e-57 225.7 134 86.6
CiPaw.01G136700 Carya illinoinensis HOM05D004325 ORTHO05D005470 8.6e-57 224.2 131 87.0
Pp3c8_18130 Physcomitrium patens HOM05D004325 ORTHO05D005470 2.8e-55 219.2 178 62.4
AagrBONN_evm.TU.Sc2ySwM_344.4436 Anthoceros agrestis HOM05D004325 ORTHO05D005470 1.5e-53 213.4 172 61.0
Eucgr.E01982 Eucalyptus grandis HOM05D004325 ORTHO05D005470 2.9e-52 209.1 129 84.5
Lalb_Chr13g0298551 Lupinus albus HOM05D004325 ORTHO05D005470 6.4e-52 208.0 135 80.0
CDE12G0495 Ceratophyllum demersum HOM05D004325 ORTHO05D005470 2.7e-50 202.6 127 82.7
CiPaw.02G073600 Carya illinoinensis HOM05D004325 ORTHO05D005470 1.0e-49 200.7 204 60.3
MELO3C006723.2 Cucumis melo HOM05D004325 ORTHO05D005470 1.1e-48 197.2 135 75.6
Sopen01g024490 Solanum pennellii HOM05D004325 ORTHO05D005470 3.6e-47 192.2 110 90.0
HPP92_017247 Vanilla planifolia HOM05D004325 ORTHO05D005470 3.6e-47 192.2 112 87.5
MSTRG.3849 Avicennia marina HOM05D004325 ORTHO05D005470 2.3e-46 189.5 127 74.0
Eucgr.D01598 Eucalyptus grandis HOM05D004325 ORTHO05D005470 2.3e-41 172.9 109 82.6
Actinidia18462 Actinidia chinensis HOM05D004325 ORTHO05D005470 6.6e-41 171.4 113 79.6
Eucgr.D01586 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.1e-40 170.6 102 83.3
QL06p012738 Quercus lobata HOM05D004325 ORTHO05D005470 1.1e-38 164.1 101 83.2
Eucgr.D01580 Eucalyptus grandis HOM05D004325 ORTHO05D005470 1.1e-35 154.1 99 78.8
HPP92_017255 Vanilla planifolia HOM05D004325 ORTHO05D005470 4.6e-34 148.7 88 87.5
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 2.3e-33 146.4 102 75.5
PRCOL_00000812 Prasinoderma coloniale HOM05D004325 ORTHO05D005470 1.5e-32 143.7 173 46.2
Eucgr.D01581 Eucalyptus grandis HOM05D004325 ORTHO05D005470 2.1e-31 139.8 82 86.6
MCO08G322 Micromonas commoda HOM05D004325 ORTHO05D005470 1.1e-30 137.5 163 44.2
QL06p012730 Quercus lobata HOM05D004325 ORTHO05D005470 3.1e-30 136.0 85 83.5
DCAR_026989 Daucus carota HOM05D004325 ORTHO05D005470 8.9e-30 134.4 85 81.2
MBI14_g36884_MAGBIO Magnolia biondii HOM05D004325 ORTHO05D005470 1.2e-29 134.0 104 72.1
Haze_26161 Corylus avellana HOM05D004325 ORTHO05D005470 1.1e-27 127.5 170 40.0
Eucgr.D01577 Eucalyptus grandis HOM05D004325 ORTHO05D005470 5.4e-27 125.2 98 69.4
Glyma.07G238200 Glycine max HOM05D004325 ORTHO05D005470 4.6e-26 122.1 75 81.3
Cre06.g261650 Chlamydomonas reinhardtii HOM05D004325 ORTHO05D005470 6.0e-26 121.7 178 36.5
Glyma.17G035301 Glycine max HOM05D004325 ORTHO05D005470 3.9e-25 119.0 101 66.3
CBR_g12436 Chara braunii HOM05D004325 ORTHO05D005470 1.1e-24 117.5 85 67.1
Actinidia31558 Actinidia chinensis HOM05D004325 ORTHO05D005470 4.2e-19 99.0 64 78.1
Eucgr.E01978 Eucalyptus grandis HOM05D004325 ORTHO05D005470 8.1e-15 84.7 60 71.7
Solyc01g058597.1 Solanum lycopersicum HOM05D004325 ORTHO05D005470 1.5e-13 80.5 47 83.0
CSS0004484 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 9.9e-13 77.8 111 45.9
CSS0039135 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 2.9e-12 76.3 111 45.0
CSS0044452 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 2.9e-12 76.3 111 45.0
CSS0031168 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 1.1e-11 74.3 111 44.1
CSS0013046 Camellia sinensis var. sinensis HOM05D004325 ORTHO05D022134 1.4e-11 73.9 111 44.1
TPR.G25439 Trifolium pratense HOM05D004325 ORTHO05D005470 1.8e-09 67.0 114 43.9
TPR.G26018 Trifolium pratense HOM05D004325 ORTHO05D049290 1.1e-08 64.3 60 58.3
Actinidia14254 Actinidia chinensis HOM05D004325 ORTHO05D005470 6.2e-07 58.5 36 77.8
Nn4g25553 Nelumbo nucifera HOM05D004325 ORTHO05D049290 3.1e-06 56.2 35 77.1


User provided reference genes

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