Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 0.0e+00 1236.5 600 100.0
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 2.1e-274 948.7 481 95.2
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 3.5e-237 825.1 478 82.0
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 2.3e-236 822.4 481 84.0
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 4.3e-235 818.1 466 82.0
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 5.6e-235 817.8 470 82.8
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 6.2e-234 814.3 470 81.1
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 5.2e-233 811.2 470 81.5
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 8.9e-233 810.4 470 80.6
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 1.2e-232 810.1 470 80.9
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 2.2e-231 805.8 470 81.5
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 3.8e-231 805.1 467 80.5
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 4.9e-231 804.7 470 79.8
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 1.1e-230 803.5 465 81.3
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.4e-230 803.1 474 79.3
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 1.9e-230 802.7 470 80.9
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 7.1e-230 800.8 474 79.1
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 1.6e-229 799.7 474 79.1
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 1.6e-229 799.7 480 78.8
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 2.7e-229 798.9 470 80.2
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 3.5e-229 798.5 470 79.4
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 6.0e-229 797.7 471 78.8
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 7.8e-229 797.3 474 79.1
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 1.0e-228 797.0 470 80.0
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 3.0e-228 795.4 470 80.0
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 3.9e-228 795.0 465 79.8
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 8.7e-228 793.9 469 81.2
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 8.7e-228 793.9 469 81.2
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 1.5e-227 793.1 471 79.6
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 3.3e-227 792.0 470 79.1
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 5.6e-227 791.2 470 79.1
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 5.6e-227 791.2 470 80.2
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 9.6e-227 790.4 470 79.1
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 1.2e-226 790.0 471 79.2
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 2.1e-226 789.3 465 79.6
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 2.8e-226 788.9 470 78.3
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 3.6e-226 788.5 470 80.0
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 4.7e-226 788.1 496 75.4
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 6.2e-226 787.7 470 78.1
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 1.1e-225 786.9 470 79.6
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 1.4e-225 786.6 465 79.8
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 1.8e-225 786.2 470 79.6
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 2.4e-225 785.8 465 79.6
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 2.4e-225 785.8 470 78.5
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 3.1e-225 785.4 470 78.5
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 4.0e-225 785.0 470 79.8
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 4.0e-225 785.0 465 79.8
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 4.0e-225 785.0 466 79.0
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 2.0e-224 782.7 499 74.9
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 2.6e-224 782.3 499 74.9
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 2.6e-224 782.3 470 79.1
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 4.4e-224 781.6 469 78.5
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 7.6e-224 780.8 465 78.1
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 9.9e-224 780.4 470 79.4
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 1.7e-223 779.6 466 79.4
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 1.7e-223 779.6 471 77.7
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 2.9e-223 778.9 494 76.9
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 8.4e-223 777.3 469 78.5
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 1.1e-222 776.9 465 78.3
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 1.1e-222 776.9 471 77.5
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 1.4e-222 776.5 469 77.8
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 1.4e-222 776.5 465 77.6
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 2.4e-222 775.8 470 77.2
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 2.4e-222 775.8 471 78.1
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 2.4e-222 775.8 471 76.9
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 3.2e-222 775.4 471 77.3
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 3.2e-222 775.4 471 77.1
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 3.2e-222 775.4 470 78.5
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 4.2e-222 775.0 471 77.1
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 4.2e-222 775.0 471 77.3
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 4.2e-222 775.0 471 77.3
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 9.3e-222 773.9 470 78.9
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.2e-221 773.5 470 77.2
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.6e-221 773.1 504 74.4
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 2.7e-221 772.3 471 77.5
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 3.5e-221 771.9 471 76.4
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 3.5e-221 771.9 470 78.1
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 3.5e-221 771.9 470 78.1
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 4.6e-221 771.5 470 78.3
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 6.0e-221 771.2 470 77.0
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 7.8e-221 770.8 481 75.7
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 1.0e-220 770.4 471 77.3
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 1.7e-220 769.6 472 76.1
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 3.0e-220 768.8 466 77.3
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 3.0e-220 768.8 466 77.3
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 3.0e-220 768.8 470 77.7
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 3.9e-220 768.5 470 77.7
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 1.5e-219 766.5 471 76.4
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 1.5e-219 766.5 467 77.3
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 1.9e-219 766.1 471 75.4
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 2.5e-219 765.8 470 75.1
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 3.3e-219 765.4 480 76.5
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 4.3e-219 765.0 470 75.5
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 1.6e-218 763.1 467 76.4
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 2.8e-218 762.3 470 77.0
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 4.8e-218 761.5 470 75.3
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 6.2e-218 761.1 470 76.8
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 2.4e-217 759.2 470 76.4
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 3.1e-217 758.8 480 74.8
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 4.0e-217 758.4 486 75.1
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 4.0e-217 758.4 470 74.7
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 1.2e-216 756.9 467 75.8
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 1.2e-216 756.9 467 75.8
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 1.2e-216 756.9 470 75.5
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 4.5e-216 755.0 467 75.4
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 5.8e-216 754.6 467 75.4
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 7.6e-216 754.2 470 74.9
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.4e-215 750.7 466 76.0
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 1.9e-214 749.6 470 74.5
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 8.7e-212 740.7 471 74.7
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 1.1e-211 740.3 465 75.9
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 1.5e-211 740.0 413 83.8
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 1.5e-211 740.0 467 76.7
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 4.3e-211 738.4 441 78.5
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 8.1e-210 734.2 470 76.2
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 2.4e-209 732.6 470 74.7
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 2.4e-209 732.6 471 73.2
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 4.0e-209 731.9 470 74.7
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 5.3e-209 731.5 429 79.7
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 2.6e-208 729.2 416 82.0
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 4.5e-208 728.4 470 74.9
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 7.6e-208 727.6 429 79.3
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 8.4e-207 724.2 470 71.9
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 1.1e-206 723.8 416 80.3
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 1.4e-206 723.4 470 71.9
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 2.4e-206 722.6 473 72.3
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 2.1e-205 719.5 470 72.1
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 1.0e-204 717.2 499 70.1
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 5.1e-204 714.9 465 73.3
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 1.5e-203 713.4 500 69.8
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 7.4e-203 711.1 470 71.9
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 2.1e-202 709.5 525 67.8
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 1.4e-201 706.8 470 73.4
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 3.8e-199 698.7 439 75.9
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 1.8e-196 689.9 470 71.3
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 1.1e-195 687.2 470 72.6
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 2.2e-194 682.9 510 67.6
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 3.0e-188 662.5 491 64.8
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 4.3e-187 658.7 380 83.7
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 8.2e-186 654.4 376 81.9
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 7.2e-182 641.3 470 65.3
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 4.7e-181 638.6 412 76.2
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 1.4e-180 637.1 480 65.8
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 1.1e-179 634.0 421 71.3
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 1.2e-173 614.0 499 60.5
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 9.7e-171 604.4 448 63.4
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 4.0e-164 582.4 455 64.2
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 7.5e-163 578.2 474 59.7
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 2.7e-157 559.7 510 57.5
TPR.G23479 Trifolium pratense HOM05D003954 ORTHO05D004627 9.8e-155 551.2 331 77.9
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 2.6e-147 526.6 466 54.9
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 8.6e-143 511.5 352 72.4
TAR626G0478 Trochodendron aralioides HOM05D003954 ORTHO05D004627 4.4e-139 499.2 265 87.5
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 2.8e-125 453.4 283 76.0
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.4e-124 451.1 291 75.3
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 2.4e-108 397.1 250 74.8
A09p12640 Brassica napus HOM05D003954 ORTHO05D004627 1.2e-107 394.8 243 75.3
CAN.G3537.1 Capsicum annuum HOM05D003954 ORTHO05D004627 9.3e-105 385.2 239 74.9
Lj4C389T2 Lonicera japonica HOM05D003954 ORTHO05D004627 1.3e-103 381.3 238 76.1
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 4.8e-85 319.7 204 77.0
ClCG03G016150 Citrullus lanatus HOM05D003954 ORTHO05D004627 3.1e-76 290.4 193 68.9
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 3.8e-58 230.3 459 32.2
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 2.3e-55 221.1 132 78.0
PRCOL_00001038 Prasinoderma coloniale HOM05D003954 ORTHO05D004627 2.6e-51 207.6 483 31.5
Actinidia32652 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.3e-34 152.1 190 46.8
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 8.6e-34 149.4 109 66.1
SEGI_30237 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 3.7e-29 134.0 91 63.7
Actinidia34604 Actinidia chinensis HOM05D003954 ORTHO05D004627 7.5e-22 109.8 143 49.7
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 4.9e-21 107.1 58 82.8
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 8.3e-21 106.3 60 80.0
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 1.2e-16 92.4 149 36.2
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.2e-14 85.9 165 41.2
Os01g0906000 Oryza sativa ssp. japonica HOM05D003954 ORTHO05D004627 1.6e-08 65.5 36 77.8
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 1.8e-07 62.0 49 61.2
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.1e-07 61.2 37 75.7
TPR.G21382 Trifolium pratense HOM05D003954 ORTHO05D004627 8.9e-07 59.7 55 60.0


User provided reference genes

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