Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 7.0e-113 410.6 203 100.0
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 1.2e-83 313.5 170 92.9
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 2.6e-43 179.5 177 57.6
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 2.9e-42 176.0 177 57.1
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 1.4e-41 173.7 171 56.7
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 2.1e-40 169.9 171 53.8
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 7.9e-40 167.9 203 50.7
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 5.1e-39 165.2 179 55.3
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 5.6e-38 161.8 164 51.8
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 9.6e-38 161.0 176 50.6
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 2.1e-37 159.8 178 53.4
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 2.8e-37 159.5 177 52.0
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 3.7e-37 159.1 173 51.4
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 1.2e-35 154.1 172 51.2
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.5e-35 153.7 167 49.1
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 2.0e-35 153.3 168 54.8
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 2.6e-35 152.9 170 47.6
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 7.6e-35 151.4 177 49.2
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 1.0e-34 151.0 171 49.1
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 1.7e-34 150.2 171 52.0
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 4.9e-34 148.7 174 48.3
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 6.5e-34 148.3 176 50.6
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.9e-33 146.7 167 47.9
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 1.9e-33 146.7 171 48.0
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 5.5e-33 145.2 167 49.1
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 5.5e-33 145.2 165 49.7
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 5.5e-33 145.2 165 49.7
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 7.1e-33 144.8 177 49.2
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 2.7e-32 142.9 189 50.8
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 3.5e-32 142.5 172 48.3
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 3.5e-32 142.5 170 48.8
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 4.6e-32 142.1 167 47.3
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 7.9e-32 141.4 167 46.7
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 1.0e-31 141.0 175 52.6
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.3e-31 139.8 173 46.2
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 5.1e-31 138.7 173 46.2
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 5.1e-31 138.7 173 46.2
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.5e-30 137.1 164 47.6
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 1.6e-29 133.7 183 50.3
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 2.8e-29 132.9 171 43.9
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 4.8e-29 132.1 167 47.3
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 4.8e-29 132.1 168 46.4
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 1.4e-28 130.6 173 45.7
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 4.1e-28 129.0 173 47.4
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 9.0e-28 127.9 204 40.2
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 1.2e-27 127.5 169 46.7
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 2.0e-27 126.7 175 50.9
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 3.4e-27 125.9 172 45.3
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 5.9e-27 125.2 171 45.6
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 5.9e-27 125.2 171 45.6
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 1.7e-26 123.6 185 44.9
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 3.8e-26 122.5 167 47.3
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 5.0e-26 122.1 169 44.4
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 6.5e-26 121.7 166 46.4
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 8.4e-26 121.3 171 47.4
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 8.4e-26 121.3 170 44.1
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 1.9e-25 120.2 170 44.7
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.9e-25 120.2 165 46.1
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 2.5e-25 119.8 173 46.2
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 4.2e-25 119.0 176 42.0
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.2e-24 117.5 164 45.7
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 4.6e-24 115.5 167 44.3
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 6.1e-24 115.2 166 45.8
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 6.1e-24 115.2 170 44.1
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 7.9e-24 114.8 167 43.7
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 1.0e-23 114.4 168 42.9
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 2.3e-23 113.2 166 45.2
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 2.3e-23 113.2 163 45.4
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 3.0e-23 112.8 168 43.5
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 3.9e-23 112.5 167 44.3
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 2.5e-22 109.8 167 42.5
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 2.8e-21 106.3 207 37.7
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 3.7e-21 105.9 203 36.5
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.1e-20 104.4 165 43.6
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.4e-20 104.0 165 43.6
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 2.4e-20 103.2 180 41.1
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 4.5e-19 99.0 176 39.2
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 2.2e-18 96.7 164 43.3
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 2.9e-18 96.3 170 38.2
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 6.5e-18 95.1 171 36.8
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 5.5e-17 92.0 170 37.1
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 1.6e-16 90.5 166 39.8
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 2.1e-16 90.1 145 42.8
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 2.7e-16 89.7 165 38.2
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 4.6e-16 89.0 173 34.7
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 1.4e-12 77.4 106 46.2
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 6.5e-10 68.6 82 51.2
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.8e-07 60.5 67 52.2
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 5.1e-07 58.9 172 30.2
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 5.7e-06 55.5 176 30.1


User provided reference genes

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