Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1089 Trochodendron aralioides HOM05D000928 ORTHO05D000023 1.5e-62 242.7 124 100.0
TAR633G2766 Trochodendron aralioides HOM05D000928 ORTHO05D000023 3.7e-48 194.9 138 75.4
TAR633G0595 Trochodendron aralioides HOM05D000928 ORTHO05D000023 2.5e-44 182.2 119 79.0
TAR362G0945 Trochodendron aralioides HOM05D000928 ORTHO05D000023 2.1e-43 179.1 120 75.0
MBI18_g15331_MAGBIO Magnolia biondii HOM05D000928 ORTHO05D000023 1.4e-39 166.4 118 72.9
Dinv34612 Davidia involucrata HOM05D000928 ORTHO05D000023 2.6e-38 162.2 118 69.5
QL09p038262 Quercus lobata HOM05D000928 ORTHO05D000023 2.2e-37 159.1 122 68.9
GSVIVG01028305001 Vitis vinifera HOM05D000928 ORTHO05D000023 3.8e-37 158.3 123 65.9
MD05G1199500 Malus domestica HOM05D000928 ORTHO05D000023 5.0e-37 157.9 116 69.8
Ciclev10019294m.g Citrus clementina HOM05D000928 ORTHO05D000023 1.6e-35 152.9 123 64.2
Dinv22415 Davidia involucrata HOM05D000928 ORTHO05D000023 2.1e-35 152.5 118 66.1
CiPaw.04G185800 Carya illinoinensis HOM05D000928 ORTHO05D000023 2.7e-35 152.1 123 64.2
Cpa.g.sc50.32 Carica papaya HOM05D000928 ORTHO05D000023 3.6e-35 151.8 120 67.5
Medtr1g070145 Medicago truncatula HOM05D000928 ORTHO05D000023 3.6e-35 151.8 124 62.1
Lalb_Chr21g0313821 Lupinus albus HOM05D000928 ORTHO05D000023 6.1e-35 151.0 120 64.2
Thecc.01G260200 Theobroma cacao HOM05D000928 ORTHO05D000023 6.1e-35 151.0 122 65.6
CsaV3_7G027390 Cucumis sativus L. HOM05D000928 ORTHO05D000023 1.0e-34 150.2 123 61.8
CSS0021821 Camellia sinensis var. sinensis HOM05D000928 ORTHO05D000023 1.4e-34 149.8 123 62.6
ClCG09G007750 Citrullus lanatus HOM05D000928 ORTHO05D000023 1.4e-34 149.8 123 60.2
MELO3C015740.2 Cucumis melo HOM05D000928 ORTHO05D000023 1.4e-34 149.8 123 61.0
Rhsim01G0265200 Rhododendron simsii HOM05D000928 ORTHO05D000023 1.4e-34 149.8 123 62.6
Manes.13G032900 Manihot esculenta HOM05D000928 ORTHO05D000023 2.3e-34 149.1 124 63.7
Duzib138G0579 Durio zibethinus HOM05D000928 ORTHO05D000023 3.0e-34 148.7 122 61.5
Lj2A1153T50 Lonicera japonica HOM05D000928 ORTHO05D000023 3.0e-34 148.7 119 60.5
Sed0008055 Sechium edule HOM05D000928 ORTHO05D000023 3.9e-34 148.3 122 61.5
Prupe.8G225300 Prunus persica HOM05D000928 ORTHO05D000023 6.7e-34 147.5 115 68.7
TWI18G0710 Tripterygium wilfordii HOM05D000928 ORTHO05D000023 6.7e-34 147.5 105 68.6
Nn1g02726 Nelumbo nucifera HOM05D000928 ORTHO05D000023 1.1e-33 146.7 104 71.2
Glyma.10G035900 Glycine max HOM05D000928 ORTHO05D000023 1.5e-33 146.4 100 70.0
Oeu039682.1 Olea europaea HOM05D000928 ORTHO05D000023 2.0e-33 146.0 123 63.4
TPR.G3579 Trifolium pratense HOM05D000928 ORTHO05D000023 3.3e-33 145.2 131 58.0
Gohir.A08G189400 Gossypium hirsutum HOM05D000928 ORTHO05D000023 4.4e-33 144.8 122 59.8
Atru.chr5.1649 Acer truncatum HOM05D000928 ORTHO05D000023 5.7e-33 144.4 123 58.5
Phvul.007G194200 Phaseolus vulgaris HOM05D000928 ORTHO05D000023 5.7e-33 144.4 115 65.2
arahy.Tifrunner.gnm1.ann1.6R2DR5 Arachis hypogaea HOM05D000928 ORTHO05D000023 7.4e-33 144.1 115 63.5
arahy.Tifrunner.gnm1.ann1.VXR6Q5 Arachis hypogaea HOM05D000928 ORTHO05D000023 9.7e-33 143.7 115 63.5
FvH4_2g21700 Fragaria vesca HOM05D000928 ORTHO05D000023 9.7e-33 143.7 118 65.3
FAN24G1393 Fragaria x ananassa HOM05D000928 ORTHO05D000023 9.7e-33 143.7 118 65.3
RcHm_v2.0_Chr6g0288381 Rosa chinensis HOM05D000928 ORTHO05D000023 9.7e-33 143.7 118 64.4
Cc01_g18440 Coffea canephora HOM05D000928 ORTHO05D000023 1.3e-32 143.3 122 61.5
Haze_24611 Corylus avellana HOM05D000928 ORTHO05D000023 1.3e-32 143.3 105 70.5
Psat6g055360 Pisum sativum HOM05D000928 ORTHO05D000023 1.3e-32 143.3 102 70.6
Gohir.A11G130000 Gossypium hirsutum HOM05D000928 ORTHO05D000023 1.7e-32 142.9 122 59.8
Gohir.D11G135700 Gossypium hirsutum HOM05D000928 ORTHO05D000023 3.7e-32 141.7 122 59.0
Gorai.007G145300 Gossypium raimondii HOM05D000928 ORTHO05D000023 3.7e-32 141.7 122 59.0
Cfa002412 Carpinus fangiana HOM05D000928 ORTHO05D000023 4.8e-32 141.4 105 69.5
Ca_09688_v3 Cicer arietinum L. HOM05D000928 ORTHO05D000023 4.8e-32 141.4 120 62.5
PSO384G4222 Papaver somniferum HOM05D000928 ORTHO05D000023 4.8e-32 141.4 116 64.7
Sc17g0000720 Simmondsia chinensis HOM05D000928 ORTHO05D000023 4.8e-32 141.4 117 61.5
TWI12G0138 Tripterygium wilfordii HOM05D000928 ORTHO05D000023 4.8e-32 141.4 105 66.7
Eucgr.K03268 Eucalyptus grandis HOM05D000928 ORTHO05D000023 6.3e-32 141.0 104 66.3
FAN15G1834 Fragaria x ananassa HOM05D000928 ORTHO05D000023 6.3e-32 141.0 118 63.6
FAN27G2497 Fragaria x ananassa HOM05D000928 ORTHO05D000023 6.3e-32 141.0 118 64.4
Glyma.13G122300 Glycine max HOM05D000928 ORTHO05D000023 6.3e-32 141.0 100 67.0
Potri.005G222900 Populus trichocarpa HOM05D000928 ORTHO05D000023 4.1e-31 138.3 106 65.1
Lj5g0008005 Lotus japonicus HOM05D000928 ORTHO05D000023 5.3e-31 137.9 122 61.5
ATR0680G125 Amborella trichopoda HOM05D000928 ORTHO05D000023 1.2e-30 136.7 124 58.1
Sabra05G0171600 Salix brachista HOM05D000928 ORTHO05D000023 1.2e-30 136.7 105 64.8
Aa31LG5G5690 Aethionema arabicum HOM05D003973 ORTHO05D004679 1.6e-30 136.3 106 66.0
Aqoxy1G01844 Aquilegia oxysepala HOM05D000928 ORTHO05D000023 1.6e-30 136.3 107 63.6
DCAR_012535 Daucus carota HOM05D000928 ORTHO05D000023 1.6e-30 136.3 113 60.2
CARHR124840 Cardamine hirsuta HOM05D000928 ORTHO05D000023 7.7e-30 134.0 107 64.5
Thhalv10016393m.g Eutrema salsugineum HOM05D000928 ORTHO05D000023 1.0e-29 133.7 106 65.1
Nitab4.5_0000086g0120 Nicotiana tabacum HOM05D000928 ORTHO05D000023 1.0e-29 133.7 123 56.9
THA.LOC104800874 Tarenaya hassleriana HOM05D000928 ORTHO05D000023 1.0e-29 133.7 103 65.0
COL.COLO4_05174 Corchorus olitorius HOM05D000928 ORTHO05D000023 1.3e-29 133.3 103 64.1
Nitab4.5_0005119g0010 Nicotiana tabacum HOM05D000928 ORTHO05D000023 1.3e-29 133.3 123 56.9
AL4G26460 Arabidopsis lyrata HOM05D000928 ORTHO05D000023 2.9e-29 132.1 106 64.2
CANSAT78G1219 Cannabis sativa HOM05D000928 ORTHO05D000023 8.5e-29 130.6 112 60.7
Solyc09g066290.3 Solanum lycopersicum HOM05D000928 ORTHO05D000023 1.1e-28 130.2 107 62.6
Carub.0004s1252 Capsella rubella HOM05D000928 ORTHO05D000023 1.5e-28 129.8 106 63.2
PGSC0003DMG400009714 Solanum tuberosum HOM05D000928 ORTHO05D000023 1.5e-28 129.8 107 62.6
Peaxi162Scf00134g00614 Petunia axillaris HOM05D000928 ORTHO05D000023 1.9e-28 129.4 120 57.5
Sopen09g027990 Solanum pennellii HOM05D000928 ORTHO05D000023 1.9e-28 129.4 107 62.6
AT2G31240 Arabidopsis thaliana HOM05D000928 ORTHO05D000023 4.2e-28 128.3 105 62.9
BcaB06g28519 Brassica carinata HOM05D000928 ORTHO05D000023 4.2e-28 128.3 105 62.9
C04p60760 Brassica napus HOM05D000928 ORTHO05D000023 4.2e-28 128.3 105 62.9
BolC4t27567H Brassica oleracea HOM05D000928 ORTHO05D000023 4.2e-28 128.3 105 62.9
Hund09597 Selenicereus undatus HOM05D000928 ORTHO05D000023 5.5e-28 127.9 107 59.8
A04p24080 Brassica napus HOM05D000928 ORTHO05D000023 7.2e-28 127.5 105 62.9
BraA04t17927Z Brassica rapa HOM05D000928 ORTHO05D000023 7.2e-28 127.5 105 62.9
Sp4g13730 Schrenkiella parvula HOM05D000928 ORTHO05D000023 7.2e-28 127.5 105 61.9
BcaB06g28434 Brassica carinata HOM05D000928 ORTHO05D000023 9.4e-28 127.1 105 61.9
EL10Ac5g10413 Beta vulgaris HOM05D000928 ORTHO05D000023 3.6e-27 125.2 102 62.7
CDE06G1208 Ceratophyllum demersum HOM05D000928 ORTHO05D000023 3.6e-27 125.2 97 61.9
Os02g0820300 Oryza sativa ssp. japonica HOM05D000928 ORTHO05D000023 4.7e-27 124.8 103 61.2
MSTRG.21500 Avicennia marina HOM05D000928 ORTHO05D000023 6.1e-27 124.4 93 64.5
AUR62011887 Chenopodium quinoa HOM05D000928 ORTHO05D000023 1.8e-26 122.9 105 61.9
AUR62024728 Chenopodium quinoa HOM05D000928 ORTHO05D000023 1.8e-26 122.9 105 61.9
Migut.D00415 Erythranthe guttata HOM05D000928 ORTHO05D000023 4.0e-26 121.7 124 52.4
CAN.G977.2 Capsicum annuum HOM05D000928 ORTHO05D000023 5.2e-26 121.3 112 57.1
Lsat_1_v5_gn_9_8701 Lactuca sativa HOM05D000928 ORTHO05D000023 1.1e-25 120.2 87 65.5
HanXRQChr10g0281051 Helianthus annuus HOM05D000928 ORTHO05D000023 1.5e-25 119.8 120 54.2
CDE02G2275 Ceratophyllum demersum HOM05D000928 ORTHO05D000023 2.6e-25 119.0 90 62.2
ECA247G3729 Erigeron canadensis HOM05D000928 ORTHO05D000023 3.3e-25 118.6 94 60.6
Zm00001eb191190 Zea mays HOM05D000928 ORTHO05D000023 4.4e-25 118.2 87 63.2
Actinidia09558 Actinidia chinensis HOM05D000928 ORTHO05D000023 6.3e-24 114.4 100 61.0
Gohir.D08G207900 Gossypium hirsutum HOM05D000928 ORTHO05D000023 1.1e-23 113.6 65 80.0
Gorai.004G220300 Gossypium raimondii HOM05D000928 ORTHO05D000023 1.1e-23 113.6 65 80.0
SGA_v2.0_scaffold138G35249 Striga asiatica HOM05D003973 ORTHO05D004679 9.1e-23 110.5 114 51.8
vmacro14840 Vaccinium macrocarpon HOM05D000928 ORTHO05D000023 1.0e-21 107.1 205 37.1
Cfa002415 Carpinus fangiana HOM05D000928 ORTHO05D000023 4.2e-20 101.7 94 54.3
HPP92_013000 Vanilla planifolia HOM05D000928 ORTHO05D000023 7.2e-20 100.9 92 52.2
CDE06G2473 Ceratophyllum demersum HOM05D000928 ORTHO05D000023 1.2e-19 100.1 93 55.9
Haze_24612 Corylus avellana HOM05D000928 ORTHO05D000023 1.6e-19 99.8 79 62.0
Ah.11g049660 Amaranthus hybridus HOM05D000928 ORTHO05D000023 1.0e-18 97.1 120 46.7
SHI16954 Sapria himalayana HOM05D000928 ORTHO05D000023 3.0e-18 95.5 87 54.0
Haze_24610 Corylus avellana HOM05D000928 ORTHO05D000023 3.4e-17 92.0 86 55.8
VMungo0720G2989 Vigna mungo HOM05D000928 ORTHO05D000023 1.4e-15 86.7 48 83.3
SEGI_24893 Sequoiadendron giganteum HOM05D000928 ORTHO05D000023 2.4e-15 85.9 88 46.6
MD10G1185700 Malus domestica HOM05D000928 ORTHO05D000023 3.5e-14 82.0 54 72.2
Os03g0149400 Oryza sativa ssp. japonica HOM05D000928 ORTHO05D000023 2.2e-13 79.3 88 43.2
SalBow4G0137 Salvia bowleyana HOM05D000928 ORTHO05D000023 5.0e-13 78.2 69 56.5
HPP92_028102 Vanilla planifolia HOM05D000928 ORTHO05D000023 4.2e-12 75.1 45 77.8
Cfa002410 Carpinus fangiana HOM05D000928 ORTHO05D000023 9.4e-12 73.9 86 50.0
VMungo0720G2402 Vigna mungo HOM05D001807 ORTHO05D000002 2.3e-10 69.3 107 43.0
TAR374G1213 Trochodendron aralioides HOM05D000928 ORTHO05D000023 1.2e-09 67.0 48 70.8
Cfa002411 Carpinus fangiana HOM05D000928 ORTHO05D000023 5.4e-07 58.2 46 60.9


User provided reference genes

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