Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 3.3e-272 941.0 451 100.0
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 1.3e-140 503.8 352 69.9
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 5.1e-140 501.9 320 74.1
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 1.4e-137 493.8 353 70.3
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 1.8e-137 493.4 352 69.3
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 1.6e-133 480.3 320 71.9
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 6.0e-133 478.4 352 66.2
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 9.7e-131 471.1 348 67.2
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 1.3e-130 470.7 382 63.4
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 1.5e-128 463.8 353 64.9
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 2.6e-128 463.0 353 65.2
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 4.6e-125 452.2 352 65.1
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 6.1e-125 451.8 365 60.5
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 3.9e-124 449.1 354 63.0
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 6.7e-124 448.4 354 62.7
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 4.8e-122 442.2 352 64.2
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 6.3e-122 441.8 354 63.0
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 1.4e-121 440.7 352 61.6
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 2.4e-121 439.9 352 58.2
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 5.3e-121 438.7 360 60.8
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 5.3e-121 438.7 352 61.6
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.0e-120 436.8 354 62.7
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 3.4e-120 436.0 349 61.0
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 7.7e-120 434.9 356 57.6
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 2.2e-119 433.3 352 58.8
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 2.2e-119 433.3 297 69.4
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 3.8e-119 432.6 353 60.3
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 1.1e-118 431.0 365 59.5
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 1.1e-118 431.0 352 59.4
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 2.5e-118 429.9 391 57.3
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 1.2e-117 427.6 354 59.9
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 1.4e-116 424.1 327 63.0
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 2.3e-116 423.3 361 59.3
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 3.0e-116 422.9 361 59.6
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 3.0e-116 422.9 361 59.3
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 3.0e-116 422.9 348 60.1
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 1.5e-115 420.6 353 59.5
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 1.5e-115 420.6 358 58.7
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 2.6e-115 419.9 360 59.2
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 2.6e-115 419.9 358 58.4
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 5.7e-115 418.7 358 57.8
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 2.2e-114 416.8 356 60.1
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 2.8e-114 416.4 327 63.0
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 2.8e-114 416.4 371 57.1
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 8.2e-114 414.8 359 57.9
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 1.8e-113 413.7 335 60.3
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 3.1e-113 412.9 352 60.5
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 4.1e-113 412.5 322 60.9
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 1.2e-112 411.0 348 58.6
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 5.9e-112 408.7 348 59.5
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 7.7e-112 408.3 353 56.4
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 7.7e-112 408.3 352 58.5
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 8.5e-111 404.8 365 56.4
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 1.4e-110 404.1 361 56.5
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 1.9e-110 403.7 329 61.1
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 3.2e-110 402.9 329 60.5
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 1.6e-109 400.6 349 57.3
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 2.1e-109 400.2 351 57.0
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 4.7e-109 399.1 348 58.6
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 4.7e-109 399.1 329 59.9
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 4.7e-109 399.1 326 61.0
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 1.8e-108 397.1 361 53.5
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 3.9e-108 396.0 324 60.5
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 5.2e-108 395.6 368 54.3
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 5.2e-108 395.6 349 56.4
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 1.1e-107 394.4 333 59.8
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 2.6e-107 393.3 449 48.8
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 3.3e-107 392.9 355 53.8
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 9.7e-107 391.3 365 55.1
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 1.3e-106 391.0 342 57.0
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 1.3e-106 391.0 326 59.2
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 1.7e-106 390.6 363 53.4
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 2.2e-106 390.2 267 68.2
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 4.8e-106 389.0 352 57.1
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 1.1e-105 387.9 349 55.6
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 1.8e-105 387.1 322 58.4
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 3.1e-105 386.3 322 58.1
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 1.2e-104 384.4 355 54.4
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 1.6e-104 384.0 287 65.2
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 3.8e-103 379.4 360 53.6
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 6.5e-103 378.6 340 54.1
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 8.5e-103 378.3 335 57.6
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 8.5e-103 378.3 330 56.4
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 2.5e-102 376.7 332 53.6
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 4.2e-102 375.9 330 56.1
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 7.2e-102 375.2 345 53.9
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 9.4e-102 374.8 350 54.6
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 2.1e-101 373.6 346 52.9
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 1.0e-100 371.3 349 54.2
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 2.6e-99 366.7 333 56.8
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 3.3e-99 366.3 228 70.2
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 3.3e-99 366.3 219 72.1
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 3.3e-99 366.3 318 58.5
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 7.5e-99 365.2 219 72.1
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 7.5e-99 365.2 213 72.8
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 2.2e-98 363.6 213 73.2
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 2.2e-98 363.6 321 53.9
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 2.8e-98 363.2 339 53.4
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 4.8e-98 362.5 326 53.7
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 1.1e-97 361.3 323 54.2
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 1.4e-97 360.9 235 68.9
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 4.1e-97 359.4 229 69.9
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 1.2e-96 357.8 213 71.8
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 1.6e-96 357.5 213 71.4
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 2.7e-96 356.7 229 69.4
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 5.9e-96 355.5 286 61.2
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 7.7e-96 355.1 325 54.5
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.3e-95 354.4 323 58.2
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 1.7e-95 354.0 331 56.2
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 2.2e-95 353.6 433 45.0
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 6.8e-92 342.0 300 58.3
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 1.7e-90 337.4 320 53.4
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 2.8e-90 336.7 215 69.8
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 4.8e-90 335.9 320 53.4
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 5.4e-89 332.4 301 56.5
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 2.7e-88 330.1 300 53.7
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 1.0e-87 328.2 256 61.7
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 1.0e-87 328.2 331 52.3
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 1.7e-87 327.4 315 50.8
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 3.3e-86 323.2 327 50.2
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 5.5e-86 322.4 246 59.8
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 9.5e-86 321.6 302 55.3
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 2.8e-85 320.1 311 50.2
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.4e-84 317.8 346 48.0
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 1.8e-84 317.4 213 63.8
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 3.0e-84 316.6 301 52.2
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 4.0e-84 316.2 213 64.3
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.2e-83 314.7 352 50.9
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 3.4e-83 313.2 323 48.6
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 4.4e-83 312.8 317 51.7
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 3.1e-81 306.6 235 59.1
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 1.2e-80 304.7 294 53.1
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 5.9e-80 302.4 292 54.8
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 8.6e-79 298.5 304 50.7
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.8e-77 293.5 299 49.5
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 3.1e-76 290.0 180 72.2
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 9.2e-73 278.5 199 58.3
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 4.6e-72 276.2 341 46.0
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 3.0e-71 273.5 352 45.5
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 3.0e-71 273.5 290 49.3
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 3.9e-71 273.1 318 45.0
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 1.1e-70 271.6 306 48.0
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 1.1e-70 271.6 329 45.6
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 1.9e-70 270.8 315 45.1
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 1.6e-69 267.7 323 44.9
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 1.6e-69 267.7 326 44.2
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 4.7e-69 266.2 326 44.5
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 1.8e-68 264.2 318 44.7
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 1.2e-67 261.5 317 44.2
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 2.0e-67 260.8 324 45.1
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 2.6e-67 260.4 323 43.3
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 6.4e-66 255.8 326 43.9
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 1.1e-65 255.0 329 41.9
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.6e-64 251.1 313 43.8
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 6.6e-63 245.7 204 53.4
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 2.8e-61 240.4 214 50.0
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.4e-57 227.3 268 45.9
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 6.8e-52 209.1 234 41.5
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 7.6e-51 205.7 317 38.5
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 2.4e-49 200.7 322 37.6
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 2.5e-46 190.7 99 87.9
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 9.6e-46 188.7 129 62.8
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 1.4e-44 184.9 99 84.8
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 8.7e-39 165.6 92 78.3
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 1.2e-16 92.0 102 42.2
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 5.3e-12 76.6 37 83.8
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 2.6e-11 74.3 36 83.3
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 1.1e-06 58.9 31 87.1
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 1.5e-06 58.5 40 70.0
QL93p2025_0050 Quercus lobata HOM05D003920 ORTHO05D337666 1.5e-06 58.5 32 81.2
BolC8t49779H Brassica oleracea HOM05D003920 ORTHO05D017698 2.0e-06 58.2 39 69.2
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 2.0e-06 58.2 39 69.2
arahy.Tifrunner.gnm1.ann1.RPY2B8 Arachis hypogaea HOM05D004014 ORTHO05D031593 2.5e-06 57.8 33 78.8


User provided reference genes

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