Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1058 Trochodendron aralioides HOM05D005845 ORTHO05D007067 6.9e-60 233.8 120 100.0
TAR633G1228 Trochodendron aralioides HOM05D005845 ORTHO05D007067 1.3e-55 219.5 120 96.7
Nn2g13425 Nelumbo nucifera HOM05D005845 ORTHO05D007067 8.2e-37 157.1 117 69.2
MBI05_g35632_MAGBIO Magnolia biondii HOM05D005845 ORTHO05D007067 3.5e-35 151.8 120 69.2
Haze_20829 Corylus avellana HOM05D005320 ORTHO05D007922 7.7e-35 150.6 120 69.2
Gorai.009G405900 Gossypium raimondii HOM05D005845 ORTHO05D007067 1.7e-34 149.4 120 69.2
QL07p030115 Quercus lobata HOM05D005845 ORTHO05D007067 2.2e-34 149.1 119 68.9
QL07p030897 Quercus lobata HOM05D005845 ORTHO05D007067 2.2e-34 149.1 119 68.9
Sed0011119 Sechium edule HOM05D005845 ORTHO05D007067 2.9e-34 148.7 120 65.8
CSS0047206 Camellia sinensis var. sinensis HOM05D005845 ORTHO05D007067 6.5e-34 147.5 125 68.8
COL.COLO4_14759 Corchorus olitorius HOM05D005845 ORTHO05D007067 6.5e-34 147.5 120 66.7
ClCG10G021330 Citrullus lanatus HOM05D005845 ORTHO05D007067 8.5e-34 147.1 120 67.5
Gohir.D07G011900 Gossypium hirsutum HOM05D005845 ORTHO05D007067 8.5e-34 147.1 120 68.3
Gohir.A07G012100 Gossypium hirsutum HOM05D005845 ORTHO05D007067 1.4e-33 146.4 120 67.5
CiPaw.10G147000 Carya illinoinensis HOM05D005845 ORTHO05D007067 1.9e-33 146.0 120 65.8
Gohir.D04G102600 Gossypium hirsutum HOM05D005845 ORTHO05D007067 1.9e-33 146.0 120 68.3
Hma1.2p1_0936F.1_g238990 Hydrangea macrophylla HOM05D005845 ORTHO05D007067 2.5e-33 145.6 118 63.6
vmacro20178 Vaccinium macrocarpon HOM05D005845 ORTHO05D007067 2.5e-33 145.6 124 68.5
Gorai.001G012600 Gossypium raimondii HOM05D005845 ORTHO05D007067 3.2e-33 145.2 120 67.5
HanXRQChr02g0050481 Helianthus annuus HOM05D005845 ORTHO05D007067 9.4e-33 143.7 117 69.2
Duzib106G0947 Durio zibethinus HOM05D005845 ORTHO05D007067 1.2e-32 143.3 120 67.5
Lj3A964T57 Lonicera japonica HOM05D005845 ORTHO05D007067 1.2e-32 143.3 123 65.0
RcHm_v2.0_Chr3g0466071 Rosa chinensis HOM05D005845 ORTHO05D007067 1.6e-32 142.9 121 66.1
Manes.09G092274 Manihot esculenta HOM05D005845 ORTHO05D007067 2.1e-32 142.5 112 65.2
Rhsim05G0194900 Rhododendron simsii HOM05D005845 ORTHO05D007067 2.1e-32 142.5 115 65.2
TWI74G0153 Tripterygium wilfordii HOM05D005845 ORTHO05D007067 2.7e-32 142.1 120 64.2
GSVIVG01034129001 Vitis vinifera HOM05D005845 ORTHO05D007067 2.7e-32 142.1 126 62.7
Lsat_1_v5_gn_6_22520 Lactuca sativa HOM05D005845 ORTHO05D007067 3.6e-32 141.7 80 82.5
Prupe.6G259200 Prunus persica HOM05D005845 ORTHO05D007067 3.6e-32 141.7 120 65.8
ECA233G0482 Erigeron canadensis HOM05D005845 ORTHO05D007067 4.7e-32 141.4 79 83.5
Eucgr.K03081 Eucalyptus grandis HOM05D005845 ORTHO05D007067 4.7e-32 141.4 120 60.8
FAN02G1947 Fragaria x ananassa HOM05D005845 ORTHO05D007067 8.0e-32 140.6 121 63.6
Gohir.A04G065200 Gossypium hirsutum HOM05D005845 ORTHO05D007067 1.4e-31 139.8 123 65.9
MD04G1132800 Malus domestica HOM05D005845 ORTHO05D007067 1.4e-31 139.8 120 68.3
TWI77G0787 Tripterygium wilfordii HOM05D005845 ORTHO05D007067 1.4e-31 139.8 120 67.5
MD12G1145500 Malus domestica HOM05D005845 ORTHO05D007067 1.8e-31 139.4 125 65.6
FvH4_6g13240 Fragaria vesca HOM05D005845 ORTHO05D007067 2.3e-31 139.0 121 62.8
FAN14G4222 Fragaria x ananassa HOM05D005845 ORTHO05D007067 2.3e-31 139.0 121 62.8
Potri.006G088200 Populus trichocarpa HOM05D005845 ORTHO05D007067 3.0e-31 138.7 120 60.8
TAR369G0629 Trochodendron aralioides HOM05D005845 ORTHO05D007067 3.0e-31 138.7 97 75.3
Atru.chr8.2014 Acer truncatum HOM05D005320 ORTHO05D007922 3.9e-31 138.3 122 64.8
Cpa.g.sc3458.2 Carica papaya HOM05D005845 ORTHO05D007067 6.7e-31 137.5 88 75.0
Ciclev10013078m.g Citrus clementina HOM05D005845 ORTHO05D007067 6.7e-31 137.5 121 62.0
Cc06_g02340 Coffea canephora HOM05D005845 ORTHO05D007067 6.7e-31 137.5 124 66.1
PGR004G0892 Punica granatum HOM05D005845 ORTHO05D007067 8.8e-31 137.1 121 59.5
Aqoxy1G00879 Aquilegia oxysepala HOM05D005845 ORTHO05D007067 2.0e-30 136.0 120 64.2
DCAR_028759 Daucus carota HOM05D005845 ORTHO05D007067 2.0e-30 136.0 124 60.5
SalBow1G4544 Salvia bowleyana HOM05D005845 ORTHO05D007067 2.0e-30 136.0 80 80.0
SalBow7G2664 Salvia bowleyana HOM05D005845 ORTHO05D007067 2.0e-30 136.0 80 80.0
AUR62018118 Chenopodium quinoa HOM05D005845 ORTHO05D007067 3.3e-30 135.2 76 86.8
CsaV3_3G034730 Cucumis sativus L. HOM05D005845 ORTHO05D007067 3.3e-30 135.2 122 64.8
Eucgr.K03092 Eucalyptus grandis HOM05D005845 ORTHO05D007067 3.3e-30 135.2 113 60.2
Lalb_Chr03g0042411 Lupinus albus HOM05D005845 ORTHO05D007067 3.3e-30 135.2 123 61.8
Nitab4.5_0003394g0030 Nicotiana tabacum HOM05D005845 ORTHO05D007067 4.4e-30 134.8 118 66.1
Nitab4.5_0000705g0030 Nicotiana tabacum HOM05D005845 ORTHO05D007067 5.7e-30 134.4 119 66.4
Peaxi162Scf00527g00733 Petunia axillaris HOM05D005845 ORTHO05D007067 5.7e-30 134.4 121 66.1
AUR62034449 Chenopodium quinoa HOM05D005845 ORTHO05D007067 3.7e-29 131.7 116 64.7
PSO513G0176 Papaver somniferum HOM05D005845 ORTHO05D007067 3.7e-29 131.7 84 77.4
Sc01g0004490 Simmondsia chinensis HOM05D005845 ORTHO05D007067 3.7e-29 131.7 76 81.6
Thecc.05G035600 Theobroma cacao HOM05D005845 ORTHO05D007067 3.7e-29 131.7 120 63.3
Os05g0292800 Oryza sativa ssp. japonica HOM05D005845 ORTHO05D007067 4.8e-29 131.3 79 78.5
CANSAT35G1952 Cannabis sativa HOM05D005845 ORTHO05D007067 6.3e-29 131.0 119 60.5
Migut.L01960 Erythranthe guttata HOM05D005845 ORTHO05D007067 8.2e-29 130.6 82 76.8
Psat3g137040 Pisum sativum HOM05D005845 ORTHO05D007067 8.2e-29 130.6 118 61.0
Rhsim04G0158900 Rhododendron simsii HOM05D005845 ORTHO05D007067 8.2e-29 130.6 139 59.0
Glyma.07G135300 Glycine max HOM05D005845 ORTHO05D007067 1.1e-28 130.2 118 58.5
THA.LOC104816255 Tarenaya hassleriana HOM05D005845 ORTHO05D007067 1.1e-28 130.2 112 63.4
Sabra06G0067200 Salix brachista HOM05D000102 ORTHO05D004225 1.8e-28 129.4 112 62.5
VMungo1383G2075 Vigna mungo HOM05D005845 ORTHO05D007067 1.8e-28 129.4 117 61.5
Lj1g0012131 Lotus japonicus HOM05D005845 ORTHO05D007067 2.4e-28 129.0 84 76.2
SEGI_39626 Sequoiadendron giganteum HOM05D005845 ORTHO05D007067 2.4e-28 129.0 88 73.9
ATR0559G337 Amborella trichopoda HOM05D005845 ORTHO05D007067 3.1e-28 128.6 73 86.3
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 3.1e-28 128.6 79 78.5
FAN05G4617 Fragaria x ananassa HOM05D005845 ORTHO05D007067 4.1e-28 128.3 121 60.3
Medtr7g062970 Medicago truncatula HOM05D005845 ORTHO05D007067 4.1e-28 128.3 121 59.5
arahy.Tifrunner.gnm1.ann1.CX8U58 Arachis hypogaea HOM05D005845 ORTHO05D007067 5.3e-28 127.9 117 61.5
arahy.Tifrunner.gnm1.ann1.1Q4DHH Arachis hypogaea HOM05D005845 ORTHO05D007067 7.0e-28 127.5 115 60.0
EL10Ac2g03022 Beta vulgaris HOM05D005845 ORTHO05D007067 7.0e-28 127.5 117 63.2
PSO339G6396 Papaver somniferum HOM05D005845 ORTHO05D007067 7.0e-28 127.5 124 58.9
arahy.Tifrunner.gnm1.ann1.D19TT3 Arachis hypogaea HOM05D005845 ORTHO05D007067 9.1e-28 127.1 120 59.2
CAN.G597.2 Capsicum annuum HOM05D005845 ORTHO05D007067 1.6e-27 126.3 117 61.5
Solyc09g011010.3 Solanum lycopersicum HOM05D005845 ORTHO05D007067 1.6e-27 126.3 119 61.3
BcaC05g29521 Brassica carinata HOM05D005845 ORTHO05D007067 2.0e-27 125.9 112 65.2
BcaC05g29660 Brassica carinata HOM05D005845 ORTHO05D007067 2.0e-27 125.9 76 84.2
C05p58690 Brassica napus HOM05D005845 ORTHO05D007067 2.0e-27 125.9 76 84.2
BolC5t34518H Brassica oleracea HOM05D005845 ORTHO05D007067 2.0e-27 125.9 76 84.2
A05p39650 Brassica napus HOM05D005845 ORTHO05D007067 2.6e-27 125.6 112 65.2
BraA05t22747Z Brassica rapa HOM05D005845 ORTHO05D007067 3.5e-27 125.2 112 65.2
Phvul.008G118000 Phaseolus vulgaris HOM05D005845 ORTHO05D007067 3.5e-27 125.2 120 56.7
PGSC0003DMG400008901 Solanum tuberosum HOM05D005845 ORTHO05D007067 3.5e-27 125.2 120 62.5
CARHR083690 Cardamine hirsuta HOM05D005845 ORTHO05D007067 4.5e-27 124.8 117 59.0
arahy.Tifrunner.gnm1.ann1.1BNP0N Arachis hypogaea HOM05D005845 ORTHO05D007067 5.9e-27 124.4 119 58.8
Sopen09g005730 Solanum pennellii HOM05D005845 ORTHO05D007067 7.7e-27 124.0 119 60.5
Zm00001eb299980 Zea mays HOM05D005845 ORTHO05D007067 7.7e-27 124.0 76 76.3
Aa31LG3G1810 Aethionema arabicum HOM05D005845 ORTHO05D007067 1.0e-26 123.6 73 83.6
AL6G11350 Arabidopsis lyrata HOM05D005845 ORTHO05D007067 1.3e-26 123.2 84 76.2
Carub.0006s0096 Capsella rubella HOM05D005845 ORTHO05D007067 1.3e-26 123.2 76 80.3
CARHR211240 Cardamine hirsuta HOM05D005845 ORTHO05D007067 1.3e-26 123.2 76 80.3
Ca_07339_v3 Cicer arietinum L. HOM05D005845 ORTHO05D007067 1.7e-26 122.9 118 57.6
Sp6g40320 Schrenkiella parvula HOM05D005845 ORTHO05D007067 1.7e-26 122.9 112 61.6
AL3G20470 Arabidopsis lyrata HOM05D005845 ORTHO05D007067 2.2e-26 122.5 76 80.3
Eucgr.G01508 Eucalyptus grandis HOM05D005845 ORTHO05D007067 2.2e-26 122.5 142 50.0
Eucgr.K03089 Eucalyptus grandis HOM05D005845 ORTHO05D007067 2.9e-26 122.1 111 59.5
Sp3g07700 Schrenkiella parvula HOM05D005845 ORTHO05D007067 2.9e-26 122.1 117 59.0
Actinidia11275 Actinidia chinensis HOM05D005845 ORTHO05D007067 8.5e-26 120.6 99 68.7
A03p00540 Brassica napus HOM05D005845 ORTHO05D007067 8.5e-26 120.6 74 79.7
BraA03t09444Z Brassica rapa HOM05D005845 ORTHO05D007067 8.5e-26 120.6 74 79.7
Carub.0003s0843 Capsella rubella HOM05D005845 ORTHO05D007067 8.5e-26 120.6 76 77.6
AT5G02120 Arabidopsis thaliana HOM05D005845 ORTHO05D007067 1.5e-25 119.8 116 59.5
Thhalv10015070m.g Eutrema salsugineum HOM05D005845 ORTHO05D007067 1.5e-25 119.8 116 59.5
BcaB01g06068 Brassica carinata HOM05D005845 ORTHO05D007067 1.9e-25 119.4 112 58.0
C03p00800 Brassica napus HOM05D005845 ORTHO05D007067 1.9e-25 119.4 112 58.0
BolC3t12643H Brassica oleracea HOM05D005845 ORTHO05D007067 1.9e-25 119.4 112 58.0
Os12g0480100 Oryza sativa ssp. japonica HOM05D005845 ORTHO05D007067 4.2e-25 118.2 79 68.4
BcaB01g06213 Brassica carinata HOM05D005845 ORTHO05D007067 7.2e-25 117.5 112 58.9
MELO3C009241.2 Cucumis melo HOM05D005845 ORTHO05D007067 4.7e-24 114.8 153 51.6
CDE06G2558 Ceratophyllum demersum HOM05D000816 ORTHO05D009154 8.0e-24 114.0 88 65.9
Lalb_Chr01g0022631 Lupinus albus HOM05D005845 ORTHO05D007067 1.8e-23 112.8 119 53.8
Dinv35574 Davidia involucrata HOM05D005845 ORTHO05D007067 2.3e-23 112.5 98 63.3
Zm00001eb090340 Zea mays HOM05D005845 ORTHO05D007067 1.5e-22 109.8 64 79.7
Eucgr.K03094 Eucalyptus grandis HOM05D005845 ORTHO05D007067 2.0e-22 109.4 68 76.5
Oeu023072.1 Olea europaea HOM05D005845 ORTHO05D007067 4.8e-21 104.8 59 84.7
Pp3c18_21050 Physcomitrium patens HOM05D005845 ORTHO05D007067 1.1e-20 103.6 73 67.1
Pp3c22_8010 Physcomitrium patens HOM05D005845 ORTHO05D007067 2.4e-20 102.4 72 65.3
AagrBONN_evm.TU.Sc2ySwM_344.1593 Anthoceros agrestis HOM05D005845 ORTHO05D007067 4.1e-20 101.7 79 62.0
HPP92_019240 Vanilla planifolia HOM05D005845 ORTHO05D007067 1.2e-19 100.1 82 62.2
SEGI_14936 Sequoiadendron giganteum HOM05D005845 ORTHO05D007067 5.9e-19 97.8 67 73.1
Mapoly0151s0005 Marchantia polymorpha HOM05D005845 ORTHO05D007067 2.9e-18 95.5 71 62.0
Eucgr.K03086 Eucalyptus grandis HOM05D005845 ORTHO05D007067 3.8e-18 95.1 97 55.7
Eucgr.G00292 Eucalyptus grandis HOM05D005845 ORTHO05D007067 8.5e-18 94.0 53 84.9
Zm00001eb372120 Zea mays HOM05D005845 ORTHO05D007067 2.5e-17 92.4 54 79.6
CBR_g4596 Chara braunii HOM05D005845 ORTHO05D007067 5.2e-15 84.7 73 57.5
Rhsim04G0160800 Rhododendron simsii HOM05D005845 ORTHO05D007067 1.5e-14 83.2 140 45.0
TPR.G22204 Trifolium pratense HOM05D000026 ORTHO05D007067 4.4e-14 81.6 108 48.1
Glyma.18G185300 Glycine max HOM05D005845 ORTHO05D007067 1.7e-13 79.7 117 42.7
TPR.G34843 Trifolium pratense HOM05D005845 ORTHO05D007067 4.8e-13 78.2 47 76.6
Cre02.g109950 Chlamydomonas reinhardtii HOM05D005845 ORTHO05D007067 6.1e-08 61.2 88 43.2


User provided reference genes

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